Basic Information

Insect: Bellardia bayeri
Gene Symbol: -
Assembly: GCA_950370525.1
Location: OX493264.1:30062040-30063997[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 1.1e-06 9.1e-05 23.5 0.6 2 23 287 309 286 309 0.96

2 8 0.002 0.16 13.3 8.0 2 23 317 339 316 339 0.96

3 8 8.9e-05 0.0072 17.6 4.4 1 23 357 380 357 380 0.97

4 8 3.3e-06 0.00027 22.1 1.9 3 23 423 443 422 443 0.99

5 8 0.0013 0.1 13.9 1.4 1 23 449 471 449 471 0.98

6 8 3.1e-07 2.6e-05 25.3 1.6 1 23 477 499 477 499 0.97

7 8 3e-05 0.0025 19.0 2.7 1 23 505 527 505 527 0.99

8 8 0.0003 0.024 15.9 1.8 1 21 533 553 533 557 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	1.1e-06	9.1e-05	23.5	0.6	2	23	287	309	286	309	0.96
2	8	0.002	0.16	13.3	8.0	2	23	317	339	316	339	0.96
3	8	8.9e-05	0.0072	17.6	4.4	1	23	357	380	357	380	0.97
4	8	3.3e-06	0.00027	22.1	1.9	3	23	423	443	422	443	0.99
5	8	0.0013	0.1	13.9	1.4	1	23	449	471	449	471	0.98
6	8	3.1e-07	2.6e-05	25.3	1.6	1	23	477	499	477	499	0.97
7	8	3e-05	0.0025	19.0	2.7	1	23	505	527	505	527	0.99
8	8	0.0003	0.024	15.9	1.8	1	21	533	553	533	557	0.90

Sequence Information

Coding Sequence: atgaattgcATGGAAAAATTGGAAAACCACCAATGTCGAACGTGTTATAATGCTACCAAAGGTTTAAGACTCCTGAAAAATCTAACCAAATGTATTAGCAGCCAAGAACAGAAATCGTATGCCGAACTCTTAAGAGAAGTCACCAGCATAAATATAATGGAAGAATCTTATAAAGAATTGCCACAATTTATATGCGACAGCTGTTCACGTAAACTGAAAGCGTCTCATGCATTCATCCAACAAACACATGAAGTTAATAAAAGACTTATGGCAATGTTAATTGGCCGGGACGAAAGGAATATTCAACTGGATTGTCTACAAGAAGCACAGGTGGACATACAGTCatgtttggaaataaaaatggAACATGATGAAGCCGTTGCAGAGGAAAAGTCTGAGGCAAAATGTCATGTCGTATTGAAGCTAGAAGAACCCGAGCAATTTCCTCAAATAAATCACATCAATGTAGACGAAATGAGAGAAAAGGATGATGGTGGTGGTTCAGTGGAATTAGtaactttaaaagaaacaagCGATCCAACAAAGTCCGTTTTAAATGatacagaaaaattaaatactgaAGACATATTAAATGTAGAAGCAGCAAAATATACTGATAATTCAATAACAGATACAAACCTGCAAACCGATTTGTTAATAGATAGTGAAGATGATGACGATGAAGATAACCGTGATGATGATGAAGATTATCAAGACAATGATTGGGAAGATTTGGATTggcaaaaagagaaaaaagctATTAGTAACAGTTCTAACAAGAAAGACgacaagaaaatttcaaaaaaatcaaagaaatctGACGAAAAAATGGAAAACCCGAACGACGATGTAGCCGTACCCTGCAGTCagtgcaataaaatatttagtaactCCAAAGCTCTAGCACGCCATCAACGTACTAGCCACATACCAGAAGATCAGAAATGTACATGCCCATTGTGTTTTCGTAAATTTTCACGTTCCTGCaatatgtatacacatatgcGTACGTTTCATGGTCCCGATACCGTACCGCTAATACGAAAGCCTTCAACACAAGAAAGAATCTTTCAGTGTGATAAATGTCCAAGGAATTACACGAAAAAGAAACACCTTAAtatacacataaaaaataaacacagtcAGGAAAATGCAGACAAggaaaaaattacagaaaaagcAGCTGAAGATGATAACAAAGAGGCGGCTAATGATGAAACGCCTGTTAAACCCAACAAACCGAAAAGATATGAAGTACGCTCTTTGTGTTCCATATGTGGCAGTTCGTTCTCTAGTAAAACTCATCTAATTGTACATATGCGGCGTCATACGGGAGAGCGCCCATTTAAATGTGATCTCTGTGATCGTGCTTATCCACGTATTTCCGAGTTAACCTGCCATCGACGCATACATACCGGCGAAAAACCTTTTGCCTGTAAAATATGTGGCAAAACGTTTCGAGTTTCCAGTAAAATGACCACACACATGCGCTCGCATACAGACATACGACCCTATAAATGTACGCAATGTGAACGCAGTTTTAAATACTCCAAAGATTTAAGTATACATTTTCGTATACACACGGGTGAACGGCCGTATTGTTGCAATGTTTGCGGCAGCACGTTTACGCAAAGTAATACACTAAAAGCCCATCGTGTCAAGTTGGGTCACATGGACAGTGTCGTGGACAATACCAATAATTTAGTATAG
Protein Sequence: MNCMEKLENHQCRTCYNATKGLRLLKNLTKCISSQEQKSYAELLREVTSINIMEESYKELPQFICDSCSRKLKASHAFIQQTHEVNKRLMAMLIGRDERNIQLDCLQEAQVDIQSCLEIKMEHDEAVAEEKSEAKCHVVLKLEEPEQFPQINHINVDEMREKDDGGGSVELVTLKETSDPTKSVLNDTEKLNTEDILNVEAAKYTDNSITDTNLQTDLLIDSEDDDDEDNRDDDEDYQDNDWEDLDWQKEKKAISNSSNKKDDKKISKKSKKSDEKMENPNDDVAVPCSQCNKIFSNSKALARHQRTSHIPEDQKCTCPLCFRKFSRSCNMYTHMRTFHGPDTVPLIRKPSTQERIFQCDKCPRNYTKKKHLNIHIKNKHSQENADKEKITEKAAEDDNKEAANDETPVKPNKPKRYEVRSLCSICGSSFSSKTHLIVHMRRHTGERPFKCDLCDRAYPRISELTCHRRIHTGEKPFACKICGKTFRVSSKMTTHMRSHTDIRPYKCTQCERSFKYSKDLSIHFRIHTGERPYCCNVCGSTFTQSNTLKAHRVKLGHMDSVVDNTNNLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00260021;
90% Identity: -
80% Identity: -