Bbay013483.1
Basic Information
- Insect
- Bellardia bayeri
- Gene Symbol
- ZBTB41
- Assembly
- GCA_950370525.1
- Location
- OX493266.1:7357942-7361232[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.00011 0.0088 17.3 1.0 1 23 212 235 212 235 0.92 2 15 4.7e-06 0.00038 21.6 1.8 1 23 238 260 238 260 0.99 3 15 0.00035 0.028 15.7 0.2 2 23 268 291 267 291 0.95 4 15 0.00082 0.067 14.5 0.2 1 23 297 321 297 321 0.96 5 15 0.0032 0.26 12.6 1.1 3 23 327 347 326 347 0.97 6 15 0.31 26 6.4 0.1 3 23 386 407 384 407 0.94 7 15 3.2e-05 0.0026 19.0 0.2 2 23 429 452 428 452 0.95 8 15 0.00033 0.027 15.7 0.2 1 23 458 482 458 482 0.97 9 15 0.12 9.4 7.7 1.0 2 23 487 508 487 508 0.97 10 15 1.6e-05 0.0013 19.9 0.4 1 23 514 536 514 536 0.98 11 15 0.0003 0.025 15.9 3.0 1 23 542 564 542 564 0.97 12 15 0.00024 0.019 16.2 3.5 1 21 570 590 570 593 0.96 13 15 3e-05 0.0025 19.0 1.3 2 23 632 654 631 654 0.97 14 15 0.052 4.2 8.9 2.9 1 23 673 692 673 692 0.84 15 15 0.00047 0.038 15.3 0.8 1 23 698 721 698 721 0.97
Sequence Information
- Coding Sequence
- ATGTTAAAAGTTGCACTACCTATCAACCTAAGCCAACAGAGAAAATCAAAGTGTGGGGAAATATTTTTCCATAGTTTTACAGATTTCACGAtttattgttgcttttgtaatttcaaattattcacTTTCGAAGACTTCCTTTTGCACATACAAAATGtgcattttgtaaacaatttactaaaaaatcaaacaataacAGAGCTTTGTCAGCAACTAacgaaaaaaaatgttgataatgCAATCACAGAAGTGATTGAACCCAAGAAAGAGTTGGATAGGTTTGAAAGTGATGCTTTAAATGACAATAATGACAATTTTGAAGAAGCTCTTAGTATATTTGAAGTCGCGCCTAAGTACAAGGAGACGTCGGAAAGTGAAGCTTCATATGACGACGATTTTGAAGATACTGGTAGTTATTTTGAGGACGATAGTTCTGAAGAGTCGCTGCTCAAGGTGTTAAACATTAAGCCAGAAAAAATACCATGGAAGGGGAAACAGACAAAATGTGCAAACTCAAGTAAAGGTACAGAAGGGAATGTTCTAGCTGATGGGTTGCAACTAAATCAGCCTCAAGAGGAAGAAACAAATGAAAGTTCTTCCGATGAATCAGAAAAACACTGTAAAGAAAAAGATTTTGCATGTGATGAATGCCAGAAGACATTTCCACGTAAAAAATTGTTGCATCAGCATGTTATTGAACTGCACAATGGCTATAAATGCTCTGTATGCGACAAGCGATATCGTCGACAACTACAGCTCAGAGTACACTTACAGAGTCACACCACAGAAAAAGCACATATATATTGCCCCATTGCACAATGTAGACGAATATTCAGTAATCAAAAAAATCTTGATCGTCATCTTGAGGTCCATACAATGGAATGTACTTTCGTATGTGACATTGAAAATTGTGGAAAAGCTTTTCCAACTCAACGTCGACTAATAACACACACCTATTCACATAACAAACGCAACATATGTGACACTTGCGGCTATAGCTGTCGTTCATTTGCGACATTAGTTATACACAAGCGTGTTCACACAGGAGAGCGGCCTTTTCCTTGTGAGTTATATCATAAACTACCTAACGAGGAAGCAACAAATGCAGGTTCTTGTGATAATTCACAGCAAACTCATAAAGATCAAGAATTTGGTTGCGCCGAATGTAAGCAGATATTTGAAAGTAAAGAAGTTTTTGATAAACATATTTTGGAATTGCATAACGGTCAACAACTACAGCTATGTGAACGCTTAGACAACGATAccaatgaaacaaaaaacatccCTTGCCCCAGACTAGAATGTAGACGAACATTCGCTAGTCAGAAAAACCTTAATCGTCATCTGGAGGTACATACATTAGATAGCACTTTTGTAtgtgattttgaaaattgtggTAAAGCTTTTCCAACAAAACCTCGTCTAATAATACACAGTCGCACGCATAACAAACACAACGTATGTGATATTTGCGGCTATAGATGTCATGCTTACGCGACATTAGTGATACACAAACGTGTACATACCGGAGAGAGACCTTTTACTTGTAATGTATGCGAAAAACGTTTCATTTCGAAAACAGGCTTGTTAGAACACATGTCTGTCCATACCATCACACGTTCACATGTCTGTCAGATTTGTAAAGCGGCATTTACGAATTTTAAATCTTTGCGTCGCCACAAATTGACTCACACTAATGAAAGGAACTATAAATGCAAATTATGCGATAAAGCGTTTAAGACATACAATGGTTTGGATAATCATATGAGATGTATGCATCGTGAGCCTAAATCCTTGAATCTTCCTAAAGACGTAGATTGTACAGCTAAAAATTTTGAAGAGTTcactctcaaaaaaatcaagaagCCGGAAAATTCTGTTAAAAAGGAATTGAAATGTAAAGTCTGTAATAAAGCTTTTAAACGTATCAATGGTTTGGATAATCACATGAGACGTTTTCATGGAGAAACTGATTCTTCAATAGCTGAGAGTTATGAAAATTccgataaaaagaaatttaaatgcaatttgtGTAATAAGAAATTTACCTCATTGACTCGTCACAATTTAACACATACCGATGATAGAAAATTTGAGTGCCAACTATgtgataatatttttaaaacttacaatGGCTTAAACAGCCATATAAAACGTATGCATGAAGATCAGGATGTTGGGCAAGTTAATAAAGGCATAAGCAATGCTGAAAGTTCAGAAGAATTAAACCGAGACCTGAGTTAA
- Protein Sequence
- MLKVALPINLSQQRKSKCGEIFFHSFTDFTIYCCFCNFKLFTFEDFLLHIQNVHFVNNLLKNQTITELCQQLTKKNVDNAITEVIEPKKELDRFESDALNDNNDNFEEALSIFEVAPKYKETSESEASYDDDFEDTGSYFEDDSSEESLLKVLNIKPEKIPWKGKQTKCANSSKGTEGNVLADGLQLNQPQEEETNESSSDESEKHCKEKDFACDECQKTFPRKKLLHQHVIELHNGYKCSVCDKRYRRQLQLRVHLQSHTTEKAHIYCPIAQCRRIFSNQKNLDRHLEVHTMECTFVCDIENCGKAFPTQRRLITHTYSHNKRNICDTCGYSCRSFATLVIHKRVHTGERPFPCELYHKLPNEEATNAGSCDNSQQTHKDQEFGCAECKQIFESKEVFDKHILELHNGQQLQLCERLDNDTNETKNIPCPRLECRRTFASQKNLNRHLEVHTLDSTFVCDFENCGKAFPTKPRLIIHSRTHNKHNVCDICGYRCHAYATLVIHKRVHTGERPFTCNVCEKRFISKTGLLEHMSVHTITRSHVCQICKAAFTNFKSLRRHKLTHTNERNYKCKLCDKAFKTYNGLDNHMRCMHREPKSLNLPKDVDCTAKNFEEFTLKKIKKPENSVKKELKCKVCNKAFKRINGLDNHMRRFHGETDSSIAESYENSDKKKFKCNLCNKKFTSLTRHNLTHTDDRKFECQLCDNIFKTYNGLNSHIKRMHEDQDVGQVNKGISNAESSEELNRDLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -