Basic Information

Insect: Bellardia bayeri
Gene Symbol: -
Assembly: GCA_950370525.1
Location: OX493264.1:30537273-30540041[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 4.4e-06 0.00036 21.6 0.7 2 23 275 297 274 297 0.96

2 8 8.8e-05 0.0072 17.6 1.9 2 23 305 327 304 327 0.97

3 8 2.2e-05 0.0018 19.5 1.6 1 23 348 370 348 371 0.95

4 8 0.00014 0.011 16.9 0.6 1 23 391 413 391 413 0.95

5 8 2.7e-05 0.0022 19.2 0.7 1 23 419 441 419 441 0.99

6 8 1.3e-07 1.1e-05 26.4 3.2 1 23 447 469 447 469 0.99

7 8 8.3e-07 6.8e-05 23.9 2.5 1 23 475 497 475 497 0.99

8 8 0.00042 0.034 15.4 1.3 1 22 503 524 503 527 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	4.4e-06	0.00036	21.6	0.7	2	23	275	297	274	297	0.96
2	8	8.8e-05	0.0072	17.6	1.9	2	23	305	327	304	327	0.97
3	8	2.2e-05	0.0018	19.5	1.6	1	23	348	370	348	371	0.95
4	8	0.00014	0.011	16.9	0.6	1	23	391	413	391	413	0.95
5	8	2.7e-05	0.0022	19.2	0.7	1	23	419	441	419	441	0.99
6	8	1.3e-07	1.1e-05	26.4	3.2	1	23	447	469	447	469	0.99
7	8	8.3e-07	6.8e-05	23.9	2.5	1	23	475	497	475	497	0.99
8	8	0.00042	0.034	15.4	1.3	1	22	503	524	503	527	0.91

Sequence Information

Coding Sequence: atgaataaaataaatagtaaatgtcGAACCTGCTTTAATGAAACCAGCAAAGGACTACAATCTCTTACAAAAAAGACTACAGATGAGAGCAACCAACAAAAATCCTATGCTGAACTCTTAAATGAGGTGGCCAACATTAatGTACTGCATGACAAATGTTCTAAATTGCCACAGGCCATTTGTGGCTGCTGTTCGCGGAAATTGAAAGCCGCTCATGCATTCGTGCAGCAGGCGCAGGaagtaaatgaaaaactttactcattgttgttattaaaacaGCCGGACGGTGTTAGTAAGCCCTTAGATTGTTTACAAGAGGTTCAAATCGATATAGAGGTATGTGCGGAGATTAAAATGGAGCATGATGATGCGTGTGATAATAGCGGGGGTGCAGATGCGATGGCTGAGCCAGAGTTCCTAAAGAAAGGTTTACAATTGAAGCAGGAAAATAACGAAGAAGACGCTTTAGCTGTAATTTATACTAAGAGTGAAGGAAATTCCGAAGAAGGCAATGACCTAAAAGATTCTTTGGATGTAACATTCCCCATCGTTTCCCTTACAACTGACATGTTTGATACTGAGGACAATATTCCAAATATTTTAGAACAAACTATGGATACTTCCGACGACAATAGCAATAATGAAGCATCTTGTGCTTCGGCAACAGATGACGATGAATGGCAAAACAAATCTaataattcgaataaaaaatcagtaaaaaagaaaacattatctgtaaagaaatcaaaaaaattatctaaGATCGAAGAAAGTAAACAAAAGAGAACTAGCGCAGATAATGAGGATGAGTGGTTACAGGTGAAATGTAATGATTGTGATAAAATATTCGACAATTCACGTTTATTAAGTCGACACCTGCGTCTGAATCATGTGCCAGACGAATTAAAAATACAATGCCTGTACTGTGAGGCAAAATTTAGTCGTCGCCACAATATGTATGCTCATATGCGTCGCATACATAAGACAGAAAATTTAGAACAGTTACAAATACAACCGAAAAAATCAAATGCCGAAAAGCAGTATGCCTGTCAACAATGTCCACGTTCATATACCAATAAATATAAGTTGATAGCTCATGTAAATAGTCATCATAATcctgacaacaaaaacaatgccCCTAAAGAGAAGGTACTGCAGCCGAAAAAGCGATTTTTGTGCACACTTTGTGGTTTAAAGTTCGATAGCGAAGGAAACTTAAATATACACTTTAGACGGCATACTGGTGAGAAACCTTATAAATGTGAATTTTGTGATCGAGCCTATCCTAGATTATACGATGTTCAAGTACATCGTCGTACGCATACGGGCGAAAAGCCCTACCAATGTACTCTGTGTGAAAAGACCTTTAGGCGATCGAACAAATTGAAGATACACATGCGAACACATACCAACGAACGTCCCTACAAGTGTACACAGTGTGAAAAGGCTTTTAAACAatcaaaagatttaaatatacacaaacgtACGCATACCGGCGAAAGGCCCTATAAGTGTGGTGTGTGCCAGAGTACATTTACACAGAGCAACTCGTTGCGTTTACATCAAATCAAACAACAACATTTGGAGAAAACAAATGCAGTGGAAGATTTGTCGGGAGTTATGACATTTATGTGTCAGCCAACATaa
Protein Sequence: MNKINSKCRTCFNETSKGLQSLTKKTTDESNQQKSYAELLNEVANINVLHDKCSKLPQAICGCCSRKLKAAHAFVQQAQEVNEKLYSLLLLKQPDGVSKPLDCLQEVQIDIEVCAEIKMEHDDACDNSGGADAMAEPEFLKKGLQLKQENNEEDALAVIYTKSEGNSEEGNDLKDSLDVTFPIVSLTTDMFDTEDNIPNILEQTMDTSDDNSNNEASCASATDDDEWQNKSNNSNKKSVKKKTLSVKKSKKLSKIEESKQKRTSADNEDEWLQVKCNDCDKIFDNSRLLSRHLRLNHVPDELKIQCLYCEAKFSRRHNMYAHMRRIHKTENLEQLQIQPKKSNAEKQYACQQCPRSYTNKYKLIAHVNSHHNPDNKNNAPKEKVLQPKKRFLCTLCGLKFDSEGNLNIHFRRHTGEKPYKCEFCDRAYPRLYDVQVHRRTHTGEKPYQCTLCEKTFRRSNKLKIHMRTHTNERPYKCTQCEKAFKQSKDLNIHKRTHTGERPYKCGVCQSTFTQSNSLRLHQIKQQHLEKTNAVEDLSGVMTFMCQPT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00260022;
90% Identity: iTF_00260022;
80% Identity: -