Bbay026122.1
Basic Information
- Insect
- Bellardia bayeri
- Gene Symbol
- retn
- Assembly
- GCA_950370525.1
- Location
- OX493268.1:38713653-38734061[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-20 1.9e-16 61.1 0.0 9 89 35 119 27 119 0.87 2 2 2.5 1.2e+04 -2.4 0.2 9 29 254 276 246 294 0.54
Sequence Information
- Coding Sequence
- ATGATTAAACtcaattataacaaaatttatctcACCTGTTCGTACATCCCTCCTAATTCCGATGAATTAGTTTATCAACAACATGTTAATGCTATTAAAACTATTGCGGAATTTGTTGAACCTGAGGATTCGTTCTTTGCTTTCGGCACACCCATCAATCGTTTGCCAATAATGGCAAAATCAGTGTTGGATCTTTATGAACTGTATAATTTAGTGATTGCTCGAGGAGGTCTCGTCGATGTCATTAACAAAAAGTTGTGGCAGGAAATTATAAAGGGACTTCATCTGCCATCGAGTATAACAAGTGCAGCGTTCACACTACGAACACAatatatgaaatatttgtatcCATATGAATGCGAGAAGAAAAATCTAAGTACGCCAGCCGAATTGCAGGCTGCAATTGATGGCAATCGTCGGGAAGGGCGTCGTTCCAGTTATGGTCAATATGAGGCAATGCACAATCAAATGCAAATGCCTCAAATGGGTCGCCAATCTTTGCCAGGCGGCATGCAACAGATGTCTCCGTTAGCTTTGGTAACACACGCGGCTAACAATCAACAAGCACAGGCTGCAGCAGCTGCTGCGGCTGCACACCACAGACTCTCGTTTGGCCAAGTGCCGAATTTAGTAACACAGGAAATTGAACAGCGTATGATCgagtatttaaaactaattcaaGTAAAGAAGGAACAAAATGCTATTAGCAATGGTGCGGGCCCCATGGGTCTTCCGCCTCAccaccaacatcatcagcagcaacaacagcagcatcaggaacaacagcaacagcgcCAGAGATCTCAAAGTCCCGAGATAAACACAAGAGAAGCCTTGAATGCTTTGGAAATGTCACGCGTAGCATTGTGGCAAATGTACCATAACAACACCAGTCCTCCAGCTTCTGTGAACACCTCAccacaaggtgatggcaatgtAAACAGTGGTGGAAGTCATGATGTTGGTGGCGAAGCAGAACGTAGCGAGGCATTAAACCTCTCGGATTCACCACCGAATCTCTCCTCAATTAAGCGTGAGCGTGAACGTGAACCCAGCCCGGAAATTAATGAACACAATGATTTTCACCACCAACCACCTCCAGCTAAGCGTGCCGCATTTCCTGCCAGTTTCTACTTACCTCCCGGCATGGGTGGCATGGCTGCTGCTGCCGCTGCGGCCAACTTTCACTATAAAGGTGGCCAGCACGATTCCGATGCTGAGGCTGACGAAGAAAACGACGATTGCGAAGGCGACCATAATACAACAGCAAATTCCTCGCACGATGACCCCAACGAACGCCAGCATTTAAATGGCAGTTCTCAGCGAGCACCTCGGCATCATGGCAGTAACAGCAGTGTTCACAATGACAAGTCAGACGACTCTGCCATTGAAAATTCCCCTTCCACCTCAGCGGCGTCGGCCGGTAATGGTCACATTTCACCCATATCTACTAAGAAAATACACTTGTCAAAACAGactcaacaacaacagcaacacaacACAGTAGCGGCGAACCCTAACCCTAACGCTGCCACACCTGCTGACAATACGACGACGGGTAACTCTCCCCCGCTGGATCCATTCGAGGCATTGAATTTGCTCTCTGGAATGCAATTCCGTCTAACACGCAACGGTACCAATCCTAATGGCGAACAAGAGTTAGTGGTTAACCTTGAACTAAACGGCATTAAATACTCTGGTATACTTATTTCAAACACATCAAAACTGACAACATCAATAGCGACGACATCTACCGAAACAGCAACGTCGACAACAACGATGTCGACAATCGGTGATAACAGCTTCAGCAACAACAAACATGCCAACAATTCCAACAAAAGCGATAACAACATTACAATCAGTAGCCGCCCGAACAGCAGTCACAGTCCCACACACAGCATTATTAACAACAGTGAAACTGTCAAGTCGTTGGTCGTTGCCATGGATGCAGTAGAAGACACGACTGCATTTACAATGCGTGATACTGAAACACCTCCAACCACATCCATGACAGCAACACCACCAGCAATAGCAACGAATCAAACAAATGCTGTCATAGCAAATTGTCCCAACAGTACCACTAACACCCTCAAGAATGCCCTAATAACATCATAG
- Protein Sequence
- MIKLNYNKIYLTCSYIPPNSDELVYQQHVNAIKTIAEFVEPEDSFFAFGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMQMPQMGRQSLPGGMQQMSPLALVTHAANNQQAQAAAAAAAAHHRLSFGQVPNLVTQEIEQRMIEYLKLIQVKKEQNAISNGAGPMGLPPHHQHHQQQQQQHQEQQQQRQRSQSPEINTREALNALEMSRVALWQMYHNNTSPPASVNTSPQGDGNVNSGGSHDVGGEAERSEALNLSDSPPNLSSIKREREREPSPEINEHNDFHHQPPPAKRAAFPASFYLPPGMGGMAAAAAAANFHYKGGQHDSDAEADEENDDCEGDHNTTANSSHDDPNERQHLNGSSQRAPRHHGSNSSVHNDKSDDSAIENSPSTSAASAGNGHISPISTKKIHLSKQTQQQQQHNTVAANPNPNAATPADNTTTGNSPPLDPFEALNLLSGMQFRLTRNGTNPNGEQELVVNLELNGIKYSGILISNTSKLTTSIATTSTETATSTTTMSTIGDNSFSNNKHANNSNKSDNNITISSRPNSSHSPTHSIINNSETVKSLVVAMDAVEDTTAFTMRDTETPPTTSMTATPPAIATNQTNAVIANCPNSTTNTLKNALITS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01260775;
- 90% Identity
- -
- 80% Identity
- -