Basic Information

Gene Symbol
ZNF236
Assembly
GCA_010883055.1
Location
NC:71967004-72050092[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 0.00047 0.018 15.1 3.9 2 23 187 208 186 208 0.96
2 28 6e-05 0.0023 17.9 0.6 1 23 214 236 214 236 0.98
3 28 3.3e-06 0.00013 21.9 0.4 2 23 242 263 242 263 0.98
4 28 0.012 0.47 10.7 0.2 3 23 271 291 269 291 0.96
5 28 0.00018 0.007 16.4 2.9 2 23 302 323 302 323 0.98
6 28 1.1e-06 4.1e-05 23.4 1.3 1 23 344 366 344 366 0.99
7 28 8.3e-06 0.00033 20.6 1.8 1 23 372 394 372 394 0.98
8 28 0.0006 0.024 14.8 2.1 1 23 400 423 400 423 0.95
9 28 0.31 12 6.2 5.0 1 23 432 455 432 455 0.97
10 28 1.8e-06 6.9e-05 22.7 1.5 1 23 565 587 565 587 0.98
11 28 0.0018 0.069 13.3 1.4 1 23 593 615 593 615 0.98
12 28 0.00016 0.0064 16.6 0.6 1 23 621 643 621 643 0.97
13 28 0.0011 0.044 13.9 6.0 1 21 647 667 647 669 0.95
14 28 0.011 0.44 10.8 9.1 1 23 724 746 724 746 0.98
15 28 1.1e-05 0.00042 20.3 3.8 1 23 752 774 752 774 0.99
16 28 0.001 0.041 14.0 5.0 1 23 780 802 780 802 0.97
17 28 0.00017 0.0068 16.5 7.4 1 23 808 830 808 830 0.98
18 28 0.26 10 6.5 0.1 2 23 1143 1164 1142 1164 0.93
19 28 0.0019 0.075 13.2 2.2 2 23 1209 1230 1208 1230 0.97
20 28 0.00077 0.03 14.4 2.2 1 23 1236 1258 1236 1258 0.98
21 28 0.015 0.59 10.4 0.1 1 23 1264 1286 1264 1286 0.97
22 28 2.4e-07 9.4e-06 25.5 2.3 2 23 1358 1379 1357 1379 0.98
23 28 0.43 17 5.8 5.6 1 23 1385 1407 1385 1407 0.97
24 28 5.8e-05 0.0023 18.0 2.3 1 23 1413 1435 1413 1435 0.98
25 28 0.00015 0.006 16.6 1.9 1 23 1441 1463 1441 1463 0.98
26 28 6.3e-05 0.0025 17.8 1.0 2 23 1674 1695 1674 1695 0.97
27 28 0.0001 0.0039 17.2 2.9 1 23 1701 1723 1701 1723 0.98
28 28 2.4e-05 0.00093 19.2 3.0 1 23 1729 1752 1729 1752 0.96

Sequence Information

Coding Sequence
ATGTTGACATCACGGACTGTTGGTAATTCAACAGCCATGGCACCCACCATGGACACCATGGATTCAATACCCTTGAGTTTTATCCTTTCTGATGATGGGGGAACTCTTCTTGCCGTGACAGAAACCGGAGATGGTACAATTGAGTTGATGAGTACGCCGATAACTTTCATAAACGACACGAACGAAATTTCCGTCGCTTCCAAAACGGCTAACGACAATCCAGAATCAAATATAtcACTACTGCAATTCAATTTGGGAGGAATTTCGGGATCAAGAACCCAACAAGCAACTTTGCTTCCTACAAACATGATCTCCTTCATTTCAAATGATTCCAATTTGATTCCAACCATTCCTACAAAAGAAGATCAATCTCCAGTCGGTTATCAAATATCTCAATACCAACCTATCAGAGCGAAACCAGACACGTcttccaaagaattttcttcGACACCTGTTATGTCTCCAGTATCCAAGTCTTCCAAATCTCAGTTGAAATCTCCGAAGAGAAGTCCTGGCAGGCCGAAGAAAAGTGAAAAGTCTCTTagaAAGATTGAATTAAAATGCGAAATTTGTGGCGAGGACTTTAAGAAGCACAGTTTATATCGAAGGCATATGGAACATCATGCAGAGGAAAAGCCGCACCGGTGTCCAAAGTGTCCCGCATCATTTAATGTGCCAACGAATTTTACACTTCACATGGCGACACACAACATTGGCGAGCCAAAATGTCCCGAATGTGGAAAAAAATTTGCGAGAATGGCGAGTTTAAAATCCCACATGATGCTGCACCAGAGAGAGGAAAATCTTTTCTGCACCGAGTgcgaagatgcattttcaacaaagGCTCAACTCGACGCTCATCTAAAACTTCACAACGAAAAATGGACGACCGAAGATGCCAGGAAGTGCAAGCTTTGCCACAAACAGTTTACTCAGCCGGCTTTGTACAGGCAACATATTCGAGAACACTACAGGTTGCAGACGAAGCTGATGAAGCAGACGAAGAGGGGGGCCAGACACAAGACAATGTACAAGTGCAAAATATGTCTCAAGTCTTTCCAAAAACCGAGCCAGCTGATGAGACATATCAGAGTTCACACAGGAGAGAAACCATTCAAGtgTACGGTTTGTAGCAGAAGATTCACACAAAAAGGCTCACTTCAAATTCACATGTCGCAACACGATGGACTCAGGCCACATGCTTGTGACTTTTGTAGTGCGAGATTCAGCCAAAAAGGAAACCTAAACGCCCACATCCACAGGGTGCATAATCTACCGGATGAGGGTCAGATATATGCATGCACTTATTGCTGCTGTGCCTTCAAAAAACTAGGCAGTTTGAATGCACATTTGAAAAGAAGACACGCACTTCCCATTGAGgaagaaaatccaaaatgtgATAGTTCGACGTCAGACGCAGATATGCAGGCAACTGTGGAAAATGTTATGTCACAGCTTGCTTCTCTTGAATCTGAGGTTAAAAATCACGCGGATTCAACTGAAAAGGATACTAATGATATTTTGCAACAGGCTTTGCAAAATAGCGGATTGCCAAGCAAAGAAAAAGATGctgaagagGCTAAAAAGTCTAAGGGACGAACAATGATGGTCACATTATTAGACCGAAATTCAGATGGCGATGCCAGaaaatatgtgACAATCAAACAGCGGCATGTTGGCGACATGTTATGGTTTACTTGCACCTTTTGCCAGAAAGAGTTTAAAAAGCCATCGGATCTCATAAGACATTTACGAATTCACACGCAAGAAAAACCATTTAGGtGTTCGTACTGCAGTCGCACTTTTGCCTTAAAATCAACAATGGTGGGCCATGAACGCACGCATTCTGTCACCAAGAAATTTCCATGCGGATCGTGcgaacatgtattttcaactcgGAGTAGTCTTACAGCTCACGCCaggTTGCATACGAGGGCCTTTATGTGCAGCATTTGTAAGAAGTGTTTCAGTGGAAGttccttgttaaaaaatcacatcAAGTGTCACTCAAAGCCGAAAACGAAAATATCTCCAGAGGTGGAAAGTCTTGTTCCCCAGATCATTTTAAAGGAACCGTTGCTTATCAGTGATGCCGGGAATAAAATTAGCGTAGCTCAAGTAAAATCAAAAAAGCAGCAAGTCTACGAAAGTGGAGATACAGCGAGGCCCCACAAATGTACGATGTGCAGTGCTGCCTTTAGAAAAACGAGTCACTTGAAACAACACCATCGAAGACACACTGGAGAAAAGCCTTACAAGTGTCCGAAATGTGACAGGAGATTCACTTCGAACAGCGTTTTGAAGTCGCATTTGCACACTCACGAGGATGCGAGACCGCACAGTTGTTCTGTCTGCAATGCAAAATTTACAACTCATAGTAGCATGAAGAGACACCTAATTACACACAGCAATAAAAGGCCTTTCATGTGCCCCTACTGCCATAAAACCTTCAAAACTTCTGTAAACTGTAAAAAACATATGAAAATCCACAAGGCAGAATTGGCTCTACAGCAAGTGGAAAAGCAAAAAATGCAGTCGAAAGTTGTCATGATTGTGGACAATCCGAAAGAGATTCCAGAGTATAAAAAGGAAGATTCGGTACCTGAAACTTTCGCTTTAGGGGATGAAATTACAGTGCCATTTCAGACTCAGCCTGTTGATTTTACAGATAACTTTTCTGGTCAGTATGAGCCCATTGCGGTGCAGGATAAAGACAAAATCCACATTCCACTTTCTGTCGCGAACAATATCGTCCATGAAAATGTCCTGCATGTTAGCAGTGTGAATCTAGGAACTACACAAACATTACATGCTGATGAAACGGGGACGATTACTCTACCAAATTATGCTGGAGAACACACACTTAGTGCGgagAGTATCCGCGAAATAGAAGAAACCTTAAACCAGCAGCTCTTTAATATTGGAATGAATCTCGAATTAGGAAACCCAGTATCAAAACAAACTGAAACAAATTCTTCTCTCGACTCGAGAAATCAGACCGTCCTCAATATTATTTATGATAGTGATAAGGCCTTAGAACCTGTTAGAAATAACGAAAATACTCATATATTCACACCACAATTTGAACCATTCGGCATGGGTCAGATTTCCTTacagACAAACGGAGACATGGATGTTGGAATCGAATCGGGCAAGACGACTAGCATGGCAAATATTTTGCCCAGTTCTGTGCAAGAAAAGCAACATTTGTCTATTCCAGCGACAACTGGATCTGTAGAAATTACTCAGAAACCACTCAAGCATTTAATGGTTGTTAGTCCAATGCAAACACGTCCCGAACTTTTGAGGCCGGTTCAAGCTTGCAAAAAGTATTCGAAAATTATTGCCAAGGCTGATACAACTAACGCGACTGAAGTTCAGATTCTTGAAAATGATTCCAAAGTGGAGGAGGTGAATGTCAGCATATCatgcaCAATATGTAACAAACTATTCGAAAAAGAATTGGATTTGATATATCATGTCGAGGAACACATCGCTTCAGCCACAAAAGTAACGCAATCCGCTAAAATTAATTCAATCGGATCTACTGCTCTGCTGCATATTAATTCACCAACGAAAACTTCTGAACCCGACCAGAATTCAATCGAATCGAATCCTTTGCTCCAGTGTCACATGTGCAGGAAAAACGGTTTCACAGCTTCCGAATTGAAGGAACATTTGAGGACTCATCAGGGCGAGAAGGAGTTTGAATGCATGGAATGTTCACTGAAATTCTGCACTAATGGTGGATTGAGTAGACACTTGAAAATGCACGCCGCCAGGCAACAATATAGATGTATCATATGCGACAAAGTATTACCGAATAAAGTACAAATGGAAGTTCACCTTCGAGGACACAATGAATTATTTGCTGGTGTCGCGGAAGCCGATAGTTCAGAAAAAGAATCGCTTCCTGTAGAGATCAAATTTCAGGAGGTTTCTGATGATAAAAATCCATCGAATACAGACGCGAAGATATCGGAACAAATTTTGTTGGACTCTGCAGAAATTATGGAAAGACTTAagCTTCAGAGTATGGTGGGCAAGGAAGAAAAGAAACCAGAGAAGAATAAATGCAAATTTTGCCCTAAGACCTTCCGGAAACCTAGTGATCTCACAAGGCACATTCGAACTCACACGGGTGAAAGGCCTTACCAGTGCCAATTTTGCAGCAAGAGTTTCGCAGTCAAATGCACACTCGATTGTCACATGCAAGTTCACAGTGGGAAGAAAACTTTCAGTTGTCACGTTTGCAACAGTTTCTTTGCGACAAAGGGAAGTTTGAAGGTGCACATGAGGTTGCACACAGGTTCGAAACCCTTCAGATGTCCAGTTTGTGACATGCGATTCCGCACCTCAGGTCATCGAAAAGTGCACCTCTTGTCTCACGTGAGAGAGCAGAAAGAGAACAAGCCCCGGAAAACGAAGCAGAGAAAAATCGCAGCAATCGCAAGTGTCGTCGCGGATGTGGAGAACGCGATTGAGTCAGTCGCCACCGAAACCAACCGAGTTGAAGAACCTTCAGCGGAGGAAACCGAATTCTCGAATGTAGACACAGTTACCATTGACGCCTCCGCTCTCACCGATCAAATCACCTTCAATCCAGATGGAACCGTTTTAAACAACAACTCTGTCCTCTCTGTTAGCGAGAGCAATCAGCTCGTAGCCAATTTGCATTTTCTACTTGCCAACGGTCTCATGACAATCCAACCTGACGGATTCGTGACATTCCCGGACTCTGTTCTTCCCGGATTAGCCAATTTGCAATTGGAGACATCCCAGGGCGATTTTCTTGCGTCCGCCGACTCGGAGAATGTGATCATCACTCAGGAGCCGCATTCCATTGATTTGGAACAATCAGGGTTCTTGAACTGCACCGCAGTTTTACAAGTCGAGGACAATGGAACGGTTTTTAATTCCAGTATTACTAATCCTAATATGGCAAATCCCAACGTCTTGAATTCCAGTATTCCGAATTCGACTGGGTTTCGAAATTCGAAGGGTGGACCGCCAAGGCGAGAGTGTGACATTTGCGGCAAGGTCTTTACGAAACCTTGTCAGGTCGCAAGACACAAGAGGATCCACACTGGCGAGCGGCCGTTTAAATGTGAGCGTTGCGACAAAGCCTTCGCCCAGAAGAATACTCTCATAATGCACCAAAAGCACCACACGGGAGATCGGCCTCACAATTGTCCCTTCTGCACTTACTCGTTTTCGCAGAAGGGCAATTTGCAGACGCATCTCAAGCGAGTTCATAAACAGGAGTCGCTCGAGGGGAAGAAATTGTGGAAGGGAGAGCAGCAGCCACCGAAATTTGTGCAGGAGGGCACAGTCGATAACAGAATTTTGGGCCTTGACGATATCTCGCTTGTCGAGCTTTTGAAGTAA
Protein Sequence
MLTSRTVGNSTAMAPTMDTMDSIPLSFILSDDGGTLLAVTETGDGTIELMSTPITFINDTNEISVASKTANDNPESNISLLQFNLGGISGSRTQQATLLPTNMISFISNDSNLIPTIPTKEDQSPVGYQISQYQPIRAKPDTSSKEFSSTPVMSPVSKSSKSQLKSPKRSPGRPKKSEKSLRKIELKCEICGEDFKKHSLYRRHMEHHAEEKPHRCPKCPASFNVPTNFTLHMATHNIGEPKCPECGKKFARMASLKSHMMLHQREENLFCTECEDAFSTKAQLDAHLKLHNEKWTTEDARKCKLCHKQFTQPALYRQHIREHYRLQTKLMKQTKRGARHKTMYKCKICLKSFQKPSQLMRHIRVHTGEKPFKCTVCSRRFTQKGSLQIHMSQHDGLRPHACDFCSARFSQKGNLNAHIHRVHNLPDEGQIYACTYCCCAFKKLGSLNAHLKRRHALPIEEENPKCDSSTSDADMQATVENVMSQLASLESEVKNHADSTEKDTNDILQQALQNSGLPSKEKDAEEAKKSKGRTMMVTLLDRNSDGDARKYVTIKQRHVGDMLWFTCTFCQKEFKKPSDLIRHLRIHTQEKPFRCSYCSRTFALKSTMVGHERTHSVTKKFPCGSCEHVFSTRSSLTAHARLHTRAFMCSICKKCFSGSSLLKNHIKCHSKPKTKISPEVESLVPQIILKEPLLISDAGNKISVAQVKSKKQQVYESGDTARPHKCTMCSAAFRKTSHLKQHHRRHTGEKPYKCPKCDRRFTSNSVLKSHLHTHEDARPHSCSVCNAKFTTHSSMKRHLITHSNKRPFMCPYCHKTFKTSVNCKKHMKIHKAELALQQVEKQKMQSKVVMIVDNPKEIPEYKKEDSVPETFALGDEITVPFQTQPVDFTDNFSGQYEPIAVQDKDKIHIPLSVANNIVHENVLHVSSVNLGTTQTLHADETGTITLPNYAGEHTLSAESIREIEETLNQQLFNIGMNLELGNPVSKQTETNSSLDSRNQTVLNIIYDSDKALEPVRNNENTHIFTPQFEPFGMGQISLQTNGDMDVGIESGKTTSMANILPSSVQEKQHLSIPATTGSVEITQKPLKHLMVVSPMQTRPELLRPVQACKKYSKIIAKADTTNATEVQILENDSKVEEVNVSISCTICNKLFEKELDLIYHVEEHIASATKVTQSAKINSIGSTALLHINSPTKTSEPDQNSIESNPLLQCHMCRKNGFTASELKEHLRTHQGEKEFECMECSLKFCTNGGLSRHLKMHAARQQYRCIICDKVLPNKVQMEVHLRGHNELFAGVAEADSSEKESLPVEIKFQEVSDDKNPSNTDAKISEQILLDSAEIMERLKLQSMVGKEEKKPEKNKCKFCPKTFRKPSDLTRHIRTHTGERPYQCQFCSKSFAVKCTLDCHMQVHSGKKTFSCHVCNSFFATKGSLKVHMRLHTGSKPFRCPVCDMRFRTSGHRKVHLLSHVREQKENKPRKTKQRKIAAIASVVADVENAIESVATETNRVEEPSAEETEFSNVDTVTIDASALTDQITFNPDGTVLNNNSVLSVSESNQLVANLHFLLANGLMTIQPDGFVTFPDSVLPGLANLQLETSQGDFLASADSENVIITQEPHSIDLEQSGFLNCTAVLQVEDNGTVFNSSITNPNMANPNVLNSSIPNSTGFRNSKGGPPRRECDICGKVFTKPCQVARHKRIHTGERPFKCERCDKAFAQKNTLIMHQKHHTGDRPHNCPFCTYSFSQKGNLQTHLKRVHKQESLEGKKLWKGEQQPPKFVQEGTVDNRILGLDDISLVELLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01391385;
90% Identity
iTF_00011366;
80% Identity
-