Basic Information

Insect: Belonocnema treatae
Gene Symbol: ham
Assembly: GCA_010883055.1
Location: NC:107627611-107690354[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 5.1e-06 0.0088 15.7 0.1 18 41 219 239 212 241 0.88

2 3 5.5e-06 0.0095 15.6 1.9 17 44 246 270 240 270 0.88

3 3 0.023 39 4.0 3.0 5 41 263 296 263 297 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	5.1e-06	0.0088	15.7	0.1	18	41	219	239	212	241	0.88
2	3	5.5e-06	0.0095	15.6	1.9	17	44	246	270	240	270	0.88
3	3	0.023	39	4.0	3.0	5	41	263	296	263	297	0.90

Sequence Information

Coding Sequence: ATGAGCGGATACTTCGGCAGAAGCACCCTGTCCCCTCTGCTCCACGACCCCAAGTACCCTCCAGCCATGCGGGAGAAAGACTCCAGTCCCAGGAAGATGCCAGGGCACATCAGCCCCAAGCAAGCCAGCATCTACCCCCTAAGTGTTCGAGTTCCGGACCCTGAAGAGTTGCCATACGACCTCAGCCATGGCCAAGGTCGAGGAAGCCCCACCCTGAACCAACAGCCCCACATGAGTCCCGCCGCCAGGCCTCCTCAGCCCCACAGTGACCAGGACTCTGAACCCCTGGATCTTCGCGTAGACCAcaaaaaggagagattaagagaCGAGAACCAAAACGATGCTGAGATGATGAACCAAAACAGTCTTGGGCTACCCTACCATACAGTTCTCTTCCCCCAACATCTCCCCCCACTCGTTTTGGAAGCGATGTACAGATCTCATCACCAGACAGTACCCGACTTGCCCAAAATCCAAGTTAGGGCTCTACCAACTATGGTGCCATTGCCTCCAAATCGGTTTTCAGCCGGTGCCTCCCAACCAGCAAAGGCCCCTAGTCCTGTACATCAACAGAACACGACAGCAACGTCTCAACAGCAACAACCGATTCCACCCTACTCAATTTCAACTGGGTTGAAACCCAAGGACAGATATTCGTGTAAATTCTGTGGAAAGGTATTCCCGAGATCTGCGAATTTAACGAGACATCTTCGAACCCACACTGGAGAACAGCCCTACAAGTGTAAATACTGTGAAAGATCCTTCAGCATATCTAGCAATCTTCAGCGTCATGTAAGGAACATTCATAACAAGGAAAAGCCTTTTAAGTGTCCTTTGTGTGAAAGATGTTTTGGACAACAGACGAATCTAGATCGTCATTTGAAGAAGCATGATGCTGATGGACCTACGATATTGGATGAGGTGAGGTCCAGGTACCATGGACAATTGCCAAGAACTGATGACTCGTATTTTGAGGAGATTCGAAGTTTCATGGGGAAGATTACATCCCAGAGGCAAGGAATTCCATATTTTCCGAGTCTTCTCGGAACTTCTGGAGAGGACTTTAGAAATGATAAACAGCAGTTGCAGATGGAAGAGAAAAGAGGAGATTCTTCCTACTTTAGTGATAGGGATAATCTGAGTTCGAGGTCGAGTAGTAGTAGCAGACCTGAAAGTGTTCATGAAGAGCAGAGGGAGAACTCACCACCTTTGTCTCCTGGGACTAATACTTGA
Protein Sequence: MSGYFGRSTLSPLLHDPKYPPAMREKDSSPRKMPGHISPKQASIYPLSVRVPDPEELPYDLSHGQGRGSPTLNQQPHMSPAARPPQPHSDQDSEPLDLRVDHKKERLRDENQNDAEMMNQNSLGLPYHTVLFPQHLPPLVLEAMYRSHHQTVPDLPKIQVRALPTMVPLPPNRFSAGASQPAKAPSPVHQQNTTATSQQQQPIPPYSISTGLKPKDRYSCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCERCFGQQTNLDRHLKKHDADGPTILDEVRSRYHGQLPRTDDSYFEEIRSFMGKITSQRQGIPYFPSLLGTSGEDFRNDKQQLQMEEKRGDSSYFSDRDNLSSRSSSSSRPESVHEEQRENSPPLSPGTNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00064752;
90% Identity: iTF_00011352;
80% Identity: iTF_00201087; iTF_00201344;