Basic Information

Gene Symbol
ct
Assembly
GCA_010883055.1
Location
NC:93432469-93537902[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.1e-28 3.5e-24 84.2 0.0 2 72 507 578 506 583 0.95
2 3 1e-32 7e-29 99.3 0.0 2 77 909 985 908 987 0.96
3 3 5.6e-31 3.9e-27 93.7 0.0 3 75 1138 1211 1136 1215 0.95

Sequence Information

Coding Sequence
ATGCAGGCCTCCGCGGAAGCCAATTCCTTTGACCTACAGGCCATGCAGTCCATGGAGTGGCTCTTCAGAAAGGAACGCATCTACCTACTCGCGCAGTTCTGGCAACAGaaagcAAGTTTGGCTGAGAAGGAGGTCACGGCGTTGAAGGAGCAGCTTGCCGCGGCGAACGATGGGAATTCCAAGACTGAGGGACAACATTTGTCCCAGAATCCTCAGGGTGCCGAGCAGGCTCACGATGCCAGCAATCCGAGGAGGACGCCCAACAGCAACCTCGAGCAGGAACTTCAAGCCAAGGACAAAGAGatcAGTCAGCTGGTTGAAGAAGTATCCAGGCTGCAACTGAGTTTGCAGCGGCTCCAAGAAACGAGCGCTCAGGCGACGGCGCGCCTTGAAGAGGAACTCGAAGCGCGCCGACAGCACATCAGCAGACTAGAGAGTAAGCTAGAAAGACAGAGGGACTACGATGACCTGAAACGAGAAATAAGCGTATTAAGGTCCGTCGATCTCTCGCAAATACCGACTGGAGAACCTGGAAAAAGCCTCGAACACCTCCTTATGGAACGCTCAAAGGCTCTCCAACAAGCGGAGAACCTCAAACCACCCAGCACACCCGACACTCTAGGTGGACTATCGTCACCTCTGCAGCGTGCCACGACCGCCTCGCCCCACGGGGTGGTAAATGCACCACCATCATCCCTTGTATCCTCCCAGACAACACTCCCAACTCGCTCCACTCCGACACCATCTTCTGCCACATCAACGAGCTCGAGCCTCCTTTTCCCACCACCTCTCCAAAACGTGGAGACATTCGGTTCCTTCCTCGGCGAGGAGATTGTCGCTAATTGGAGGCGATCGCTGGAGAAAACGATCATGAGCCAACAGCAACCACAGCAAACGTCACAAGCTTCCCAACCACAGCAGACACAATCTACCATTCTAGGACTTCACCCACCTTCGACGCCAAGTAGTCTAAATCATCTTCCATCACCAACAGATCCCATCTCGTCGTCCAACACGCCAGCCAAGTCGAGCACACCTCTGGGTACCACTCTGGGTTCCCTAGATGCAACGGAAAAAGCCTCGACGCCGGTACCAGGTCACGAGACACCAGCACCACCTACGCCCTCATCAACGGCCTTGACATCTCCTCCAGCCACGTTACCACCTCCAACATCCACTGCGGATTCCATCGTCAATGGAGGAAGTATCGGAAGTCTGAGCAGTCTTGGAAGTCTCGTAAATCTAGTACCACCACCCAAGAGTCCTGCAGAGGAATCTTGTCACAACAACAACAATAGCCATCATCTAGCCAACAACAACAACATCGGTGCCCTCAGTGTTCTGGATAGTCTGAAGGGTCCCTTTCGATTTGACGACCGGACGCACCCTTTCAGATTTGGGGACGAGTTCGGTGCAGCAGGAATGGCTGGAAGGCTCGGAGAATCTCTTATTCCTAAAGGAGATCCCATGGAAGCTAGACTTCAGGAGATGCTGCGTTATAACATGGACAAGTACGCTTCCCAAAATCTGGATACGTTAAACATCGCGCGGAGGGTTCGCGAGCTGCTCTCGATACACAACATTGGTCAGAGACTTTTCGCCAAGTATGTCCTGGGTCTCAGTCAAGGGACTGTCAGTGAGCTGCTAAGTAAACCAAAACCTTGGGATAAACTGACGGAGAAAGGAAGGGACAGTTACCGAAAGATGCACGGATGGGCTTGCGACGACAACGCTGTTATGCTGCTCAAGTCTCTCATTCCCAAAAAAGGCAAGGAGCAGGGAATGCCAGCATTTGCTCGTGGTCCTCAGGATGGTCCACCGGACATGAGTGATGAAAGATTAGCTCATATTCTTTCGGAATCGGGTCACCTTCAAATGCGAGGTGATCTTGATGTCTCAAACGACGCCGACAGCAAGAGTCCAAGTCGTGTCGGTTGTCCCAGTCCTTTCAGCAAGGACCGAATGGACAGCCAAAACCGTAGACTGAAGAAGTACGAAAACGACGACATTCCCCAGGAAAAAGTTGTGAGGATCTATCAGGAGGAGTTGGCCAAACTCATGGGACGAAGAGTCGATGATCTTCGCGGACCCAGGGACTTCCTTCAAAGCGCGATGTTTCCGCACTTTTTCAGTGGCAACCCTGGAATGCCAGGCATGGAACGCACTCAGGATGATATTCGTCTCGCTCTTGACGCTTATCATCGTGAACTTCAGAAATTGAATGTAGCCACTGGCCAGACTCCTACCCTAGGCGGACTTCCACTTTCCGGCTTACCCAGCATCCTTCTCCAGCAACAAGCTCTTCAGCAGCATCATCTTGCGACAAACGGTGGTGCTGGTGTTCAGGATTTAAGCTTGGGCAAGCTGGATCCgcgaaataaaatgatgaacggAATCTCGGAAGAGGAGAAGGAAAAAATGGAAGAGGCTATGAGGCACGCTGGTAGCGCCTTCTCCCTAGTGAGACCTAAACAGGAACCGACGGGACCCCAGTCAACTCCTGGCGGTTCCAGCGCGAGTTCACCATTAGGCAACTCCATTCTTCCACCTGCAATGACACCCAGCGAAGAATTCGCTGGTGCTGCAGCAGCCAGCCCTCTTCAGAGGATGGCTTCAATCACCAACAGCTTGATCAGTCAACCGTCCACTCCAACTCACCACTCAGCCAATCAACGACCACTCAAAGCTGTTCTGCCACCCATCACCCAACAGCAATTCGACATGTACAACAACCTGAATACCGAAGACATTGTCAAGAGGgtgaaagagCAACTCTCGCAGTATTCAATTTCGCAGCGGCTCTTTGGCGAATCCGTGTTGGGCTTGTCTCAGGGTTCAGTCTCGGATCTTCTCGCAAGGCCGAAACCCTGGCACATGCTCACCCAGAAGGGACGGGAGCCCTTCATCAGGATGAAGATGTTCCTGGAAGATGACAACGCGGTTCACAAATTGGTCGCCAGTCAGTACAAAATCGCTCCGGAGAAGCTGATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCTTGCGGGACACCCATGAAGCCAATGCCACCGACTAAACTAGTTCAGGAGCAGCTTCAGAATGCAGCGAAGGCTCAAGCAGCAGCGCAGGCTGCAGCTCAAGCCGCTGCTCAGCATCAGCAGGAGAGTCAGATGCAGCTCGGACCACCTCCCCAGAATCCTCATCCTCAGATTCCTCAGCCACCACCGCCGATGATGATGACACCAACCGGTCCCCTTCATCCGCACGCTCAGCTCAACATGGAGCTTCAAAAGAAACAGCATCAGCAACAGCAGCAAATAAATCTCCACTCTCCCCACCATCAGATGGCTCCCTCACCACTGAGATCTCTCCATCCGCACATTTCCCCAAGTGTCTACGAAATGGCCGCTCTCACGCAAGACCTCGACACCCAAACGATCACCACGAAAATCAAGGAGGCGCTTCTGGCGAACAACATAGGTCAGAAGATCTTCGGAGAAGCCGTTCTGGGTCTCTCGCAAGGATCAGTCAGTGAACTCCTCAGTAAACCGAAGCCGTGGCACATGCTGAGCATCAAAGGAAGGGAGCCCTTCATCAGAATGCAGCTGTGGCTTTCCGACGCGCACAATGTCGACCGACTCCAGGCGCTCAAGAACGAGCGACGAGAGGCGAACAAGAGAAGACGCAGCAGTGGACCTGGACATGACAACAGCTCAGACACGTCGAGTAACGACACTGCGGAGTTCTACCACTCCGCATCTCCTGGGCCCGGTCCAGCTTCGGCGAAGAAGCAACGAGTTCTCTTCAGCGAGGAGCAAAAGGAGGCTTTGAGGCTCGCCTTTGCGTTGGATCCCTATCCCAATGTCTCCACCATTGAGTTCCTCGCTGGCGAGTTGAGTCTCTCTTCCCGGACGATAACGAACTGGTTCCACAATCATCGGATGAGGTTAAAACAGCAGGCGCCACATGGCCAGCCGGAGCCCCAGTCGCCAAGAGAACCCGGACAACCCTTCGACGCTGTCCACTTCAGGGTGCTGCTGAATCAGAAACTCTTGGAGATACAGAAGGAGCGACTCTGTCTGGGCAACGTGCCTCTGACCTATCCACCCTACTTCAACCCCAACTTGGCTGCACTCGTTGGAAACGCTCTGAAGGAACAGTGCTCCGGCCTCGACCTTTCGATGGGATCTTTGAAGCGGGAACCGATGCAAGAGTTCGAGGACGATGACGGCGATGACGGGATGAGCAATTTGGGAAGCGAGGACTCTGAAGGTTCTGCGGGGAGTATGAAGCGAGAGCAGACGGAAACCCCTGCCCCGACGACTGGCAGGTCGAGTAGGCGGAAACCTGCAGCTCCTCAGTGGGTGAATCCGGAGTGGCAGGAGCCAGCGAGGGCCGGGGACGAAGTGATCATCAACGGTGTTTGTGTGATGCAGACTGATGATTATGGCGTCAAGAGGGAGAGTGTGGAGACCGTCAGAGTTGAGCCGACTCCCGTTCAGGACCGGTTTGAGGAAGACGCTCAGAGTGATGTTTCTTCAGTTTCCGCCCACAATGCCCCCGACAGGGACAGTCCACTTCCGAGTCCAAAATCGGGGCACACGAGTCCCGTGACGTCTCCGAGGCCGCCTTCCGTTCAGCAGACGCAACAGACGGAAGGGAGTCCGAAAGAGGTCGTCAAACACGAACCCGAAGAGACGTGGGATTATTAA
Protein Sequence
MQASAEANSFDLQAMQSMEWLFRKERIYLLAQFWQQKASLAEKEVTALKEQLAAANDGNSKTEGQHLSQNPQGAEQAHDASNPRRTPNSNLEQELQAKDKEISQLVEEVSRLQLSLQRLQETSAQATARLEEELEARRQHISRLESKLERQRDYDDLKREISVLRSVDLSQIPTGEPGKSLEHLLMERSKALQQAENLKPPSTPDTLGGLSSPLQRATTASPHGVVNAPPSSLVSSQTTLPTRSTPTPSSATSTSSSLLFPPPLQNVETFGSFLGEEIVANWRRSLEKTIMSQQQPQQTSQASQPQQTQSTILGLHPPSTPSSLNHLPSPTDPISSSNTPAKSSTPLGTTLGSLDATEKASTPVPGHETPAPPTPSSTALTSPPATLPPPTSTADSIVNGGSIGSLSSLGSLVNLVPPPKSPAEESCHNNNNSHHLANNNNIGALSVLDSLKGPFRFDDRTHPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLNIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDDNAVMLLKSLIPKKGKEQGMPAFARGPQDGPPDMSDERLAHILSESGHLQMRGDLDVSNDADSKSPSRVGCPSPFSKDRMDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRVDDLRGPRDFLQSAMFPHFFSGNPGMPGMERTQDDIRLALDAYHRELQKLNVATGQTPTLGGLPLSGLPSILLQQQALQQHHLATNGGAGVQDLSLGKLDPRNKMMNGISEEEKEKMEEAMRHAGSAFSLVRPKQEPTGPQSTPGGSSASSPLGNSILPPAMTPSEEFAGAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQHQQESQMQLGPPPQNPHPQIPQPPPPMMMTPTGPLHPHAQLNMELQKKQHQQQQQINLHSPHHQMAPSPLRSLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHSASPGPGPASAKKQRVLFSEEQKEALRLAFALDPYPNVSTIEFLAGELSLSSRTITNWFHNHRMRLKQQAPHGQPEPQSPREPGQPFDAVHFRVLLNQKLLEIQKERLCLGNVPLTYPPYFNPNLAALVGNALKEQCSGLDLSMGSLKREPMQEFEDDDGDDGMSNLGSEDSEGSAGSMKREQTETPAPTTGRSSRRKPAAPQWVNPEWQEPARAGDEVIINGVCVMQTDDYGVKRESVETVRVEPTPVQDRFEEDAQSDVSSVSAHNAPDRDSPLPSPKSGHTSPVTSPRPPSVQQTQQTEGSPKEVVKHEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01394913;
90% Identity
iTF_01392655;
80% Identity
iTF_00200651;