Btre012331.1
Basic Information
- Insect
- Belonocnema treatae
- Gene Symbol
- -
- Assembly
- GCA_010883055.1
- Location
- NC:83278931-83279641[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.2e-08 5.1e-05 22.5 0.0 4 38 17 52 14 56 0.88 2 2 3 2.9e+03 -2.3 0.0 17 23 148 154 146 155 0.72
Sequence Information
- Coding Sequence
- ATGAGGAATTACGTAAGAAAAACTAATGTAAAATCATGGAAGGAGTGTTCCATGATAGAGGCTTTAAAAGGcgttttagaaaagaaattaagtttcacaAAAGCCTCTGAAACGTACCCAATTCCGGCCTCAATTCTAAAAACCAGGTGGAAGAGAATGTTAGAAGCCGGCGGGCTTGATCAAGTAAAGTTTCTTCAGCTTGGTAAATATCGACCAACATTGAGTGAAGATCCAGAAAAAGAACTCGTGGAACATATTCGAATAATGGATAGCAAATTTTTTGGGCTCACGCGAAACAAGTTACGACgagttctttttaaatttgctgaGGAGTTAGGAATACCTCACAATTTTAGCAAAACCATCGGAATTGCTGGAAGAGATTGGTACCAAAAATTCATGAAAAGACATCCAGAGATTTCATTAAGAACACCTGAAAACACATCCTTTGCGAGAGCAGCCGGATTTAATAAGTTTGTAACAAACAAATTCTTCGATTTATTAGATGGACTAATGACTGAATTTGAATTTCCTCCCCATAATATCTGGAACGTGGACGAAACGGGTACTTCAGTTGTTCCAAAGAAACAACCGAAAGTTATAAGCCTAAAAGGAAAACACCAAGTGGGAATGATATCTTCTGCAGAACGTGGTATTACTGTCACCGCAGCAATTTGCTGCAATACTGCTGGTCAATTTTTACCATGTTAA
- Protein Sequence
- MRNYVRKTNVKSWKECSMIEALKGVLEKKLSFTKASETYPIPASILKTRWKRMLEAGGLDQVKFLQLGKYRPTLSEDPEKELVEHIRIMDSKFFGLTRNKLRRVLFKFAEELGIPHNFSKTIGIAGRDWYQKFMKRHPEISLRTPENTSFARAAGFNKFVTNKFFDLLDGLMTEFEFPPHNIWNVDETGTSVVPKKQPKVISLKGKHQVGMISSAERGITVTAAICCNTAGQFLPC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -