Basic Information

Gene Symbol
onecut
Assembly
GCA_010883055.1
Location
NC:35810291-35927237[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.8e-38 4.7e-34 115.9 0.5 3 78 416 491 414 492 0.97

Sequence Information

Coding Sequence
ATGGAAGGTATAGGGGACATAGCCGATCATCAATCGCATAGCGAGCAATTACTGGACTCGGTCGATTCCCCAACGGCGATTTCTACGCAGGGCCGCAGTAGCAGTGGGGGTGGTTCGAATGGGAACTGCATCGGTGGTGGTGGGCGAAGAGGTGGTTGCATCAGTGTTGGTGATGGTGAACGTGGAAGAGGTGGGGGTATTAGGCACCACGAGGGTGGTGGTAGTGGAGGGGGTGAGGTTATGTCCGGCTCGTCGGCTTCGCAAAGCCCCGACATCGCGTGCGCGAGAATCCCGCTGGAATTGTTCGCGGCTGGTTCGCTCGGCTCCGTCAAGGAGGAGCGAGACCTCGCCGCCGCGGAGGATTTGTCTTCGTCCCAAGAACCGCCGGCGGGTCGGCCGAACGCGAGGGAGTCCCTCTCGGTCATCGTACCCCCGCAGGACGTCGACGTGGACTCGCGGGACGCTGACTCGGAACTCCTCAGTCCTGGCAAGCTCTCGCCGACATCCGGCATCAGTGTTTCCGTCGCGAGTATGATCGACGCGACGGACTTTAGGGCGATGCAGCCTGAACCAACTTATCAAACCCTGACCTCGGTGGCGGAGAGAATGTCGCCGCCAGGTTTTAGCCCTGGATCGTCGTACGCGACCCTGACGCCGCTTCAGCCCCTGCCACCAATCTCGACGATGAGTGACAAATTTGTCTATGGAGGACACGCCGGCAGTGGTGTTACCGGCAGTTTTGCCGTCATGCAAAACAACGGCCTTGGAAACATTTCCCTTGGAGGTATGGGAGGCTCGCCTTACGCATACGATAAACTTGCTTCGATGGGTATGTCACCTCCGCATAATTATCCTTCGCCTGGTGGAGGACTCCAACCAAGTCCCTTATCACCGCAGAGTGCTTACAGTCAAAGTGCGCTAAATTCACCTCACAAGTCTGCAAGTCCTCACTACGAGCCAGCCTTTTTGCCAAGGTTACAACAGAGTCCTGCTGCTCTGAGTCCGCCTTCGCCCCCGGTGTCAGCAGCCGCGAGTTTCGCGCCTTCACATCATTCCCCAAATGCGTTATCAGGACCAGCGTCGCCCCCTCCCATGCAGACGCAATTGCAACAACAGCAACAACAACAACAGCAGCAACAACAGCAGGCAATCCAGCAGCAGACGATATCCCATACACAACATGTGCAACACACGTCGGTCGTCATGAAGACGGTTTCTTCGGCTGGCAATGGAGCCGGTGAAGTCGAGGAGATCAACACTAAGGAACTAGCCCAACGGATAAGTGCCGAACTCAAGAGGTATAGCATACCCCAGGCGATATTCGCGCAGAGGGTCTTGTGTCGCAGCCAGGGTACCCTCAGTGACCTCCTGCGCAACCCTAAACCCTGGTCCAAGCTCAAGAGTGGCCGAGAGACCTTCCGGCGGATGTGGAAGTGGCTACAGGAGCCCGAGTTTCAGAGAATGTCAGCCTTGAGACTCGCAGCGCTGAGCAACTGCTCTGAGAGCGGCGGTGACGTGGACACCATGCTGGATATCCATCACCCTGGATCTGGAATCGAGTCTCACCACCAACAGTTTCACAACTCATATGCTGCCCAAATTCCACAGCGCGGAACTTGCAAGAGGAAAGACGAGATGGCGACCCAGGCAGAACACCAACAGCCCGCCCCCAAGAAACCCCGCCTGGTTTTCACAGACCTTCAGCGCCGTACTCTACAGGCTATTTTTAAGGAAACTAAGAGGCCGTCGAAGGAGATGCAGGTGACAATCGCTCGGCAGCTGGGCCTGGAGCCCACGACGGTTGGAAACTTCTTTATGAATGCGCGACGCCGTTCTATGGATAAATGGAAGGACGAGGACCCGAAAGCCATGGCCATGGATGAAGGACAATTATCACCATCGCTTGGAATTAGTCCACGACAAGCTTCTGACGTTTTGTGA
Protein Sequence
MEGIGDIADHQSHSEQLLDSVDSPTAISTQGRSSSGGGSNGNCIGGGGRRGGCISVGDGERGRGGGIRHHEGGGSGGGEVMSGSSASQSPDIACARIPLELFAAGSLGSVKEERDLAAAEDLSSSQEPPAGRPNARESLSVIVPPQDVDVDSRDADSELLSPGKLSPTSGISVSVASMIDATDFRAMQPEPTYQTLTSVAERMSPPGFSPGSSYATLTPLQPLPPISTMSDKFVYGGHAGSGVTGSFAVMQNNGLGNISLGGMGGSPYAYDKLASMGMSPPHNYPSPGGGLQPSPLSPQSAYSQSALNSPHKSASPHYEPAFLPRLQQSPAALSPPSPPVSAAASFAPSHHSPNALSGPASPPPMQTQLQQQQQQQQQQQQQAIQQQTISHTQHVQHTSVVMKTVSSAGNGAGEVEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLAALSNCSESGGDVDTMLDIHHPGSGIESHHQQFHNSYAAQIPQRGTCKRKDEMATQAEHQQPAPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDEDPKAMAMDEGQLSPSLGISPRQASDVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00625403;
90% Identity
iTF_00200658;
80% Identity
iTF_00200658;