Basic Information

Insect: Bellardia bayeri
Gene Symbol: -
Assembly: GCA_950370525.1
Location: OX493266.1:7329115-7331607[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 5.1e-05 0.0041 18.3 3.8 1 23 96 118 96 118 0.98

2 16 4.6e-05 0.0037 18.5 3.1 1 23 123 145 123 145 0.98

3 16 0.0015 0.12 13.7 2.7 1 23 148 170 148 170 0.93

4 16 0.07 5.7 8.4 1.0 1 23 176 200 176 200 0.96

5 16 0.0082 0.67 11.4 0.3 1 23 206 228 206 228 0.98

6 16 0.00058 0.047 15.0 0.3 1 19 234 252 234 254 0.92

7 16 0.00032 0.026 15.8 4.8 1 23 262 284 262 284 0.94

8 16 4.1e-06 0.00033 21.7 0.0 1 23 290 312 290 312 0.98

9 16 0.0015 0.12 13.7 4.4 1 23 391 414 391 414 0.96

10 16 4.1e-06 0.00033 21.8 2.8 1 23 419 441 419 441 0.99

11 16 0.00021 0.017 16.4 0.5 1 23 444 466 444 466 0.96

12 16 0.0008 0.065 14.6 0.5 3 23 474 496 472 496 0.92

13 16 0.0034 0.28 12.6 0.2 1 23 502 524 502 524 0.98

14 16 5.4e-05 0.0044 18.2 1.6 1 23 530 552 530 552 0.97

15 16 0.00037 0.03 15.6 5.0 1 23 558 580 558 580 0.96

16 16 2e-05 0.0016 19.6 0.1 1 23 586 608 586 608 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	5.1e-05	0.0041	18.3	3.8	1	23	96	118	96	118	0.98
2	16	4.6e-05	0.0037	18.5	3.1	1	23	123	145	123	145	0.98
3	16	0.0015	0.12	13.7	2.7	1	23	148	170	148	170	0.93
4	16	0.07	5.7	8.4	1.0	1	23	176	200	176	200	0.96
5	16	0.0082	0.67	11.4	0.3	1	23	206	228	206	228	0.98
6	16	0.00058	0.047	15.0	0.3	1	19	234	252	234	254	0.92
7	16	0.00032	0.026	15.8	4.8	1	23	262	284	262	284	0.94
8	16	4.1e-06	0.00033	21.7	0.0	1	23	290	312	290	312	0.98
9	16	0.0015	0.12	13.7	4.4	1	23	391	414	391	414	0.96
10	16	4.1e-06	0.00033	21.8	2.8	1	23	419	441	419	441	0.99
11	16	0.00021	0.017	16.4	0.5	1	23	444	466	444	466	0.96
12	16	0.0008	0.065	14.6	0.5	3	23	474	496	472	496	0.92
13	16	0.0034	0.28	12.6	0.2	1	23	502	524	502	524	0.98
14	16	5.4e-05	0.0044	18.2	1.6	1	23	530	552	530	552	0.97
15	16	0.00037	0.03	15.6	5.0	1	23	558	580	558	580	0.96
16	16	2e-05	0.0016	19.6	0.1	1	23	586	608	586	608	0.99

Sequence Information

Coding Sequence: ATGGCAGATGGAAATGATATCACGAAAACAGATATTGGTAATGAAGATGTCGTAAAAACCGAGGTGTATGAGGAACAGAATATTTTGTGTGAAGAATATAATTTGTCAGATGCTAATGAGGACCATGAAACAAATGATCCAGACAAATGGATTCAGGAAAAGAATCCATATCAAAGCGATAATAATAGCAGTTCTAATACTAACGAAGACGCGTTAAGTGATATACAGGAAACaataagtatattaaaaaagAAATTTAAATCAACCAAACAAAAGCAACGactttttaaatgtagtttatGTACACGTTCATTTGCCAACAACTCTCACTATGAAGTTCATAGACTAAAACATGAAAGTTTTCAGTTCAAATGTGATAAATGCAGCAAATCCTTTAACAAAGAGATTCAACTTACTCAGCATCAGTACACTCACAACGGTTATTCCTGTAAGATTTGTAATAAAGTATTTAAGAAATATGATTCTCTGCGTTTTCACAATGAAACACATATTGAAACGAAAAATTTCGTATGCGATTATAAAAACTGCTCGAAAGCTTTTGTTAACATACGACGGCTTAAAGGTCACAAACGTTTACATTTTCTCGAAGCGACATTTGTTTGTGAGGTATGTGGATCGCGGCAGCGTAATAAGAAAGCCCTAACCGATCACGCAAGAACTCATACAGGTGAAAAACCTTTTGCTTGTCCTTTATGTGATCGTCACTTTACTACTAAATCTTTGCTGGGAGAACATAAAGCCTGCCATGAAACGGAACGCAAGCATATATGTGATGTGTGTGGCAAAAGTTTTAATCGCCCAAAAGCTTTATATCatcataaacatttacatttggccgttaaaaaatttgtgtgtAAAATGTGTGGTGCTGCCTTTGCACAGGCCGCTGGTTTATCAGCTCATATGCGTAAACATAAACAGgaaCATGAAACAGATGTAGAAGATATTAAAACCCAGTTTAATATTGATAACCTGACAATTGATAATAAACCAAATGAAGGGCTGATAAACACTGATGGTAAGATAGAGGAGGCAATTAGTATTAATGAATTGGACAATGAGGACAGTGATTCAGAGGATTTGGAGTCAAAACCATTGGTGATATTAAAAAagGCAACTAACAAATCAGAAACCTCTAAAGAAAAACGTTTTGAATGTACAGAATGTAAACGAAAGTTTACCACAAAATTCTATTTACGATTTCATATACGGCAACAACATGAACCAAAAAATTTCCAATGtgataaatgtaataaatcatTTGTGGAGAAACGTTATCTAACATTGCACCAGCGCTCACACATCGGCTACACCTGCCAAATATGCAATAAAGTCTTTGATAAATATGAGGCACTGCGTTATCATGGCGAAAGTCATATAGAATCGAGGAATTTTCTGTGTGATTACGAAAATTGTGGCAAAGCTTTTCCCAATAATCGTCGCCTGAGTGCCCACAAGCGTAGTCACTTTGCTCGGCCCTCATTTGTGTGCGAGATATGTGGTTCACGGCAACGCAGCAAAGAGTTTTTAATCGTTCACATACGCACGCATACTGGTGAAAAGCCGTATGCTTGTAATCAATGTGATAGACGTTTTGCCTCCAAACATTTCCTACAAGATCATCAAGCCGTACATGCTACAGAACGCTCGCATGTGTGCACAGTTTGTGGTAAGGCCTTCGCCAGCAGTAAATCACTCTATCATCATCGCCATCTGCACTCAGGGATTAAGAaatatgtgtgtaaaatttgtaATAGTGCATATTCACAGGCGGCCGGTCTATCAGCTCATATGCGTAAACATAAACAGGATAGTGGTCTATTGGATACGGATGAAACAATGGTGGGAGAgagtaataaattttgttaa
Protein Sequence: MADGNDITKTDIGNEDVVKTEVYEEQNILCEEYNLSDANEDHETNDPDKWIQEKNPYQSDNNSSSNTNEDALSDIQETISILKKKFKSTKQKQRLFKCSLCTRSFANNSHYEVHRLKHESFQFKCDKCSKSFNKEIQLTQHQYTHNGYSCKICNKVFKKYDSLRFHNETHIETKNFVCDYKNCSKAFVNIRRLKGHKRLHFLEATFVCEVCGSRQRNKKALTDHARTHTGEKPFACPLCDRHFTTKSLLGEHKACHETERKHICDVCGKSFNRPKALYHHKHLHLAVKKFVCKMCGAAFAQAAGLSAHMRKHKQEHETDVEDIKTQFNIDNLTIDNKPNEGLINTDGKIEEAISINELDNEDSDSEDLESKPLVILKKATNKSETSKEKRFECTECKRKFTTKFYLRFHIRQQHEPKNFQCDKCNKSFVEKRYLTLHQRSHIGYTCQICNKVFDKYEALRYHGESHIESRNFLCDYENCGKAFPNNRRLSAHKRSHFARPSFVCEICGSRQRSKEFLIVHIRTHTGEKPYACNQCDRRFASKHFLQDHQAVHATERSHVCTVCGKAFASSKSLYHHRHLHSGIKKYVCKICNSAYSQAAGLSAHMRKHKQDSGLLDTDETMVGESNKFC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -