Basic Information

Gene Symbol
Xbp1
Assembly
GCA_010883055.1
Location
NC:98822924-98826101[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.3e-14 5.3e-11 42.0 13.8 2 63 85 146 85 154 0.94
2 2 3.7 2.3e+03 -1.7 0.1 35 49 230 244 227 251 0.69

Sequence Information

Coding Sequence
ATGTGTCCATTGAAGAGTGTCATCATCACTTTGCCTAAGGGTCTTAAAAAAGACTCGGGCATAATTTCAACCAACGACCTCAGATCCGCTACGAAACTTAACTTTGCAACCTCCATTCTTACCGATAAGCTGAGGATTGATAACAGAAAAACAGTAAAACATATGGAAGACACAATGATAGATTCggggattttaaaaccagaaccAATTTGCATTAGAGGGAAGAAACGAAGGCTAGATCACCTAACATGGGAGGAAAAGCTTCAGAGAAAAAAGTTAAAAAACAGAGTAGCAGCTCAAACATCACGAGACAGAAAAAAGGCGAAACTAGACGAGCTGGAAGAGACCGTTCGAATGCTCGCTGAAAGAAATGATCTTCTGGTGCAAGAATGTACGATGCTTAGGTCGGAAAATGAATCACTCCACGACGAGACTGAAAGGTTAAAGACAGAGAGGCATTCGGAAACGACGAAGGAGCGGCTCTGCTCGATGTGTCAAGGTCGTGTCGATTTTACTGTCCCCTCATCGGGATCAGCAGAATCTCATCTAAACCCTCCGGCAGGGTGGGGCAGTTCAGTCGACACAACCTCTGATACTGACACCAAGTGCCGTCGTCCTTCTGAAGATTCTGACGCTCTACCTCCTCTCGAGGAACTATTCGGAGAACTCCAAGGGGATGACTACATCGATCGACTCGAGGAACTGGCCGAAAGTCTTCTGCGAGAAGTTACCGCAGAAGTGGAAGCAAATACTACTCGACCAAATGAGCAGGtatcagtcaagaaagaaaccgCCGGAGAATCTCCACTGGTGGGTCAAGCACCAAACGTCGTGGAAGTCAATGCAGGTTCAAGAAGCATAAGTGCTGTTGAGCAATCTGCATTGGTTCCCACATCTTGCATTAGCGAAGTTCCGCCTGATCTCGTTCCAGCCGAAAATTCACATCACCAGGACGTGAAGATAAAACGGGAACCAGCGAGCGACGTGGACACCGTGTATGGTACTTACGACGAGGCTACCAACTGTATTACGATAATCGTCAACGACGATATCAAGATCCAAGAGAGCGTACAAGAAATATCGTCGGAGGGCATTCAGAATCAAATCGACGAGCCAATGCCTTTAACTCCAGTGCATTATACTGATACTGATCACCTCTCACCTTACGCTTCCCATGACTCTATGTCACCCTCGAGTATTCACTCCGATGACACTGACTCGAGCGTGCCTATCAATAAACAAGATTCTAATTTCTCAGATACCGGATATGAATCTCATGGTTCTCCGTTTGATGAAACTTGCAGTGTAAATGAAACTTCTGTGCTAACAGATTTGTGGCACGAGAGTTTCTCAGAACTGTTTCCTAGCTTAGCCTGA
Protein Sequence
MCPLKSVIITLPKGLKKDSGIISTNDLRSATKLNFATSILTDKLRIDNRKTVKHMEDTMIDSGILKPEPICIRGKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKLDELEETVRMLAERNDLLVQECTMLRSENESLHDETERLKTERHSETTKERLCSMCQGRVDFTVPSSGSAESHLNPPAGWGSSVDTTSDTDTKCRRPSEDSDALPPLEELFGELQGDDYIDRLEELAESLLREVTAEVEANTTRPNEQVSVKKETAGESPLVGQAPNVVEVNAGSRSISAVEQSALVPTSCISEVPPDLVPAENSHHQDVKIKREPASDVDTVYGTYDEATNCITIIVNDDIKIQESVQEISSEGIQNQIDEPMPLTPVHYTDTDHLSPYASHDSMSPSSIHSDDTDSSVPINKQDSNFSDTGYESHGSPFDETCSVNETSVLTDLWHESFSELFPSLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-