Basic Information

Insect: Bellardia bayeri
Gene Symbol: ham
Assembly: GCA_950370525.1
Location: OX493265.1:96723889-96774856[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.046 3.7 9.0 0.0 2 21 308 327 307 330 0.87

2 9 0.016 1.3 10.4 3.0 1 23 337 360 337 360 0.93

3 9 2e-07 1.6e-05 25.9 3.3 1 23 366 388 366 389 0.96

4 9 2.3e-06 0.00019 22.5 1.7 1 23 395 417 395 417 0.95

5 9 2.8e-05 0.0022 19.1 4.9 1 23 423 445 423 445 0.99

6 9 0.00039 0.032 15.5 1.1 2 21 453 472 452 473 0.95

7 9 9.1e-09 7.4e-07 30.1 1.3 1 23 910 932 910 932 0.99

8 9 4.8e-07 3.9e-05 24.7 0.9 1 23 938 961 938 961 0.97

9 9 8.3e-05 0.0068 17.6 6.6 1 23 967 989 967 989 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.046	3.7	9.0	0.0	2	21	308	327	307	330	0.87
2	9	0.016	1.3	10.4	3.0	1	23	337	360	337	360	0.93
3	9	2e-07	1.6e-05	25.9	3.3	1	23	366	388	366	389	0.96
4	9	2.3e-06	0.00019	22.5	1.7	1	23	395	417	395	417	0.95
5	9	2.8e-05	0.0022	19.1	4.9	1	23	423	445	423	445	0.99
6	9	0.00039	0.032	15.5	1.1	2	21	453	472	452	473	0.95
7	9	9.1e-09	7.4e-07	30.1	1.3	1	23	910	932	910	932	0.99
8	9	4.8e-07	3.9e-05	24.7	0.9	1	23	938	961	938	961	0.97
9	9	8.3e-05	0.0068	17.6	6.6	1	23	967	989	967	989	0.98

Sequence Information

Coding Sequence: ATGCATCAGGGTCTGAAAGGTTTAAGACGTACCACGGCGGCtcgaaaacttcttagtctagcacaggaagaaaataGCAGCACAGGTGACGACTACGAATTCGGTGGTGCATTCAAACAATATCCCAACAATCTGGCCTCCCCCGACTCCACCAACACCCTAAGATTAGCCACCAACACCAACGATCTTAACAACTATCAGCATAATACACACCAACACCTCCACCACCAGCGTCACAACGGTTATAGTCAAAGTAATTCACCTAGTCGTACGTTGGGCATAGATTCCACAACATTAGTTAATACGCTGCCCCACTCACCAGCCCACATGGAACATTTATTTAGTAGTAAATTGCAGGCGGAAAGGCTGCTGCTTGAGTTAACACGTTTACAAGAACCTATCTGTGATTTGAAATCAAGTGAAAATGGCGTTGTAGCCAAACAGCATTTGAGAAGGGGGACACGCTTTGGACCGTTTGCCATAACAGAGTCAACGGAAAAATCAAATGCCTGGGATATCTTACCCATGTCCCATATACGTAGCCTATTAGAACCCTCACCCGAAGTTAAgttgttattaaagaaaattcgtACTTCCTCCAATTTGGATTGTGAAAAAGAggctaattttaataatttttatgtggCGGGATGTcTTTGGTATGAATCTAATCGTGATATTGAGGCTGGTGAAGAGATTATTATTGACGGCCGGCCCAAAACCCTCTATGAGCACAATGAATTATTGGCGAATGGAGAAATGCACAATGGTTCCTCAATACATAGCAGTGATGATAGAAGTGAACGTGATAATGCCTCATTTTATGGTTCAAATATAAACCGTGAAGACGATTATAAAAAAGACAAATCCTCGGATCAAATTAAAAGTGAACTAAGTGATGATGAAAACGGTTTTGATATACGCTGTGAAGTTTGCGATAAAGTCTTTATAGAATTAGAAGGTTTGGACGATCATTTGGTTGGTGCCCATCACTTTCGTAAAGACGAATTTGTCTGTGAATTGTGCTCTCAGCGTTTCTGCCATCGGCCGCTTTTACTAAAACATCGAGCTTTGCTGCATAACGAGATAAGGAAATATCCCTGTGAAAATTGTACCAAGGTATTTTGTGATCCATCGAATTTACAGCGACATATTCGTAACCATCACATTGGAGCCAGAAGTCACGCTTGCCCTGAGTGCGGTAAAACGTTTGCTACCTCGTCTGGTCTTAAACAACACACGCACATACACTCCTCTGTTAAACCTTTCCAGTGTGAGGTCTGCTTTAAAGCCTATACGCAGTTCTCGAACTTGTGCCGACACAGGCGCATGCATGTCGATTGTCGCATACAGATAAAGTGCAGCAAGTGTGGTCAGAGTTTTAGTACGGTGACCTCTTTGTCCAAGCACAAACGGTTCTGTGATTCCACCAACGTACCGCCGGCGGGAGTAGGTTTGTCACCCAGTCTAGCACACTCTTTGCATCATCAAACGCCCAACCAGTCACCCACACAAACAAGATCGTCTGGGGTAAACGGTTCTCTGGCCAACAACATGACTACTCCACCGAATCCGTTTTTGTTCTGGCGTTCCACCTTCTTTCCGGCATTTCCACCGGCTGCTGCTGCCTTTGGTTTGCAGGGCATGTTTCCCCAGGCGCCCGCTACCCAGACCACCAATTTTGCTCCCATGTTCTCCAAAGCCAATGTGGACTTTAAACTGCAACAACTCAGATGCCAGCCGGCTGCTAATAGCCTCAACCACAAcctcaataacaataatatcaataacaataaaaccaaTCCCTCCCTGGCCATTAGTCCTGCCAAGGAGGTTGTTAATGCCGCCGCAAATCAAGAAGCATTTGGCCTGTATTTTCCCAAATTCGAAATGGAGCAAAAACTTAAACGCGACAGAAACTCAGCTGATAGtcatcatataaaatataaaagagaaGCTCAACGTTTTTCTTCCGACGAAGAGTCCCTGCAGACAAAAGAAACCACCACCAAACAtgatatgaatataaaaaaagaaacgcatACCAAAACGAAAAAAGAGGAGGATGATGAAGTTTCCCTGAGAATGAATGAAGATGATAAGAAATCCATTGATATTGTCTCGGTGTCACCACAACACGAAGCTGAAACTAAAAGCTCCTACACAGAACTGCCTTTAGATCTTAGTGTGTCGCGCAAAAGAAGCAGCATTGACTCAAATTTCAGTCAACCGTCAGCGGAGCAGAAATCTACACGTGAAATTAATAACTCCTCTATCAGCATTCAAGACATCAGTCCCATAGCCCATGAAGAACTTAGCAATGCCGACAGTTATGAACAGTCTACGAAAAAGCAAAGAATTTTCAATTCTTCGGTAAATAGCAGTCGCACTCCCACAGCTTCTCCGGGACCCACACCCTCTCCCTCACCACCCTGCAATGTAACCAGCTCGGCTAACCATGAAAATAATACAGCCTCCCTGCCCACTTGCCCCCGGCCTATACATCCCATGCTGCTCGATGAAATCTATCGCACACATGCCTTGGAATCCACATTTCAGCGTCCGTTCCCTTTTTTAGGACTAATGGGCGAACGGGCGTCTTTAGAGGCCAATGCATTACGCGCTAGAGAAGAGCAATTTGCCGCCGAACCCATGTTCCATGAGGCTTTGAGGGGCCTTTCAGCAGGAGCTCTGCAAGTGGCCCAGTCGGGCAAATTAAAAGATCGCTATACCTGCAAGTTCTGCGGCAAAGTTTTCCCCCGTTCGGCCAACTTAACGCGCCACCTAAGAACTCACACCGGCGAACAGCCCTATACCTGTAAATATTGTGATCGTGCTTTTAGCATCTCCTCAAATCTGCAAAGACATGTACGCAATATACACAACAAGGAACGACCTTTCAGATGCCATTTATGTGATAGATGCTTTGGCCAGCAAACAAATCTGGATCGGCATTTGAAGAAGCACGAATCGGATACCACGGGCCTGGGTTTGGCCATCAGTGATTCGCCCAGTTCGAATGAGGCCGATCGTGAGGATTCCTGTTTCGATGAAATACGCAACTTCATGGATCGTGTCACCTACAATGAGGATTTGTACACGCCCTCCAGCATAGGCAATGCGGAAAATGATACCGACTACAATGCCAGCGACAATGATAATGAGCTATCGGTTTCACGGCCCTCATCGGCAGATTTAACTAATGATCACCCCAAAACTACTGAGGCTAATGAAATCTTAGAGgatgattaa
Protein Sequence: MHQGLKGLRRTTAARKLLSLAQEENSSTGDDYEFGGAFKQYPNNLASPDSTNTLRLATNTNDLNNYQHNTHQHLHHQRHNGYSQSNSPSRTLGIDSTTLVNTLPHSPAHMEHLFSSKLQAERLLLELTRLQEPICDLKSSENGVVAKQHLRRGTRFGPFAITESTEKSNAWDILPMSHIRSLLEPSPEVKLLLKKIRTSSNLDCEKEANFNNFYVAGCLWYESNRDIEAGEEIIIDGRPKTLYEHNELLANGEMHNGSSIHSSDDRSERDNASFYGSNINREDDYKKDKSSDQIKSELSDDENGFDIRCEVCDKVFIELEGLDDHLVGAHHFRKDEFVCELCSQRFCHRPLLLKHRALLHNEIRKYPCENCTKVFCDPSNLQRHIRNHHIGARSHACPECGKTFATSSGLKQHTHIHSSVKPFQCEVCFKAYTQFSNLCRHRRMHVDCRIQIKCSKCGQSFSTVTSLSKHKRFCDSTNVPPAGVGLSPSLAHSLHHQTPNQSPTQTRSSGVNGSLANNMTTPPNPFLFWRSTFFPAFPPAAAAFGLQGMFPQAPATQTTNFAPMFSKANVDFKLQQLRCQPAANSLNHNLNNNNINNNKTNPSLAISPAKEVVNAAANQEAFGLYFPKFEMEQKLKRDRNSADSHHIKYKREAQRFSSDEESLQTKETTTKHDMNIKKETHTKTKKEEDDEVSLRMNEDDKKSIDIVSVSPQHEAETKSSYTELPLDLSVSRKRSSIDSNFSQPSAEQKSTREINNSSISIQDISPIAHEELSNADSYEQSTKKQRIFNSSVNSSRTPTASPGPTPSPSPPCNVTSSANHENNTASLPTCPRPIHPMLLDEIYRTHALESTFQRPFPFLGLMGERASLEANALRAREEQFAAEPMFHEALRGLSAGALQVAQSGKLKDRYTCKFCGKVFPRSANLTRHLRTHTGEQPYTCKYCDRAFSISSNLQRHVRNIHNKERPFRCHLCDRCFGQQTNLDRHLKKHESDTTGLGLAISDSPSSNEADREDSCFDEIRNFMDRVTYNEDLYTPSSIGNAENDTDYNASDNDNELSVSRPSSADLTNDHPKTTEANEILEDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01235976;
90% Identity: iTF_00259090;
80% Identity: -