Basic Information

Insect: Bellardia bayeri
Gene Symbol: -
Assembly: GCA_950370525.1
Location: OX493266.1:7273835-7283624[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2.6 2.1e+02 3.5 1.5 1 14 45 58 45 68 0.74

2 16 2.6 2.1e+02 3.5 2.6 1 23 312 335 312 335 0.81

3 16 0.018 1.5 10.3 1.6 1 23 345 367 345 367 0.95

4 16 0.0024 0.2 13.0 0.2 1 23 401 423 401 423 0.97

5 16 0.0021 0.17 13.2 3.5 3 23 431 451 429 451 0.97

6 16 3.7 3e+02 3.0 0.5 1 12 454 465 454 468 0.87

7 16 0.00024 0.019 16.2 2.3 2 23 631 652 630 652 0.96

8 16 0.14 12 7.5 0.6 1 23 685 707 685 707 0.97

9 16 0.0094 0.76 11.2 2.3 3 23 715 735 713 735 0.96

10 16 0.00029 0.023 16.0 2.2 2 20 751 769 751 771 0.94

11 16 0.0011 0.093 14.1 1.6 1 23 777 799 777 799 0.97

12 16 1.2 97 4.6 0.8 1 23 869 892 869 892 0.96

13 16 0.2 16 7.0 5.9 1 23 902 924 902 924 0.98

14 16 0.0002 0.017 16.4 0.2 1 23 958 980 958 980 0.98

15 16 0.022 1.8 10.0 4.0 1 23 986 1008 986 1008 0.98

16 16 0.24 20 6.7 1.4 1 17 1011 1027 1011 1028 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2.6	2.1e+02	3.5	1.5	1	14	45	58	45	68	0.74
2	16	2.6	2.1e+02	3.5	2.6	1	23	312	335	312	335	0.81
3	16	0.018	1.5	10.3	1.6	1	23	345	367	345	367	0.95
4	16	0.0024	0.2	13.0	0.2	1	23	401	423	401	423	0.97
5	16	0.0021	0.17	13.2	3.5	3	23	431	451	429	451	0.97
6	16	3.7	3e+02	3.0	0.5	1	12	454	465	454	468	0.87
7	16	0.00024	0.019	16.2	2.3	2	23	631	652	630	652	0.96
8	16	0.14	12	7.5	0.6	1	23	685	707	685	707	0.97
9	16	0.0094	0.76	11.2	2.3	3	23	715	735	713	735	0.96
10	16	0.00029	0.023	16.0	2.2	2	20	751	769	751	771	0.94
11	16	0.0011	0.093	14.1	1.6	1	23	777	799	777	799	0.97
12	16	1.2	97	4.6	0.8	1	23	869	892	869	892	0.96
13	16	0.2	16	7.0	5.9	1	23	902	924	902	924	0.98
14	16	0.0002	0.017	16.4	0.2	1	23	958	980	958	980	0.98
15	16	0.022	1.8	10.0	4.0	1	23	986	1008	986	1008	0.98
16	16	0.24	20	6.7	1.4	1	17	1011	1027	1011	1028	0.92

Sequence Information

Coding Sequence: ATGTCTGTTGACGTTATACAGCCTACTTCTATGCTACCCATGAAAAGAGCTCGGGAAAGCATATCTTTGTCAGAAGATAACGTCTCCAAATGCGGTGAACTATTTGTTACCAATTGTGCCGACAAATGGACATTTTATTGTACATACTGCCAAAAGGCTACCACTGATATTGGCGTTTTCATTTGCCATGTCAGACTGGAACATTTGAATGAACAGCAAGATTTGCTGCAGCCAAGTAGACCCATACCTGTCCTCGAAGGCAATGTCTGCACAATAATTGCTTCTTCATTACAAAATGCACAAAATCTGGATCGTTCAACAACTGGCACACATGTTGAAAGTTCTTTACCCAGCGAAGAACTGGCAGCAAACACAGAACAGGAAACAGTGGCCAGTCATATAGTTAAAGAAGAACCAACAATGGCTATTAGTCAAGAGAATATTGACTATGAACCAATTTGTACTACAGTTTCGAAAATTGTAGATATATCCTCATTAACCCTGCCGGCAAGTAATGAAACGGATGACGATATTTCCAATAAGaaCGCCACTGCAACATCAAATGCTTCCGATGAATTGGACGAAGAATTTGTGTCAGTAACAGCAAAAGACCATGAAATAGAAGTagaacaacaacatcaacagcagcagcagcaaaacaataagaaaatcaTACAAGTTGTTTATAGGAATGTTGATGAAGCTATAAATAAACGTCAAAGCAAAAGCAAGATTGATAGCCAACAGCAGGATGTAAATGATTCCGCAACGGATTCTGTAAATACAGCAAGTGAAGATGAAACAAATGATAATCAGCAAACACAAGTGAAAATGGAGCCGGATCTAAATGCAACAACGGCCAGTGGTAGTCGACGCAAAACACCACTTACAGAACATGGGCTTAAAGTTAAGACTAGCCGGGAACTGCTGCCGcataaatgtcaaatttgtcaACTGGGTTTCAAATCGCGTCAGGGTGTACATTTTCACATATCTAAAATTCATGATAAAAACCTGCACACCAGATTGCCACACAAATGTGCCGTCTGCAATAGAGGTTTCAAAACTATGCAGGGTTTAAAATATCACAAAGTTATTCATGAGAATAAGGTACAATACAAATGTCCCCTGTGTCCGGTGACACAATACAAActgtatattttcattaatcaTGTGCTAACGCACGAAAACAGCAGCTGCTTTCCTTGCCAGGTGTGTGGCAAAATATATGCCACAAATAAAGAACGTATGCTGCATTGGAAAAGTCATGCCAAAGATCGACCATTTGGTTGTAATATTTGCTATAGACGCTTTCGTAAACAACAATATCTGACACATCACTTGAAAGCTCACAATCAATATCAATGCCATTTCTGTCCCAACGAATTCAATTCACTAGAGACACAACGGCCGCCCTATGTGTGTATGAGATGTGAACAGTTGTCGGACATAAAGCAGAAAGTTAAACATCTTAGAACATTGGCAGAAAAGACACATATTTCCTTTGCCAACTCAACTCAAACTTTTAAGCAACAAATTAACCAAGAATTATATGGGACACCAATAATACAGCTAGAATCTCAACAACAGCAAGAACATGGAGAAACCATTAAAACCATAGAAGTAGTTTATATAAGCGatgataataaaaatgaaaatgaaaacaatgaTGGTAATGATACATGTTATACTCTAAGTGATGATGATGAAAAGGGAGAGGAGGAAGAGGAGGAGGATGTGTCTTCAAATGCCACAGAGTTTGAAAATAATGATGACAATAGAGCCAGTTGCAGtaaagaatttgaaaataatagtgaTAATGTAGCCAGTTGCAGTAATTATAAAACTGGACACAGTCGTGGcatgaataaaaatgtaaactatCCCTTGCAATGTCACAAGTGCAAGAAAGGTTTCAAAAGTCCAAATGGTTTAAAAGGACACCTAAAACTTCATGACGGCATCCTCTACATACCATGTCCCTTCTGCAAGgaaaaagtcaaaaataacaaattcgcTACACATGTTTTATTGCATGAAAGCTTGACATGTTTTCCTTGCCAGGTGTGCGGCAAAATACACAGCAGCAATGAAGAACGTTTAAAACACTGGGAAACTCATGCCAGGGACAAACCATATGGCTGTAATATTTGTTATCGGCgctataagaaacaaaaatatctcTTAAAACACGTAAAATTTCACAGTCCTAAGAAACTTAAATCCGCACAatataaaaagcaacaaaatgaaTGTGAACattgtaaaaaatgtttcaaggACCGCAAAGACCTAATTGATCATATAAGTGAATGCGAAAAATTACCATTTTATTGTGGCAAATGCAAGATAGGTTTCAAAAGCTTTAACGGTTTAAAGCGACACTTAAAATGGCATGAGAACGCCTCGGaaaatatggaaattaaagAAGTAGCTGAAAGCAATGAGTTTGTTTGTGAGAACAACACCAATGAAGACTCAAATAcgaatttttcttcaaataatgACTCCGATTTGGAATTTATTGAAGACACTGAACCCACTAGCAATTTAGACTATATCAAAGAAACTATAACTTCAACAAATTCAGCCGatataatacaatacaaatgtttgcatTGCCTTAATATCTATACATCTAAAGAGATACTCATCAATCACTTGGCCAAAATCCACGGCAAATACAATCGCTCGGTGTTTCCTTTTAAATGCAAACAATGCATTAAAAGTTTCCGATCGAAATCCGGCCTTGATTGTCATTATAAAACCCATGACAAAAACAATCTACATAAGTGTGCTGTCTGTCTGTATACCGATTACCGGATAGGTACTTACATTAAACATGTCATGACTCATGAAACGCCGACTTGCTTTCCCTGTCAGGGCTGCGGcaaaatatttgccaacaaCACTGAAAGAGTACAGCACTGGAAGACACATGCTAAAGAGAAACCCTATTCCTGTGATATTTGTTTAAGgcgttttctttataaacattttctcaAGGCTCACATGAAGTCGCATGGTCTGTATTATTGTCATTTCTGTCCGCAACAATTCAATTCGTCTCAGACTCTACAGCAGCCCTATGTTTGCGGGCACTGTGAAAAGTTGCCCCATATAAAAAGCACAGTAGATCATCAGAGATCTTTGGCTCAGCAAAAGCATGTTTTTGAATCGGATGAGGGGGAATAG
Protein Sequence: MSVDVIQPTSMLPMKRARESISLSEDNVSKCGELFVTNCADKWTFYCTYCQKATTDIGVFICHVRLEHLNEQQDLLQPSRPIPVLEGNVCTIIASSLQNAQNLDRSTTGTHVESSLPSEELAANTEQETVASHIVKEEPTMAISQENIDYEPICTTVSKIVDISSLTLPASNETDDDISNKNATATSNASDELDEEFVSVTAKDHEIEVEQQHQQQQQQNNKKIIQVVYRNVDEAINKRQSKSKIDSQQQDVNDSATDSVNTASEDETNDNQQTQVKMEPDLNATTASGSRRKTPLTEHGLKVKTSRELLPHKCQICQLGFKSRQGVHFHISKIHDKNLHTRLPHKCAVCNRGFKTMQGLKYHKVIHENKVQYKCPLCPVTQYKLYIFINHVLTHENSSCFPCQVCGKIYATNKERMLHWKSHAKDRPFGCNICYRRFRKQQYLTHHLKAHNQYQCHFCPNEFNSLETQRPPYVCMRCEQLSDIKQKVKHLRTLAEKTHISFANSTQTFKQQINQELYGTPIIQLESQQQQEHGETIKTIEVVYISDDNKNENENNDGNDTCYTLSDDDEKGEEEEEEDVSSNATEFENNDDNRASCSKEFENNSDNVASCSNYKTGHSRGMNKNVNYPLQCHKCKKGFKSPNGLKGHLKLHDGILYIPCPFCKEKVKNNKFATHVLLHESLTCFPCQVCGKIHSSNEERLKHWETHARDKPYGCNICYRRYKKQKYLLKHVKFHSPKKLKSAQYKKQQNECEHCKKCFKDRKDLIDHISECEKLPFYCGKCKIGFKSFNGLKRHLKWHENASENMEIKEVAESNEFVCENNTNEDSNTNFSSNNDSDLEFIEDTEPTSNLDYIKETITSTNSADIIQYKCLHCLNIYTSKEILINHLAKIHGKYNRSVFPFKCKQCIKSFRSKSGLDCHYKTHDKNNLHKCAVCLYTDYRIGTYIKHVMTHETPTCFPCQGCGKIFANNTERVQHWKTHAKEKPYSCDICLRRFLYKHFLKAHMKSHGLYYCHFCPQQFNSSQTLQQPYVCGHCEKLPHIKSTVDHQRSLAQQKHVFESDEGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -