Basic Information

Insect: Bellardia bayeri
Gene Symbol: -
Assembly: GCA_950370525.1
Location: OX493264.1:39728068-39730180[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 1.3 1e+02 4.5 2.8 1 23 319 342 319 342 0.91

2 10 0.011 0.86 11.0 4.4 1 23 352 375 352 376 0.97

3 10 0.07 5.6 8.4 0.5 2 20 382 400 381 402 0.93

4 10 0.00018 0.015 16.6 2.0 2 23 415 437 414 437 0.96

5 10 6.2e-05 0.0051 18.0 3.8 1 23 446 468 446 468 0.98

6 10 0.00072 0.058 14.7 3.4 1 23 474 496 474 496 0.97

7 10 0.00016 0.013 16.7 1.8 1 23 502 524 502 524 0.95

8 10 0.00035 0.029 15.7 2.4 1 23 530 552 530 552 0.99

9 10 1.8e-06 0.00015 22.9 0.5 1 23 558 580 558 580 0.98

10 10 2.1e-06 0.00017 22.6 2.4 1 23 586 609 586 609 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	1.3	1e+02	4.5	2.8	1	23	319	342	319	342	0.91
2	10	0.011	0.86	11.0	4.4	1	23	352	375	352	376	0.97
3	10	0.07	5.6	8.4	0.5	2	20	382	400	381	402	0.93
4	10	0.00018	0.015	16.6	2.0	2	23	415	437	414	437	0.96
5	10	6.2e-05	0.0051	18.0	3.8	1	23	446	468	446	468	0.98
6	10	0.00072	0.058	14.7	3.4	1	23	474	496	474	496	0.97
7	10	0.00016	0.013	16.7	1.8	1	23	502	524	502	524	0.95
8	10	0.00035	0.029	15.7	2.4	1	23	530	552	530	552	0.99
9	10	1.8e-06	0.00015	22.9	0.5	1	23	558	580	558	580	0.98
10	10	2.1e-06	0.00017	22.6	2.4	1	23	586	609	586	609	0.98

Sequence Information

Coding Sequence: atGGTGGGCTTATGTCGTTTATGTGCTTCCTTACGTAAAATGGATGCTTTAGTCTCCATTAAAGATGAATCCAGTGAAATATGCGAAAAGTTGCGTAAATGTTGTCAACTCAATATAAAAATGCAGGATGCTCTACCCAAATCTATATGTGAGGAATGTATAGAAAACTTAAGtaaatcatataaattttatacaaaagtaACCGAGGCACAAGAAACTTTGCAAGCATTATATCCTACCGCCAGCACGCATTGCGATAGTACGCAGAAAATAGAATCTGTCCAGCCATCTTTAGTGCAAACTTTGTCAGCGGTAAATGATAACTGTAGAAAGCGTAACTCATCTGTATTGGAGGTAGAGATAGTTAAATCttcaaatgaaaaacaaaaaaaggataATCCACAAATATCtgtaaaacaaatcaaattagaAAAATCTCTGCCAGTAAAACCCAACAGTTGCGTTAACGAGTCTCAAATTGATGACAATGTAACGGAAACGAAAAAATCACAGGAAAACTTTATACAAGAAGTATATAATATGCTAGATATGACCAAAGAAGAAGTAATGTTGGAAAATTCCTTTGAAATACTAGAAACTATAGAAGAAAATAATGTCGAAGATTTAACTGAGGAAGGTACCGAGAAATATTATGATTATCCAAAAGTTTGTGAACAGGAAGAACATCATGTTTTAGGGGGCATTACGACTGAAATCCATGTAGATGTTTTAAATGAGAATGAATTACAGACTGAAGAGATTAACGCAAAAACACAAGACATTATAATACCAGATAAAGCTTTAAAGATTCAATTTGAATATATGGATGATTATGAAGACGAAGAGGACGATGATGAAATAGTTTCAAATATAGATAACATGCAATCAGTAAATGGTGGTCAACAAGTAAAGCAACCTCCAGTGCATCAATTAAATTCTTGGAAGCATTATAAATATCTATGTTTTATTTGCGACAACGATTTTTGTAATTTCGTCCAGTTATACGATCACTTTACAAAAGAACACAAGAAAACACATCTCGACAAGTTACATTATAAATGTTATGATTGTCAGAAAGTCATATCGCGCTATAATTTCTTTCTTAATCACATACGTTCAAAACATCATCCTAATTTAAAGTTACAATGTGAAGTTTGCGATATAAGTTGTCAGACGTTTGAGGAGCTAGCGCATCATCGCAGTGTTAAATGTATAGAAGCTAGTAACAATGATCACATTGTACCCTGTAAtcaatgttttaaaagtttccACAACGCATACGGTTTACAAAACCATTACAAAACCCAACATACGAGCACAAAAGGTAAACTTAAATATCAGTGTACGGAATGTAAGAAAGTGTTTCAGTATAAAAGTTGCTTAAAAGTGCACGAACAAATTCACACAGaaaagaaaacttattcCTGCAGCTTTTGTGATAGCACATTCAGCCACAAAAAGAGCTTAGAGTTACATCTCTACGTGCATATAGATGAGAAAAGCTACAAATgcaatatatgtaataaaagTTTCAAAACATTCCTAACACTCGATCAACATCAAGTCCTACACAGTGAAGAAAAACCATTCAAATGCGAGTTTTGTGATAAAAATTTccgtaaaaaaattcaaaaaattgctCATGAACGCACGCACACCGGTGAAATGCCCTTCACTTGTGGACAGTGTGATAAACGTTTTCGTTTCCTCAGCGCTCTAAATGCTCATATTAAGATTCATACTGGTGCTAAACCTTATTCGTGTGAGTATTGTGATAAAAAGTTTGCTGATAGCTCAAATCgtaataaacatattaaacgTAAGCATGCCAATGCTGAAAGGGATGTAAATATACAAGATTAA
Protein Sequence: MVGLCRLCASLRKMDALVSIKDESSEICEKLRKCCQLNIKMQDALPKSICEECIENLSKSYKFYTKVTEAQETLQALYPTASTHCDSTQKIESVQPSLVQTLSAVNDNCRKRNSSVLEVEIVKSSNEKQKKDNPQISVKQIKLEKSLPVKPNSCVNESQIDDNVTETKKSQENFIQEVYNMLDMTKEEVMLENSFEILETIEENNVEDLTEEGTEKYYDYPKVCEQEEHHVLGGITTEIHVDVLNENELQTEEINAKTQDIIIPDKALKIQFEYMDDYEDEEDDDEIVSNIDNMQSVNGGQQVKQPPVHQLNSWKHYKYLCFICDNDFCNFVQLYDHFTKEHKKTHLDKLHYKCYDCQKVISRYNFFLNHIRSKHHPNLKLQCEVCDISCQTFEELAHHRSVKCIEASNNDHIVPCNQCFKSFHNAYGLQNHYKTQHTSTKGKLKYQCTECKKVFQYKSCLKVHEQIHTEKKTYSCSFCDSTFSHKKSLELHLYVHIDEKSYKCNICNKSFKTFLTLDQHQVLHSEEKPFKCEFCDKNFRKKIQKIAHERTHTGEMPFTCGQCDKRFRFLSALNAHIKIHTGAKPYSCEYCDKKFADSSNRNKHIKRKHANAERDVNIQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -