Basic Information

Insect: Belonocnema treatae
Gene Symbol: br
Assembly: GCA_010883055.1
Location: NC:99582971-99594743[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 4.3e-07 0.00043 19.6 0.0 2 38 196 232 195 238 0.87

2 4 3e-11 2.9e-08 32.9 0.0 5 39 249 282 246 287 0.85

3 4 0.0005 0.5 9.8 0.0 6 34 302 329 299 335 0.86

4 4 8.9e-14 8.8e-11 41.0 0.1 5 42 361 398 360 400 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	4.3e-07	0.00043	19.6	0.0	2	38	196	232	195	238	0.87
2	4	3e-11	2.9e-08	32.9	0.0	5	39	249	282	246	287	0.85
3	4	0.0005	0.5	9.8	0.0	6	34	302	329	299	335	0.86
4	4	8.9e-14	8.8e-11	41.0	0.1	5	42	361	398	360	400	0.95

Sequence Information

Coding Sequence: ATGTCTGAGGTCAACAACAGTGAACCTGTTAATGAAAGCTATTCTTTTAAATGGGGCGATTACCAGAATCATTTATCTGGAGTTGTTCGCCAGCTCCTCGAAGAGGATTGCATGGTGGATGTTACATTGTCTGCAGCTGGGGAACGCATTCACGCTCATCGCATTGTTCTTAGCGCTTGCAGCACTTTATTCAAAgAACTTCTCAGTCATGTGACGGACGATCACCCAACAATAATTTTAAGCGGCGTATCTGCTGAAGATGTCAGAGCAATTGTTGAATTCACATATCAAGGAGAAGCTCACGTTCCTGAAGAAAACATAAGAAATCTTTTGGAAGCAGCTCGTTTTCTAAAAATTACTGGTTTGATGGAGTATGATGTTAACGAGTCGAGCGTAAAATCTAGAGATTCAAGTGAAGAAAACGCTGATTCTTTCACAGAATTAAACGAAATGGAAGAAGAAGTATTTGACGTTTTAGAACAACCTTACGATGACACGAACGAACAGTCGGAACAGAGTGCAACAGAGGAAAGATCAGGAGTGAAAAAAAGAAAGCGACGATTTCCCATGAAAAGGGAATACAGCGAAGATATGCTAGCCGCCGCTATTAACAATTTACGTGAGGGACAGACTTTAATCGAagcttctaccaaaaataatatccCTCGTTCCACTTTGTATATGCGAGCGAAAGCATTGGGCATTCAGTTGAATGCTTCTAGAAATGAATATCCAGCCGAGTGTATGAGGGCAGCTATAAATTCTGTCATtgGTGGATCGAGTTTACAGCAAGCATCAGAAATGTTTGGTATTCCAAAAACTGTCCTCTGGCGACGAATGCAAAAAGAAGGCTACCATATTTTTCGTTCGGAAATGAAAAGAAGTTACGGCTCTGATAAAAGAGAAGCTGCTGTGGAAGCTTTGCAACGCGGAGAAAATCTCACGAAAGTTGCACAACAATATCAAATACCAAAGACAACTCTGTTTAGAGACAAGGCTCGTCTAGTCGACGAAGGCAAATTGCCTACATCTTTctggaaaaaaaggaaaactgaaaacgaatcgattaaaaaattccGGCTAGAAGAAGCTGTTGCTGCCTGTAAAAGTGGAAAAATGTCGCAAGCAGCGGCTTCCGTATTATATCATATTCCAAAAACTACGATATGGAGACGTTTGCAGCagcataattcaaaaattaaatcaaaaacagattCTGCGGATCCTCTTTCGAGTGTGCAAAATAATATCGAAGGCGATGCCCAATTTACATACTGCGagGTCGCTTCAGAAATCCCAGTGACTTACACAATTGAAGATAATGGCATCTCCGGAGAGCAGCAAGTTATAGTTTTCACGCCGGAAGAGGTCGAAGAACTCAATTTGGACGCTCGTACACAAATCATCATAAGTTCGgatTCAAATCAAGAATTTGTGACCAACTCCATGGCCGTCGAAGATGATACTAATTACAGTTCGAATAAAAGTTAA
Protein Sequence: MSEVNNSEPVNESYSFKWGDYQNHLSGVVRQLLEEDCMVDVTLSAAGERIHAHRIVLSACSTLFKELLSHVTDDHPTIILSGVSAEDVRAIVEFTYQGEAHVPEENIRNLLEAARFLKITGLMEYDVNESSVKSRDSSEENADSFTELNEMEEEVFDVLEQPYDDTNEQSEQSATEERSGVKKRKRRFPMKREYSEDMLAAAINNLREGQTLIEASTKNNIPRSTLYMRAKALGIQLNASRNEYPAECMRAAINSVIGGSSLQQASEMFGIPKTVLWRRMQKEGYHIFRSEMKRSYGSDKREAAVEALQRGENLTKVAQQYQIPKTTLFRDKARLVDEGKLPTSFWKKRKTENESIKKFRLEEAVAACKSGKMSQAAASVLYHIPKTTIWRRLQQHNSKIKSKTDSADPLSSVQNNIEGDAQFTYCEVASEIPVTYTIEDNGISGEQQVIVFTPEEVEELNLDARTQIIISSDSNQEFVTNSMAVEDDTNYSSNKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01392906;
90% Identity: iTF_00200916;
80% Identity: iTF_00200916;