Bant002491.1
Basic Information
- Insect
- Belgica antarctica
- Gene Symbol
- ZNF217
- Assembly
- GCA_000775305.1
- Location
- Belgica.178:95465-97211[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.0022 0.091 12.6 3.1 1 23 109 132 109 132 0.95 2 10 0.0028 0.12 12.2 0.6 2 23 139 163 138 163 0.90 3 10 0.039 1.6 8.6 3.6 1 21 169 189 169 190 0.92 4 10 0.0015 0.061 13.1 2.3 2 23 209 231 208 231 0.95 5 10 0.4 17 5.5 1.1 2 23 239 262 238 266 0.88 6 10 0.00062 0.026 14.3 0.1 2 20 268 286 267 287 0.94 7 10 0.0096 0.39 10.6 5.1 2 23 310 331 309 332 0.93 8 10 0.0008 0.033 14.0 0.2 2 23 337 359 336 359 0.97 9 10 0.00054 0.022 14.5 5.2 1 23 365 387 365 387 0.96 10 10 0.063 2.6 8.0 1.2 1 23 393 416 393 416 0.96
Sequence Information
- Coding Sequence
- ATGAAAGCTGACCAGAAACTAAGAAGCAACATGACGAGACAACAGCGAAAACAAGAGCCAAACTCGCCAAGCAAGCAAATAACTAACAAATTAGTATCGAGCATAGCGGCTGAAGATCTTGAAACTGCCTCTTGTAATAGTCTAGAAACTGCTGTCTCAGTTCCAATTCCCAAAGAACCGGAAGCGTTAACAAGATCAGGTTTGCGTAAAAGGAAAGCAACGCCGGTAGAGTCACCAGTTCCACTCAAAAAGCATGTTCCCCAAATGAGTGATCAAAAAACCGTTCTTAAAACCACAGAACCAATAACAAATCaagaaagagttttcaatTGCGATCTATGCGAGTTCAAAAGCAATCGGAAACACAATTTGGAGAGACATCTGACTAGTTTGCACAtcaaatcaacgaaatttCTATGCACTTTTGTGGGATGTCAAAGACAATATACGACTCGCTCTGCATTAAAGCTTCACTTAGTTCGAGATCACGGTGAAAACTCTTCTTTTGACTGTGAGAAGTGCCATCAAAGGTTCAGCTGCCAGTCGCTccttaaaattcatgaacaaaGACTGACGTGTCGACCTCGAAAGAACAAGACTGCCCCGCCGGCTGAGAAGAAGCTTTCGTGCTCCAAGTGCGATTTCAAAACTGCTCATCAATTCTCTCTCAACCAGCATATGAACTTGATTCATCTGAACATCAGAAAGTCTTGGAAATGTGAACTGTGTGAAGACGCAGTCTTTTCAAACCGGATTTCGTTCAACCAGCACACGTTCACAGTTCATAACAAGACTCACGTGCGGTGCGCTGATTGTGATCAGAATTTCTCAACTGAAGCTCAACTAAAAGTTCACAAAGAATGCTTCAAATGCAAAGCTCGAAAAGCAACTGAAGATGACTTTAACGAGTCAGAAACTGGAGAGACGACTTGCAACTTGTGCAAAAGAAGCTACAAATCGAAAAAAGAATGGACGACTCACTACTTCAACCATCACAAGTTTAACACCACCTGTGACATTTGCAACGTCCAACTGGCAACGTATGCGTCGCTCAAGAATCACATCAAAACGATTCACGAGAAAGTTAGAGCGTTCGCTTGCAATGAATGCCCCAAGCGCTTCTCTCAAAAGCACACTCTCCAGTTTCATATGCACTTGCACCGTGGAGAAAAACCATTTGCCTGTAAATTCTGCGAGTTCAAAGCCGCTGATCGCAGTTCCATTTCTAAACAccagaaaaaacttcactcaCATAAGACTTAG
- Protein Sequence
- MKADQKLRSNMTRQQRKQEPNSPSKQITNKLVSSIAAEDLETASCNSLETAVSVPIPKEPEALTRSGLRKRKATPVESPVPLKKHVPQMSDQKTVLKTTEPITNQERVFNCDLCEFKSNRKHNLERHLTSLHIKSTKFLCTFVGCQRQYTTRSALKLHLVRDHGENSSFDCEKCHQRFSCQSLLKIHEQRLTCRPRKNKTAPPAEKKLSCSKCDFKTAHQFSLNQHMNLIHLNIRKSWKCELCEDAVFSNRISFNQHTFTVHNKTHVRCADCDQNFSTEAQLKVHKECFKCKARKATEDDFNESETGETTCNLCKRSYKSKKEWTTHYFNHHKFNTTCDICNVQLATYASLKNHIKTIHEKVRAFACNECPKRFSQKHTLQFHMHLHRGEKPFACKFCEFKAADRSSISKHQKKLHSHKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -