Basic Information

Insect: Belonocnema treatae
Gene Symbol: -
Assembly: GCA_010883055.1
Location: NC:65097518-65102614[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.037 1.4 9.1 0.7 3 21 88 106 88 107 0.95

2 16 0.75 29 5.0 0.1 7 23 128 145 128 145 0.92

3 16 1.9e-06 7.5e-05 22.6 1.5 1 23 151 173 151 173 0.96

4 16 2.7e-07 1.1e-05 25.3 0.6 1 23 180 202 180 202 0.99

5 16 0.0061 0.24 11.6 0.5 1 23 208 230 208 230 0.97

6 16 0.0014 0.057 13.6 0.9 2 23 252 273 251 273 0.96

7 16 0.0018 0.07 13.3 3.4 1 21 279 299 279 301 0.96

8 16 1.1e-05 0.00042 20.3 0.8 1 23 307 329 307 329 0.95

9 16 1.4e-05 0.00056 19.9 0.2 1 23 335 357 335 357 0.98

10 16 0.004 0.16 12.2 0.7 1 23 363 385 363 385 0.97

11 16 0.00022 0.0088 16.1 0.6 1 23 391 413 391 413 0.98

12 16 5.6e-05 0.0022 18.0 5.9 1 23 419 441 419 441 0.98

13 16 0.00031 0.012 15.7 1.3 1 23 447 469 447 469 0.96

14 16 4.9e-06 0.00019 21.3 0.1 1 23 476 498 476 498 0.99

15 16 9.8e-05 0.0039 17.2 3.6 2 23 509 530 508 530 0.98

16 16 0.00053 0.021 14.9 0.9 1 23 535 557 535 557 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.037	1.4	9.1	0.7	3	21	88	106	88	107	0.95
2	16	0.75	29	5.0	0.1	7	23	128	145	128	145	0.92
3	16	1.9e-06	7.5e-05	22.6	1.5	1	23	151	173	151	173	0.96
4	16	2.7e-07	1.1e-05	25.3	0.6	1	23	180	202	180	202	0.99
5	16	0.0061	0.24	11.6	0.5	1	23	208	230	208	230	0.97
6	16	0.0014	0.057	13.6	0.9	2	23	252	273	251	273	0.96
7	16	0.0018	0.07	13.3	3.4	1	21	279	299	279	301	0.96
8	16	1.1e-05	0.00042	20.3	0.8	1	23	307	329	307	329	0.95
9	16	1.4e-05	0.00056	19.9	0.2	1	23	335	357	335	357	0.98
10	16	0.004	0.16	12.2	0.7	1	23	363	385	363	385	0.97
11	16	0.00022	0.0088	16.1	0.6	1	23	391	413	391	413	0.98
12	16	5.6e-05	0.0022	18.0	5.9	1	23	419	441	419	441	0.98
13	16	0.00031	0.012	15.7	1.3	1	23	447	469	447	469	0.96
14	16	4.9e-06	0.00019	21.3	0.1	1	23	476	498	476	498	0.99
15	16	9.8e-05	0.0039	17.2	3.6	2	23	509	530	508	530	0.98
16	16	0.00053	0.021	14.9	0.9	1	23	535	557	535	557	0.98

Sequence Information

Coding Sequence: atgaaaaaattgaaaagcaaaatgaatgtcaaaaataataatgcaaaactTAAGttGTTATCAAAACACGAAGAAGATTCATGGAACAGCGTTTTTATCAAATCTGAGGCTCCAGCATATAATTCAGTTGACGAAAAGGAAAAGTTGAAAGGACAACAGAACGTGTTAAACAATATGCCTACCAAAGACCAcaagaattttccaaaacaaaaagtAGATGCTTTGAAATtacctataaaaaaaatacaaaatcttcATTGGTGCAGCCTTTgtgaaaaagaattcaaaacagaCCAAAAATTGAGGGACCACATACATATTTGCAGTCCGAGTCTCGAAAGTGGTCATACAACTCCTACCGACCGAAAACATTACAAATCCAACAAGCCttttaaaatacaatacaaaCTTCAGAAGCACGTAAACTCggttcacttaaaaaataaatcctttgAATGCGATATTTGCAAAAAAACGTTTACGAATCACTCTAATATGAAAATTCACATAATTGCCCATATGCAAGGCAGAAAACCTTACAAGTGTCCAGTTTGTGCAAAAGTTTTTGTCAGGTCATATAGTTTAAAGGAACACTTGAAAACTCACACAGACATTCAACCTTTCGTGTGTGAAATTTGTAGAGATGGTTTTGTAAGAGAGAATGATTTAAAGACACATTTGCATATTCACGAAAACAAAAAACGTTCTATAGAGGTCACTAAGAAATCAATCCTTTCAAAAAGAAAACGTGTTGTTTGTGATGTTTGTTCGAGTACTTTCATATCACAATCTCATCTAGACAAGCATAAAAGTATTCATTCCGCCAAAAAACTCTACCAATGTAAAACCTGTGGAAATAAATTTAGCAATATAACTAAACTTAATATTCATATACGTTGTCACACTGGAAAGAAGCCTTTCGAGTGCGACATCTGTAACAAGAAATTCACAAATCGTCGTAATATGAAATTACATATAGTTGCTCATATGACTGGTCCACGTCACAAATGTCCGGTTTGTGCTCAAGGTTTTGTGAGATCCGACGGTTTAGTTGTACATATGCGAAAACACACGAAAAGTAAACCCTTTGAATGTGAATTTTGCAAGAAAGGGTTTTTAAGAAATACAGATTTAATTGCACATCGGTTCATCCATACGAACACAAAACCTTTTGTTTGTGACGTTTGTTCTAAAGGTTATCTACGGCTGTCCAATCTGACTGTTCACAAAAGGACACACTTGGATGAAATGCCTCACAAATGTAAAACCTGCAAAAAAAGGTTTATCAGAATACATGATCTTAATCTTCACATGCGCGTCCACACTGGAGAAAAGCCTTTCAAGTGtgatatttgtaagaaaaaatttgcaaatcgTCGTTTTATGAAAGTGCACGTACTTGCTCACATGGAAGATGACGAGCCGTACAAGTGTGGAGTTTGTGAGGAAGGTTTTGTAACTTCGGACACTTTAGAGCTCCACATGCAAACCCATCGAGGATGCAAATCCTTTGAGTTGCCCAACAAGTGTGAAACATGTGAAGAAAGGTTTAGAACGACAAATCAACTTCATATTCATATGCGCACTCACATTAGAGGAAATTTTGAGTGCGATATTtgtaaaaagaatctgaaatatgccgaatctttaaaattgcacaaaatgTCGCATATGAAACCTAGTAAACGTACAAATATGAAAATAAGTCAGCAGAAAATAGATTTCGAAACGGTCTTTTTGAATGCTCATGTGGAGAATAGTAACTCGAAGTGTCATAAGACAAATCTGAATAGAATGAAGAAGTGTGAAAATCCTACTTTATTACCTGTAAAAAACGAATTTAGCGAAGGAGTAGATTTAAGTTGTGACATAGAATTTGAAGATGTAAAAATAGAAGTGGAGGAATGA
Protein Sequence: MKKLKSKMNVKNNNAKLKLLSKHEEDSWNSVFIKSEAPAYNSVDEKEKLKGQQNVLNNMPTKDHKNFPKQKVDALKLPIKKIQNLHWCSLCEKEFKTDQKLRDHIHICSPSLESGHTTPTDRKHYKSNKPFKIQYKLQKHVNSVHLKNKSFECDICKKTFTNHSNMKIHIIAHMQGRKPYKCPVCAKVFVRSYSLKEHLKTHTDIQPFVCEICRDGFVRENDLKTHLHIHENKKRSIEVTKKSILSKRKRVVCDVCSSTFISQSHLDKHKSIHSAKKLYQCKTCGNKFSNITKLNIHIRCHTGKKPFECDICNKKFTNRRNMKLHIVAHMTGPRHKCPVCAQGFVRSDGLVVHMRKHTKSKPFECEFCKKGFLRNTDLIAHRFIHTNTKPFVCDVCSKGYLRLSNLTVHKRTHLDEMPHKCKTCKKRFIRIHDLNLHMRVHTGEKPFKCDICKKKFANRRFMKVHVLAHMEDDEPYKCGVCEEGFVTSDTLELHMQTHRGCKSFELPNKCETCEERFRTTNQLHIHMRTHIRGNFECDICKKNLKYAESLKLHKMSHMKPSKRTNMKISQQKIDFETVFLNAHVENSNSKCHKTNLNRMKKCENPTLLPVKNEFSEGVDLSCDIEFEDVKIEVEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -