Btre001407.1
Basic Information
- Insect
- Belonocnema treatae
- Gene Symbol
- clz9
- Assembly
- GCA_010883055.1
- Location
- NC:74045798-74057233[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-08 1.3e-05 24.4 0.0 7 36 22 51 17 55 0.90 2 2 4.9 4.9e+03 -3.0 0.1 35 44 124 133 122 134 0.81
Sequence Information
- Coding Sequence
- ATGTCTAAAACCACAAAGAAGCATGTAACGAGAGTGATGACATACTCCAAAGCTGATGTAGAAAATGCCCtagcagaaataaaaaaaggcatGTCCATTCGAAATGCTagcaaaattttccaaattcccaGAACGACCCTTCTCTACAAACACACAGGAAAATCTCCTATTTCAGCCAAAAAGGGTCCAGCTCTCGTATTAACAGATAAAGAAGAATCTCAGCTCGTACAGTGGTTCATGAATGTCAGCGCAAAAGGATTTACTGTAACCAAACAGCAACTTTTAGACAGTGTACAGATATTAGTAAACAAAGTCGTCAAGAGGAAAACACCATTTTGTGATGGCCGACCTGGTCGTCACTGGTATGAAAAATACATTCGTCGTCACCCAAacctttcacaaaaaattgaagaaaactctGGAGAAAGAAGAGCACCTTTGTCCGAAGAGAGGATAAAAAAGTGGTTCCTTGAGGTAAAAAAGCTTCTATACGAAAAAGATCTCTTGGATATCCACCCGTCTCGAATATTCACCTGTGATGAAGCTGCCTTCTTTTTAAATCCGGAGGGTGACAAAACGATTATTCAAAGAGGGTCGAAAACAGTTCATAATTTAGCCAAAAGCAACGATAAAGAATGTTTAATAAGCATGTTCACAGCCAATGCTGCAGGAAATTTAGCACCTCCCATGGTTATGTTTCGATACCAAAGAACCCCTTACAGTATCACTACCAGTATTCCCGATGACTGGGCTCATGGAAATTCGGAAAATGGATGGATGAATGGCAGGACATTTTATGATTACATAACTGAAGACTTTTACCCTTggcttttagaaaataaatttgaatttccaatagtTCTGTTCCTTGACAAACACTCCTCGAATATGACGATGTCTTTGAGTAACTTTTGTGCAGAAAAGAATATAGAAGTCATTCCTCTTCACCCGAATGCCACACACATTATTCAGCCTTTGGACGTGGCATTTTTCCGCCCAATGAAATCGATTTGGAAGCACATCATTGATCAGTGGAATATAGATAATTTTGGAAGGAAATTTAGGAAAGAGAACTtttcttttgctttaaaacaGGCAGTGGATTTCGTTTATGACGTTGAAAATCTTAGGAATGGTTTCATGGATTGTGGACTGTGTCCCTTTTCTCCAGAGGCGATCAATTATTCTTTGATTAAAGATTCTGCAGCTTATAAAGAATTCAGACTCTTGGGTAGTAAATCTCCTGCAGATGAGTGTGCAGATAAAAGTGAAAGGTTTCTGCATTTGTTTGAAATGCATTTACCAGATGATAAATTGACTTTATTTAAAGAGAATGAACATAATCCACTATGGGCGGGAGATGAAAAGGACacgaatcttttttatttttggatgaacGTTAAGATGCTTGCTAATACTTCCATAGATAGCATAATGGATATgtga
- Protein Sequence
- MSKTTKKHVTRVMTYSKADVENALAEIKKGMSIRNASKIFQIPRTTLLYKHTGKSPISAKKGPALVLTDKEESQLVQWFMNVSAKGFTVTKQQLLDSVQILVNKVVKRKTPFCDGRPGRHWYEKYIRRHPNLSQKIEENSGERRAPLSEERIKKWFLEVKKLLYEKDLLDIHPSRIFTCDEAAFFLNPEGDKTIIQRGSKTVHNLAKSNDKECLISMFTANAAGNLAPPMVMFRYQRTPYSITTSIPDDWAHGNSENGWMNGRTFYDYITEDFYPWLLENKFEFPIVLFLDKHSSNMTMSLSNFCAEKNIEVIPLHPNATHIIQPLDVAFFRPMKSIWKHIIDQWNIDNFGRKFRKENFSFALKQAVDFVYDVENLRNGFMDCGLCPFSPEAINYSLIKDSAAYKEFRLLGSKSPADECADKSERFLHLFEMHLPDDKLTLFKENEHNPLWAGDEKDTNLFYFWMNVKMLANTSIDSIMDM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00089480;
- 90% Identity
- iTF_00064385;
- 80% Identity
- -