Bbay019133.1
Basic Information
- Insect
- Bellardia bayeri
- Gene Symbol
- -
- Assembly
- GCA_950370525.1
- Location
- OX493267.1:5754626-5755708[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.8e-09 6.9e-06 26.5 0.0 3 41 15 53 13 56 0.91
Sequence Information
- Coding Sequence
- ATGGCTACCAAAGGAAAAAGATCTATTCACAGATATTCAGAGAAGTCACTACAAAATGCACTAGCAGAAATAAGACACGGAGGAGCCTCAATATTAGGAGCCAGTGTAAAATATGGTGTTCCACGATCCACTATTCAAGACCGAATTCATGGTCGAGTTTTTGAGGGCCCTCGCAGAATGGGACCACCAACCATTCTAACAAAAGCAGAAGAGCACCGTTTGGAAAACTGGTGCAATGACTTGGCAAAATGTGGATTTCCACTAAAAATAGACGACTTGCTGAATACGgttcaattaataattaaaaaagatgaACGAACTACGCCATTTGCAAATGATCGTCCAGGAAGTAAATGGTTCGCAAATTTTTACAAACGCCATCCCGGTTTGGCGCTTAGAGAAGCTGAAGGAATAAGTAAAGGGCGTGCTGTTATAACTGAAGAAAGTATTAGAAAATGGTTTGAAAAGTTAAAAAGCTTCTTAAGTCAGGAAAATGCCCTTGATATTTTGGATGATCCAGATCGAATTTTTAATGATGACGAAGCAAGTGTCTGTATGTGCCCAAAAACTGGAAGAGTAATAGCTCCTAAAGGTTATCGCAATGTTTGTTACTCCTTCAATCTAAATTTTACAGGTTCAACAGCATTGAAAAATCCTGAATCTTCGGTGTCACCATCTTTTGCAAGTCATCTATATTTTCCAAAGCCCTCATCGTCtgctcaaataaaaacaaaaacaaaggcTCCAAATGCTATTTCTGCCCTAGCATGGAGAGAGCATATTAAGTCGAAGGAAAATGAAAAGCTAGCTAAAGCGGAAGCAGTTAAAGAGCGGAAACTTAAAcgtgaaaaaaggaaaaaagaaaaaggaaacaAGCCCgccaaacttaaaaaatttaaagagaaaGAAATATGCAGTGAGGAGTTGATCTCTGACGCTGAAGATGATGCTCTAAAAAACGTTGGGTGTGATACGTGCCCTCAGTGGTATCATCTTAAGTGCActgaatttaaaaatctaaaatacagTGATATTAGTGAATTAGATTTTGTATGCAAAgcatgcacagaaaaaaatatttaa
- Protein Sequence
- MATKGKRSIHRYSEKSLQNALAEIRHGGASILGASVKYGVPRSTIQDRIHGRVFEGPRRMGPPTILTKAEEHRLENWCNDLAKCGFPLKIDDLLNTVQLIIKKDERTTPFANDRPGSKWFANFYKRHPGLALREAEGISKGRAVITEESIRKWFEKLKSFLSQENALDILDDPDRIFNDDEASVCMCPKTGRVIAPKGYRNVCYSFNLNFTGSTALKNPESSVSPSFASHLYFPKPSSSAQIKTKTKAPNAISALAWREHIKSKENEKLAKAEAVKERKLKREKRKKEKGNKPAKLKKFKEKEICSEELISDAEDDALKNVGCDTCPQWYHLKCTEFKNLKYSDISELDFVCKACTEKNI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00199804; iTF_00199806;
- 90% Identity
- iTF_00199804; iTF_00199806;
- 80% Identity
- -