Basic Information

Gene Symbol
ZBTB41
Assembly
GCA_950370525.1
Location
OX493267.1:89053594-89056489[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.038 3.1 9.3 3.4 1 23 182 204 182 204 0.98
2 11 1.1e-05 0.0009 20.4 1.2 1 23 210 232 210 232 0.99
3 11 3.8e-05 0.0031 18.7 0.7 1 23 238 261 238 261 0.95
4 11 0.015 1.2 10.5 4.8 1 21 267 287 267 289 0.95
5 11 6.3e-05 0.0051 18.0 2.1 1 23 295 317 295 317 0.99
6 11 6.6e-05 0.0054 18.0 3.7 1 23 323 345 323 345 0.98
7 11 0.00062 0.05 14.9 4.5 1 23 353 376 353 376 0.98
8 11 0.00066 0.053 14.8 0.5 2 23 383 404 382 404 0.97
9 11 0.00098 0.08 14.3 2.5 1 23 410 432 410 432 0.97
10 11 4.5e-06 0.00036 21.6 0.6 1 23 438 461 438 461 0.97
11 11 7.6e-07 6.1e-05 24.1 3.0 1 23 475 497 475 497 0.98

Sequence Information

Coding Sequence
atgaCATCCATCGCCAATGATCAGTATTTTCAAACGTATTTGGAAAAATTAGATAACGATGAGGTAAATGAGAAAGACAATGAAACATTTCAGTCAGAGGTGGCTGAGAATGATGGTGTTGATGCTGAGAATGATGAAAAGCATAATGGTACTATCATAATGGATACTGATGGTaactattattttgaaaaaatggtaAAGTTGGaacctttaaaaaaagtaccacagAATCCGGGAAAAAAAGGTTCTGCAACTATCACTGCACAATCAAAGAATCGTAAAATTGCAGCACATGATACAGCCGTTTCTACTAAGAAAACGAAATTATCACCCAGTACTAGtaaagcaattaaaaataaagaaattgtggTAAAACCAGTAGACGAAACAATTACCTCTGATAACGATTATCAAGAAGAGGTATACAATTTCGATGAGAACGAACAAGATGCAGATGATCCCCGCGAGGAAGCAGACGAAGATTATGTGTCCAaaggtttattaaaaaaattaaaaaaaactacaggaAATGAGGCAGCATCGTTTACCTGTATGATGTGTCTGTATCAGACTAACAAAAAGTTCTTACTGTCCAGGCACATGAAAACACACTCCGAAGATCGTCCCTATAAATGTGCCGTGTGCGAAAGAGGCTTCAAAACAAGCACTTCACTTATGAATCATCGAAATACACATTTGGGCCTTAAACCTCATGCATGCAAAGATTGCGAAATGGCCTTCACTACCTCGGGAGAATTGGTGCGACATGTACGATATCGACATACACACATAAAACCACACAAGTGTACAGAATGTGATTATAGCAGCGTAGAAATGAGTAAATTACGGCGACATATGCGCTGTCATACCGGAGAACGGCCCTATCAATGTCCCCATTGTACATATGCTTCACCCGATACGTTCAAACTCAAGCGCCATATGCGCATACACACTGGTGAAAAACCATATGAATGTGATATTTGTCATGCTCGCTTTACGCAATCAAATTCTCTGAAACATCATCGTCTTATACATTCTGTCAATGAAAAACCTGTTTTTCAATGTCATCTCTGTCCTACAACTTGTGGGCGTAAAACTGATTTACGTCTTCATATAAAGAAGTTGCACAGTTCTGATCAACCAATACCATGTAAACGGTGTGGCAAAGAACTGCCCGATCGTTATTCGTATAAAATGCATCTGAAGACACACGAAGGTGAAAAATGTCACCGTTGTGAATACTGTCCGTATGCCTCGATTTCGCAGCGACACCTTGAGTCACACATGTTTATACATTTGGATACCAAACCATATGTATGCGAGATTTGTCAGACCAGTTTCCGACAGAAACCACTGCTTACTCGTCACGTGAAAATTTATCATTCGGATAACTACGAACCGCCACAAGCACGCAAAAAGGATCACAAGTGCCCAcattgcaataaaatgtttgcattcAATGGGAATCTTATGCGACATATGGAAATTCATGATCCTTCATCTCGACTGTTTGAAAAGAAAGAAGAGTTGAAAATTGGACGCATGAAGCGGGTTCTACCGGATGGCACCGTTCTGGCAGTGCCAAATAATACACCGAAACTGTTCAACATCGACGAAGAATACATATATGAAGAAACCGGGGAACAACAACAAGTCGAGAATGAAGTATTACAAGAAGAGGAGTATGAGGAAGAAGAAGTAGAGTACACTGAAGACAATATTCAATACGTGTATGATGAATTGGAAGGTGATGAGTATGAAGAACAGGAAGATTACAAAGAGCAACAGGAAGAAGACAAAGATAGAAAAAACTTAATCGatttgaaaatggaaaaaatagaaACGATTGTTGATCCACAACCAGCACCTAAACAAATCACAAACATTAAGGCCGAAGAGAACGATGGTTGCGAAACCTTATCTTTGGAGGTACACGATGATCAAGGTTTTATGGTTATAGAGGTTTTGCCAGACGACGATGATGAACAACAAGCAGAGCAAGTTGTACAACAGGTGCAACCCCAAATGCCACAAGTTAGACCTACAATAACCtataaaaaggctaaaaaagacacagttataaAATCGCAAAAAAATGGACAACCTATAATTTCAGATTATTTCGGATTTGAAATCAATGAAGATGATGAGGACTTTGAAACCAAAGGAGCTATTAAAATATTAGAGATGATTGAACAAgactaa
Protein Sequence
MTSIANDQYFQTYLEKLDNDEVNEKDNETFQSEVAENDGVDAENDEKHNGTIIMDTDGNYYFEKMVKLEPLKKVPQNPGKKGSATITAQSKNRKIAAHDTAVSTKKTKLSPSTSKAIKNKEIVVKPVDETITSDNDYQEEVYNFDENEQDADDPREEADEDYVSKGLLKKLKKTTGNEAASFTCMMCLYQTNKKFLLSRHMKTHSEDRPYKCAVCERGFKTSTSLMNHRNTHLGLKPHACKDCEMAFTTSGELVRHVRYRHTHIKPHKCTECDYSSVEMSKLRRHMRCHTGERPYQCPHCTYASPDTFKLKRHMRIHTGEKPYECDICHARFTQSNSLKHHRLIHSVNEKPVFQCHLCPTTCGRKTDLRLHIKKLHSSDQPIPCKRCGKELPDRYSYKMHLKTHEGEKCHRCEYCPYASISQRHLESHMFIHLDTKPYVCEICQTSFRQKPLLTRHVKIYHSDNYEPPQARKKDHKCPHCNKMFAFNGNLMRHMEIHDPSSRLFEKKEELKIGRMKRVLPDGTVLAVPNNTPKLFNIDEEYIYEETGEQQQVENEVLQEEEYEEEEVEYTEDNIQYVYDELEGDEYEEQEDYKEQQEEDKDRKNLIDLKMEKIETIVDPQPAPKQITNIKAEENDGCETLSLEVHDDQGFMVIEVLPDDDDEQQAEQVVQQVQPQMPQVRPTITYKKAKKDTVIKSQKNGQPIISDYFGFEINEDDEDFETKGAIKILEMIEQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00259960;
90% Identity
-
80% Identity
-