Bbay013460.1
Basic Information
- Insect
- Bellardia bayeri
- Gene Symbol
- -
- Assembly
- GCA_950370525.1
- Location
- OX493266.1:7286358-7291148[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.00077 0.063 14.6 1.1 2 23 107 129 106 129 0.96 2 22 0.002 0.16 13.3 5.2 1 23 139 161 139 161 0.99 3 22 0.032 2.6 9.5 0.3 1 23 194 216 194 216 0.97 4 22 0.15 12 7.4 4.4 3 23 224 244 222 244 0.98 5 22 7.6 6.2e+02 2.0 0.2 1 13 247 259 247 262 0.89 6 22 4.4e-06 0.00036 21.7 2.9 1 23 397 420 397 420 0.97 7 22 0.027 2.2 9.7 7.4 1 23 430 452 430 452 0.98 8 22 0.0078 0.63 11.4 0.0 1 23 458 480 458 480 0.97 9 22 0.21 17 6.9 0.1 1 21 486 506 486 508 0.92 10 22 0.002 0.16 13.3 2.6 1 23 588 610 588 610 0.98 11 22 0.0004 0.032 15.5 8.3 1 23 616 638 616 638 0.98 12 22 0.25 20 6.7 1.5 1 14 641 654 641 657 0.90 13 22 0.002 0.17 13.3 0.3 2 23 802 824 801 824 0.95 14 22 0.0054 0.44 11.9 1.4 2 23 831 852 830 852 0.97 15 22 0.00016 0.013 16.7 0.5 1 23 882 904 882 904 0.97 16 22 0.002 0.16 13.3 1.8 1 23 910 932 910 932 0.97 17 22 0.34 28 6.3 0.5 1 17 935 951 935 952 0.91 18 22 0.018 1.5 10.3 2.4 1 23 1042 1065 1042 1065 0.96 19 22 0.00013 0.011 17.0 9.7 1 23 1076 1098 1076 1098 0.98 20 22 1.6 1.3e+02 4.2 0.1 1 23 1104 1126 1104 1126 0.84 21 22 4.4 3.6e+02 2.8 3.6 1 13 1132 1144 1132 1154 0.76 22 22 0.0037 0.3 12.5 3.4 3 23 1162 1182 1161 1182 0.98
Sequence Information
- Coding Sequence
- ATGATTTCTCTTGACGCAACAACAAACCCTTTAGAGGAACAATTTGCAGCCGAACAACAAGAAACCATTAAAACCATACAAGTAGTTTATATAAACGatgaaattataaatgaatGCCAACAACCTGATAAGAGTGAAACTGCTGCTGCTACTTTAACAgctaatgatgatgataatgacgaTGACAATGACaaagacgatgatgatgatgaagctGATGGGCTATCAAATGTAAGCGGTACAAATGACAATACTGAAGCCGAGCAGAAAGCAAACAGAAAAGCCTCTTTAAGAAACGGCCGAATTGTATTTGCTAATAAATGTGAATATTGCAAAAGATATTTAAAATCTAAAGACGATTTAATTAAGCACATAATACGAACACatgataaaaattattacaaaaagttTCCCTATCAATGTCATAAGTGCACTAAAGGCTTTAAAAGTCCAAATGGTTTAAAATGTCACCTAAGAATTCACGGCAGTTTAGTGTTTCGGCAATGTCCCCTCTGTCCGTCAAATATACGCGATACTTATTTTGCTACCCATTTAACAAAGCATGAAAGTGACACGTGTTTTCCCTGTCAGGTTTGCGGCGAAATCTATACCAGCCATGCTTTACGTTTGCAACATTGGGAAACTCATGCTTTAGAGCAACCATTTGGCTGTAATCTTTGTTTTCGCCGTTATAAGAAACACCAATATCTATTAAAGCACTTGCAAAGTCATCAATTATACAAGTGTTATTTCTGTAAGCTGGAATTTGATACGCCGGCGGCAATAATACCTCCATATATTTGTCGTGACTGTGAAAAATTGCGTCTGGCTAAGAAAAAAGCTAAACAACTCAGGCATAAGTTAGCGGTAAGACAGCAACAAGAGgaCAACCAAGAAACGCAACAACATGAATCTTCCCAGCCAAAAGATCTGATAATCTTTCAGTCCAAGACTAACAACTCAGCGACAGCTGTAACAACCAGCGAAGTATTTCCGACTTCAGCAAACATTTCTAACGAAGaatcaaatactaatttttcTTACCAAACAAATAATGCTGCAAATAAGCATAATTTATCGAAAGATGTTGCCGATTTACAATCTATTGATGACAATCAACCCAGCAGCAGCAGTTTAAACTATACAAAACAAACTATAACAACTGGCAATAAAGGCCCTACATTACAATATAAATGTCAAGATTGCAAATATACCTTTACCACGAAAAAGGCCCTCCTCAAACACATGACCAAATGGCATcgcaaatacaaacaaaccaaCTTGCCCTTTAAATGTGAGCATTGCAATAGAAGTTTTCAAACTAAGACGGGCCTAAGTTGTCATCTAAAAACCCATGACAAAAATAGTCAATTTCAGTGTCCCATATGTCCGTTATCAGTATTTAGAGAAAGTCTTTACGTGGCTCATGTCATGTTGCATGAAAGCGAAACCTGTTTTCCTTGTCAGGTGTGTGCGAAAATTTTTGCCACAAATGAGGAACGTGTGGCACACTATCAGCCCCATATTACAGAGAGAGCCTTTGGCTGTGACaGTACCAAGAAAACCTCAACCACAATAGGACAAGAATCACAAAAACCGGTCAATAAAGAAATCATACAAGTAATTTATGTTAATGAACAAACTGAAGACAACCATGAAGAAGGCAGTGATACAATTACTTGTTATGCTTCAAGTGATAAGTTTGAGGAAAATCTAACAGATTTAGACAGTCATGTTTTGACGCATGAAAGCGATAGCTGTTTTCCTTGTCAGGTGTGCGGGAAAGTGTACAATAGTCATAAGGAACGTTTGCAACATCGGAAGACTCATGCTGAAGACAAACCTTTTGTTTGTCACTTTTGCCATCGTCAGTTTAAACAACAACAGTATTTGACAAATCATTTGAAAACTCACTGTCAATATCAGTGCAATTTCTGttcgaaaaaatttaattcgccGGAAACTCAAAGACCTCCCTATGCATGTACGAGCTGTGTAGAATTGCCGGAGATAAAGCAGAAAATAgaacaattgaataaaacacatGCTTTGGAAAGGGATCAGaACTGTGTTCTAGCCACACAACAAACTACTGCTGAATGTAATGAACCAAAAACTGCAATAGACAGACAAGCACATACACCACAGGAACAACTAAGTTCTGAGGTAGATGGGAAAAATGTCTCTCAAGTCGTTTATGTAAAGAATGAAGCCGTTGAAAAAACTGAATATGAAAGTAATAATGAgacaaatattgaaattctaCAAGTTAATGACTCTGATTCATGTTATTCGCCAAATGAAGATGACAATGATGACACGGATTTCGAAAGTACTGATGATAATGAAGCCAGTGGCAGTAAGAGCAAAAAAAAGAGCAAGCGCATAGACTTGACAAGTCTGCAATGTCCATATTGTCCAGCAGcatttaaatctaaattataTACTACGCGTCATATAATACGTAATCATAGCAGGAAACTGCCCATAAAATGTAGAAAATGTCAACGtggtttttttaatgaattcggCCTAAAAGTGCACTTAAAATCTCATGACAATATACATTGTCCGATCTGTAAATCAGTacttattaaaaacttctttatTAACCATGTACTGACGCATGAAAGCGATACATGCTTTCCTTGTCAGGTCTgtggtaaaatatttaacagtcaAAATGATCGCAAGAGACACTGGGAGTCTCATGCTAAAGAGAAACCATTTGCTTGTAATATTTGTTATCGACGCTATAGTAAACTTAATCGTCTAACACGGCATTTAAAAGTACACAATCAGCATCACTGTAACTTCTGTTcgatttcttttaattcatcTGAGACGTTACGAGCGCCACCCTATGTTTGTCCGAAATGTGAAAAATTGCCGgatataaagcaaaaaattaaagaccTTAAAACGTTCATGTATAACAGTGAGAACACTATTACAGCATCAAATACCCCCGCCACTTCTTCACTTAACATTAAGCCTGTCTCGGAAGATGTTCATGATGATGAAGTAgataaaacaacagaaaaaaactcaaatttagAATTTACTGATAAAACAACAAAAGCGCTAACCATACCCATCCACATAAACACAAATGCCACAGCACATAAATGTCAATATTGCGAACGAGACTTTTACTCCAAATTGGGTTTAGATATGCACATTAGACAAAGTCATATCAACAATAGCAGCGATGTGACTTCTAAACACAAATGCCAGCAATGCCATAAAGATTTCCGCTCCAGTTCATCCCTGTCTCATCACATGAAAACTCacgacaaaaaaaatcaatttcaatgTCCTGTGTGTCCGATCCGAAAATTCGGTGAAAGTTCTTTTATTGTTCATGTCATGCTGCACGAAAACGAGTCGTGTTTTCCCTGCCAGGTATGTGGCAAAATATTTAACTGCAACGAAGAACGTATGACACACTGGAAGTGTCATATCAAAGAGAGACCGCATGGCTGTAAGATTTGCTTTAGACGGTTCAGTCAGAAACATATTCTGCAACGTCATATGAAAGCTCACAGCCAACAAATGGATGTCTAG
- Protein Sequence
- MISLDATTNPLEEQFAAEQQETIKTIQVVYINDEIINECQQPDKSETAAATLTANDDDNDDDNDKDDDDDEADGLSNVSGTNDNTEAEQKANRKASLRNGRIVFANKCEYCKRYLKSKDDLIKHIIRTHDKNYYKKFPYQCHKCTKGFKSPNGLKCHLRIHGSLVFRQCPLCPSNIRDTYFATHLTKHESDTCFPCQVCGEIYTSHALRLQHWETHALEQPFGCNLCFRRYKKHQYLLKHLQSHQLYKCYFCKLEFDTPAAIIPPYICRDCEKLRLAKKKAKQLRHKLAVRQQQEDNQETQQHESSQPKDLIIFQSKTNNSATAVTTSEVFPTSANISNEESNTNFSYQTNNAANKHNLSKDVADLQSIDDNQPSSSSLNYTKQTITTGNKGPTLQYKCQDCKYTFTTKKALLKHMTKWHRKYKQTNLPFKCEHCNRSFQTKTGLSCHLKTHDKNSQFQCPICPLSVFRESLYVAHVMLHESETCFPCQVCAKIFATNEERVAHYQPHITERAFGCDSTKKTSTTIGQESQKPVNKEIIQVIYVNEQTEDNHEEGSDTITCYASSDKFEENLTDLDSHVLTHESDSCFPCQVCGKVYNSHKERLQHRKTHAEDKPFVCHFCHRQFKQQQYLTNHLKTHCQYQCNFCSKKFNSPETQRPPYACTSCVELPEIKQKIEQLNKTHALERDQNCVLATQQTTAECNEPKTAIDRQAHTPQEQLSSEVDGKNVSQVVYVKNEAVEKTEYESNNETNIEILQVNDSDSCYSPNEDDNDDTDFESTDDNEASGSKSKKKSKRIDLTSLQCPYCPAAFKSKLYTTRHIIRNHSRKLPIKCRKCQRGFFNEFGLKVHLKSHDNIHCPICKSVLIKNFFINHVLTHESDTCFPCQVCGKIFNSQNDRKRHWESHAKEKPFACNICYRRYSKLNRLTRHLKVHNQHHCNFCSISFNSSETLRAPPYVCPKCEKLPDIKQKIKDLKTFMYNSENTITASNTPATSSLNIKPVSEDVHDDEVDKTTEKNSNLEFTDKTTKALTIPIHINTNATAHKCQYCERDFYSKLGLDMHIRQSHINNSSDVTSKHKCQQCHKDFRSSSSLSHHMKTHDKKNQFQCPVCPIRKFGESSFIVHVMLHENESCFPCQVCGKIFNCNEERMTHWKCHIKERPHGCKICFRRFSQKHILQRHMKAHSQQMDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -