Basic Information

Insect: Bellardia bayeri
Gene Symbol: -
Assembly: GCA_950370525.1
Location: OX493268.1:84570387-84579188[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.019 1.6 10.2 1.6 2 23 235 257 234 258 0.94

2 12 0.2 17 7.0 0.2 6 23 266 283 266 283 0.98

3 12 4.9e-06 0.00039 21.5 2.4 1 23 289 312 289 312 0.97

4 12 9e-07 7.3e-05 23.8 3.5 1 23 321 343 321 343 0.96

5 12 0.00079 0.064 14.6 0.2 1 23 351 374 351 374 0.94

6 12 0.00019 0.015 16.5 0.3 3 23 382 402 381 402 0.97

7 12 0.028 2.3 9.7 0.1 2 23 411 433 410 433 0.92

8 12 0.00034 0.028 15.7 1.2 1 23 441 464 441 464 0.96

9 12 5.7e-06 0.00047 21.3 0.8 1 23 470 492 470 492 0.98

10 12 4e-06 0.00032 21.8 1.3 1 23 498 521 498 521 0.98

11 12 2.9e-06 0.00024 22.2 1.6 1 23 537 560 537 560 0.97

12 12 8.8e-05 0.0072 17.6 1.2 1 23 569 591 569 591 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.019	1.6	10.2	1.6	2	23	235	257	234	258	0.94
2	12	0.2	17	7.0	0.2	6	23	266	283	266	283	0.98
3	12	4.9e-06	0.00039	21.5	2.4	1	23	289	312	289	312	0.97
4	12	9e-07	7.3e-05	23.8	3.5	1	23	321	343	321	343	0.96
5	12	0.00079	0.064	14.6	0.2	1	23	351	374	351	374	0.94
6	12	0.00019	0.015	16.5	0.3	3	23	382	402	381	402	0.97
7	12	0.028	2.3	9.7	0.1	2	23	411	433	410	433	0.92
8	12	0.00034	0.028	15.7	1.2	1	23	441	464	441	464	0.96
9	12	5.7e-06	0.00047	21.3	0.8	1	23	470	492	470	492	0.98
10	12	4e-06	0.00032	21.8	1.3	1	23	498	521	498	521	0.98
11	12	2.9e-06	0.00024	22.2	1.6	1	23	537	560	537	560	0.97
12	12	8.8e-05	0.0072	17.6	1.2	1	23	569	591	569	591	0.97

Sequence Information

Coding Sequence: atggaCTCCTGTTTACTGTGCCttcaatttaataaagaattacAACGTTTCCTGGAAGCAAACTCCAAGCGATGGCAAGAACTTAACATAACAAAAGTGCTAGAGAAACATTTCTGGCCATTGAACACCATTCATCCCAGCTCTTGGATGTGCTTGTCTTGCTGGCAAAAGCTGGACGACTTTAATAATTTCTACTTGAGTATAGAAGAGGCTCATTTTAATTTAggagaaattaaaattgaagaaaatcaaTTGATGTACAAAGAGGAAATTACAAAtcaagaaaatgaaaaattttcattatgttGTCTTGGGCCGGAAATACTGATGGAACAGAATGAACTGGGAGTGTTAAGCGATGACAAAGAATCCTCATCAAACCGTAAAAAGAAAAGACAAGGTTTAGAtgaaaatagtattttaaaaaaggaTCCTTTAGCAAAAACCAAAGTCACAAAACctagaattataaaaaaattaaaaacaataacttcAACAGAAACTATTACACCAGGACAAAACGAAGAAGATCTGAAAATTAAATCAGAGCCAGCGGATATTCTAAATAGCGATTGCTCTGATAGTATGAATGATGAAGATAACGATGATGAACCGTGTGCATCCTCCTCTGACTccgccaaaaataaaaaaataaataaaaaggaaaacgaTAAATGCATAGctgaacattttaaacaattgtcttGTGATCTTTGTGACAATTCATTTGAAGACTTTTCGGCCATGCAGAAACACTTCACAACAATGCACCATCAAAAAGGATATCTAGTTTGTTGCAACCGAAAATTCTACCGACGCACTCCATTAGTTGAGCACCTACAAATACATTTGAATCCTGAGCGTTTCAAATGTACACACTGTGGCAAAGTCCTATCCAGTCCAAGAAGTTTTAAAAATCACATGCTGAGTTTACATCGACCAAGTGATGTGATTTTGACCCATATTTGTGAAATCTGTGACAAGTCTTTTACGCAAAAATCCTTATTGCGCAAgcataaattaaaacatttacccGAAGAAGAGAAAAAGTTCCCTTGTACAGAATGTGGAAAATTttacGCCTCTCCCTACATcttaaataaacacacacaagccgttcatttaaaaaagtttgttaaaatctgttttatatgcggtaaagctttaaaaactaaagccgagtacaaaatacatatggacAAACATGAAGGTATACCACAGCCGATTATAAGTTGTGATGTATGCGGTTTACGTTTGACCAGCGCAAGAGGTCTAAAGATTCACAAAGAAAATCAACATCCTGTGGGTGGCAAAAAAGAACATCATTGCCCTATATGTCCCAAAATTTCGCCTACTCTTAAGGCTCTACGTAAACATGTCAATACTATGCATAAACAGGGTTACGAACACAAATGCACCATCTGTGAAAAGGCTTTTAAGAGGGCTGACGTTCTAAGGGATCATATGGCTTCGCATACCGGAACGCCTTTATACACGTGTCCTTGGTGTCCGAAAACATTCAATTCAAATGGTAATATGCATGCTCACCGCAAGAAAGTCCATCCCAAAGAATGGGAGGAAGCCAAACTTCAAAAATATGCGGATCACTTTAAATGTACTCAATGTGGCAAAGTACTGTCCGATCGAAAGAATTTTAAAAGTCATATGTTGCGTGTACATCGACCAAAAGATGTTGTTTTGAAACATTCTTGTGATATTTGTGGTAAGTCTTTTGCCCAGGGCTATGTTTTGCGCACCCACAAATTAACGCATTTGCCCTAA
Protein Sequence: MDSCLLCLQFNKELQRFLEANSKRWQELNITKVLEKHFWPLNTIHPSSWMCLSCWQKLDDFNNFYLSIEEAHFNLGEIKIEENQLMYKEEITNQENEKFSLCCLGPEILMEQNELGVLSDDKESSSNRKKKRQGLDENSILKKDPLAKTKVTKPRIIKKLKTITSTETITPGQNEEDLKIKSEPADILNSDCSDSMNDEDNDDEPCASSSDSAKNKKINKKENDKCIAEHFKQLSCDLCDNSFEDFSAMQKHFTTMHHQKGYLVCCNRKFYRRTPLVEHLQIHLNPERFKCTHCGKVLSSPRSFKNHMLSLHRPSDVILTHICEICDKSFTQKSLLRKHKLKHLPEEEKKFPCTECGKFYASPYILNKHTQAVHLKKFVKICFICGKALKTKAEYKIHMDKHEGIPQPIISCDVCGLRLTSARGLKIHKENQHPVGGKKEHHCPICPKISPTLKALRKHVNTMHKQGYEHKCTICEKAFKRADVLRDHMASHTGTPLYTCPWCPKTFNSNGNMHAHRKKVHPKEWEEAKLQKYADHFKCTQCGKVLSDRKNFKSHMLRVHRPKDVVLKHSCDICGKSFAQGYVLRTHKLTHLP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -