Basic Information

Insect: Bellardia bayeri
Gene Symbol: -
Assembly: GCA_950370525.1
Location: OX493264.1:39719867-39722704[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.17 14 7.2 0.7 1 23 318 341 318 341 0.95

2 11 0.0037 0.3 12.5 0.8 1 21 414 434 414 435 0.95

3 11 2.2e-05 0.0018 19.5 1.0 1 23 443 465 443 465 0.99

4 11 0.022 1.8 10.0 1.3 1 23 469 492 469 492 0.96

5 11 2.7e-05 0.0022 19.2 2.5 2 23 499 520 498 520 0.98

6 11 2.3e-07 1.9e-05 25.7 1.7 1 23 526 548 526 548 0.95

7 11 5.4e-05 0.0044 18.2 0.4 1 23 554 576 554 576 0.99

8 11 1.5e-06 0.00012 23.1 3.2 1 23 582 604 582 604 0.99

9 11 0.003 0.25 12.7 1.1 1 23 610 632 610 632 0.98

10 11 0.00058 0.047 15.0 4.3 1 23 638 660 638 660 0.98

11 11 0.017 1.3 10.4 5.3 6 23 669 687 666 687 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.17	14	7.2	0.7	1	23	318	341	318	341	0.95
2	11	0.0037	0.3	12.5	0.8	1	21	414	434	414	435	0.95
3	11	2.2e-05	0.0018	19.5	1.0	1	23	443	465	443	465	0.99
4	11	0.022	1.8	10.0	1.3	1	23	469	492	469	492	0.96
5	11	2.7e-05	0.0022	19.2	2.5	2	23	499	520	498	520	0.98
6	11	2.3e-07	1.9e-05	25.7	1.7	1	23	526	548	526	548	0.95
7	11	5.4e-05	0.0044	18.2	0.4	1	23	554	576	554	576	0.99
8	11	1.5e-06	0.00012	23.1	3.2	1	23	582	604	582	604	0.99
9	11	0.003	0.25	12.7	1.1	1	23	610	632	610	632	0.98
10	11	0.00058	0.047	15.0	4.3	1	23	638	660	638	660	0.98
11	11	0.017	1.3	10.4	5.3	6	23	669	687	666	687	0.95

Sequence Information

Coding Sequence: ATGAATACtgaaaaaatttgtagatgctGTCTGGCTTTGGATGTGCCATTATTGTCTATATATGATGGTGGATCAGCTGGAATGGGTTGTGTGGCAGATATGCTAAAGCAAATAGCCATATTAATGCCTCAGAAGAACGACAACATGCCTAATAAAGCTTGCTTGCAATGTATAAGTGAAATCAATCGTTGTTTTGTGTTCAAAATGAAATGCGAAAATTCTAATAGAACTCTTAGGCAATTATTGCCCAATGCAGTACCTGAGCCTGTAGAGTACGTACCAAAAAAGGCTCTTGTGGCCTCTTCCTCAGTACAGACAGACGATAAGATACTTATTTCGTCTATggtacaaacaaatttagaaattatGCCATTAGTAAGCCACAAGGAAATCCAAACTGAATATGAGATTATTCCCACTGATGTGACAAAAACTGAAAACACTTTGCCAGAAAACATTATCATATATGAAGAATTTGAAGAACAGAACGTTATGTCTAAAAAGCCCGCACAATCCTCTCCTTCGAACAAACAGGCATCAAAGAAATTGTGTTTGGAAGCAagaaacacaaataatatacttacTGTTCAAGAATCCAAAGTTGATGCTCAACAATCAAATGCCTATATATTATTTGAGGATTCCAATGTAGATTCGAATTGTTCGGTAGTAGAAGAAATATTTATACCAACctcagaacaacaacaaaaagacgCCGAATGTAATCGCTTTGAATACTATGAAAATAACGTAGAAGACACGCAAGATGgacaacaaaatcaaatataccAAGATACCGAATATATCTACAAtgaaaatttgaaaactaaTAATGAGTATGAAATTGATAGTTCAGAAACAATTATGAAGTCTCCCGAGGAATTGTATACATCTGTAAAACATCAAAAATCTTCCATATGCACAAGATCATCCAATAAACCAAAGGGCCAATACAAATGTTCGCAATGCATTATGACATTTATCAGTATAAAGGTTCTTAAAAGGCATTTAGCCAATAGGCACGATATTAAAGATGCTGATATTATAATTGACTATTTACCTGCTGTGGAACCAGATGAAACAATATTGAGTATTGAAGAGCCTTCGTCTTCTGATAATATAGCAAAACAAATTAACAGCAATGTGGAATTAACTGCAGAAAATGTTGCAAAACCGCAGTTGCTGTCAAGAGAAAGAGTATCGTCATCGGTAAATGAGGAATTGTTgacaaatgtaaaatatttttgtgatgaCTGTCAAGCTGGATTTGCTCAACGTAAATCATTGACATACCATATCAAGCATCAAATCTGTATGACTGCTAATTATAAGTGTAATCAATGTGAACGTAACTTTGTTTCCGAGGAAAATTTGGAAACTCATAAACTCACCCATGAAAATCCACATAAATGCCTAGAATGTGCTACAGTTTGCAAAACTATTGAGGAACTAAGCCAACATATGATTTCAATTCACAATAGAAGTGCTAGTAATCAGTGTCATGTCTGTAAAAAAGTTTTTACCATGAAAAATTCATTAATGGATCACTTGCGCATACACAGCGGGGAAAAACCATTCCTCTGTACAATATGTGGTAAGAGTTTTAATCAAAATTCAAATCTACGCCAACATCTAACACGACACACTaatgagaaaaaattcaaatgtgATATATGCCCCAATGCGTATGTAACCAAAGCGGAACTATTTTCACATAAACGTACGCACACTGGTGATCATCCCTTTAAATGTGATATTTGCGATGCTCGCTTTAGCTCAGCCTGCTCTCTAAGAAAGCACATGCGCAAGCACACAGGTGAAAGGCCCTATGCCTGTGAATTTTGCTCCATGCACTTTGCTACTTTGGGTGTATTGAAAAATCATCGTCGTATTCATACCGGTGAGAAGCCTTTTAAATGCCGTTATTGTCCAAAGTCATTTACACAATCAGGTGATTGTCGATTGCACGAAAGAACCCACATAAAAAAGGATTTCCAATGTTTTTGCGAAACGAAATTCTCTAAAAAGTCTAACTTTAGACATCACATTAAAACTCAGCATCCAGACtttaatgaaaaagaaattcaGGCTCTTCTAGATAAATCAATTGTGAACAATGATAATACAGAATATCACATAACACTGATGGATGATACAaatgataaatttgttaatagtcCCAGTGCTGGGCATAATGATGttgttgatgaatttgtaaaTGATGGTAAGAATGCTACATTGCCAGCATCCAGCAGAACCTCAAACAGTAATGAAGAACTTTTGGAAATAGTTATGGAAGATGTAGGTTAA
Protein Sequence: MNTEKICRCCLALDVPLLSIYDGGSAGMGCVADMLKQIAILMPQKNDNMPNKACLQCISEINRCFVFKMKCENSNRTLRQLLPNAVPEPVEYVPKKALVASSSVQTDDKILISSMVQTNLEIMPLVSHKEIQTEYEIIPTDVTKTENTLPENIIIYEEFEEQNVMSKKPAQSSPSNKQASKKLCLEARNTNNILTVQESKVDAQQSNAYILFEDSNVDSNCSVVEEIFIPTSEQQQKDAECNRFEYYENNVEDTQDGQQNQIYQDTEYIYNENLKTNNEYEIDSSETIMKSPEELYTSVKHQKSSICTRSSNKPKGQYKCSQCIMTFISIKVLKRHLANRHDIKDADIIIDYLPAVEPDETILSIEEPSSSDNIAKQINSNVELTAENVAKPQLLSRERVSSSVNEELLTNVKYFCDDCQAGFAQRKSLTYHIKHQICMTANYKCNQCERNFVSEENLETHKLTHENPHKCLECATVCKTIEELSQHMISIHNRSASNQCHVCKKVFTMKNSLMDHLRIHSGEKPFLCTICGKSFNQNSNLRQHLTRHTNEKKFKCDICPNAYVTKAELFSHKRTHTGDHPFKCDICDARFSSACSLRKHMRKHTGERPYACEFCSMHFATLGVLKNHRRIHTGEKPFKCRYCPKSFTQSGDCRLHERTHIKKDFQCFCETKFSKKSNFRHHIKTQHPDFNEKEIQALLDKSIVNNDNTEYHITLMDDTNDKFVNSPSAGHNDVVDEFVNDGKNATLPASSRTSNSNEELLEIVMEDVG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00259976;
90% Identity: -
80% Identity: -