Basic Information

Insect: Belgica antarctica
Gene Symbol: zfh1
Assembly: GCA_000775305.1
Location: Belgica.115:6424-24261[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0013 0.054 13.3 0.2 2 23 44 66 43 66 0.95

2 9 0.063 2.6 8.0 0.4 2 23 120 144 119 144 0.89

3 9 0.0011 0.045 13.6 4.4 3 23 153 173 151 173 0.95

4 9 1.8e-06 7.6e-05 22.3 6.3 1 23 182 204 182 204 0.99

5 9 0.00011 0.0045 16.7 0.7 3 21 212 230 210 231 0.94

6 9 0.014 0.56 10.1 0.8 2 19 451 468 450 471 0.81

7 9 7.4e-06 0.0003 20.4 0.9 1 23 750 772 750 772 0.94

8 9 4.4e-05 0.0018 17.9 8.2 1 23 778 800 778 800 0.98

9 9 0.0023 0.093 12.5 3.5 1 21 806 826 806 827 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0013	0.054	13.3	0.2	2	23	44	66	43	66	0.95
2	9	0.063	2.6	8.0	0.4	2	23	120	144	119	144	0.89
3	9	0.0011	0.045	13.6	4.4	3	23	153	173	151	173	0.95
4	9	1.8e-06	7.6e-05	22.3	6.3	1	23	182	204	182	204	0.99
5	9	0.00011	0.0045	16.7	0.7	3	21	212	230	210	231	0.94
6	9	0.014	0.56	10.1	0.8	2	19	451	468	450	471	0.81
7	9	7.4e-06	0.0003	20.4	0.9	1	23	750	772	750	772	0.94
8	9	4.4e-05	0.0018	17.9	8.2	1	23	778	800	778	800	0.98
9	9	0.0023	0.093	12.5	3.5	1	21	806	826	806	827	0.96

Sequence Information

Coding Sequence: ATGTTGTCTTGTCTGGTGCCTCGCTTTGGACAAGAAGATATGCCATCGTCAACCAAATTCGATTTACAATTTCAACCATTGGCAATTCCAAGGAATGACGACGACTCGTCGCATCAGAGTGAATTTATAAGCTGTCCGCAATGTCAGATGGAGTTTTCTAGTATTCAGTCGCTTAAAGACCACATCATGCAATTACACCAGTCATCCGACTCACCAACCGCGTCGCTGAACGGCATGGCGCAACACTTCTCCCCACCGCCTTCGCTTCTCTCACCTGGAAACTTTCCATACCACCTAAACACAGGTGCACACGAAGGTGGGCGTCAATCGAACAGCCCGAACAGCCAAAATACTCACGCATGCTCTTACAATCAGTGCTCCGCCTCATTCCCAACACTAGAATTATTAGAAAAGCACGAAATGCTTCAACATTCATCAGGTGCCATGAATGTGTGCTGCCGTCTGTGTCACAAGACCTTTGCAAATGTTTACCGGCTTCAACGGCATATGATTTCACATGACGAATCAGCGTtattaagaaaattcaaatgcaCCGATTGtgataaagctttcaagtttaagCATCACTTGAAGGAACATCTACGCATCCACTCAGGTGAAAAGCCTTTCGGCTGCCCCAATTGCGGCAAGCGCTTCTCGCACTCGGGCTCGTATTCCAGTCACATGACCTCAAAGAAATGTATCAGCATGGGATTGAAGATGAATGGCACGAGTCTGGCGACCAacggcaacaacaacaataaccATATGAATggaactaaaaataaatcggAGAAgaaacagcagcaacaacaactctCGATGGCTTCGTCGTTCATGAATCAATCGCACTTGGCGAACGCGGGCAAATTCATGAACGGTGGACTGCCGAACTCCGCGTCGCTGTTTCCGATGCTGCCCAAGTACGAGAATTACGACATGATGAATGCCGCTTTCCTGGCGACGCTGTCCAATCCGTTCTACTCGATGGGTCTGAACCCGAATCTCAATCCATACCACATTCAGAACTTACTGAAACTCACCGGCGTGCACAATCTGAACGCACAAATTGACGACGAGATGCAAAAGACAAACAACGACCACAAAAGCCCACGGTCACATTCCAATCCCGAAGATTTGATAGAAGAGGTTAATGAGAACGACGATTCAAAGCTAGTGATGGACttgaaggaagaagaaaagttttccgagcTCAATGACAACGATTCGGACGACGAACAGATGAATGATAGTGCAGCTGCATCGGTCCATGACTCACGTGACAAATCTAAAACGCCAGACATTAAAGTAGAGCCAACAAGTGTCGATGAGTCGGCAAGTGATTCGCTGCGGTGTCAGCACTGCGATAAGGTCTTCAATCACCCGGCAGAACATCTCCAGCACGAGAAAATGCTGTGCAATGCGTTGATGCTGAAGAAGCACGAAGGAATGATGGCAAACATGGTCGATTCACTGAACAACTCGTCGTCTATGAACGCAGGCAGTGAAGATGATAACGACGACCGTGATTCGAAGATGTCCACCGAGTCGGAGCGAAAGGTTCGAGTGAGAACAGCGATTTCCGAAGAACAGCAAGcaattttgaaggaattttacgCCATCAACTCGAGACCCAACCGTGACGACTTCCGCAATATCGCACAACGTCTCATGCTTGACCCGCGCGTCGTCCAAGTATGGTTCCAGAACAACCGTTCACGTGAGCGCAAGCAAAACGGTTTGTTCAAGACTGGCAGCAGTGGCAGCGAAGAACAGCCACTCGACTTGTCgatgaagaaggaaatgaTGATGGATACACCGACAACGTCTCCGCGCTATGGCATCGTACCATCGCAACATGCTTCCGAAGAAGTTCTCAACTTGAGTCGGAAAATTGCGCCATTCTCGCCGCTTTTCCAGCCCAACTACAGCGCTGACTTCCTTCCACGCCAGATTCCGTCGCCCAACGAAGCCGTGCCTCGAATGTCGAACATTCGCAACGGGTACAACTTGCCGCTAGGGCTTCCGCTCGAACGGCTGCTACAGTTCACACCGGAAATGATAATGATGAAGCCAGAGCAGCGTGGCAACAGCCTGAGTCCCGGAAGCTCAGAGAAACGGTCGTGGAAAGACGACGAAAGCCGCTCATACGACGAAGCATTGAACCATTCGCACATGCAGTACCAAACACAGCGTCGCATGCCTAAAATGAAATCTGAAATTCCACCGGACTCCGATGAGTTCAACTTCGTTTGTGATCTTTGTGACAAGGCCTTCCGCAAGCAGAGTTCTCTGGCACGCCACAAATATGAACATTCAGGTCAACGACCGTTCAAATGCACTGAATGcccgaaagctttcaaacaccGTCATCACCTTACCGAGCACAAGCGCTTGCATTCGGGAGAAAAGCCGTTCCAGTGCGGAAAGTGCTTGAAGCGATTCTCGCACTCCGGCTCGTACTCTCAGCACATGAACCACAGATACAGCTACTGCAAGCCGTACAGAGATTAG
Protein Sequence: MLSCLVPRFGQEDMPSSTKFDLQFQPLAIPRNDDDSSHQSEFISCPQCQMEFSSIQSLKDHIMQLHQSSDSPTASLNGMAQHFSPPPSLLSPGNFPYHLNTGAHEGGRQSNSPNSQNTHACSYNQCSASFPTLELLEKHEMLQHSSGAMNVCCRLCHKTFANVYRLQRHMISHDESALLRKFKCTDCDKAFKFKHHLKEHLRIHSGEKPFGCPNCGKRFSHSGSYSSHMTSKKCISMGLKMNGTSLATNGNNNNNHMNGTKNKSEKKQQQQQLSMASSFMNQSHLANAGKFMNGGLPNSASLFPMLPKYENYDMMNAAFLATLSNPFYSMGLNPNLNPYHIQNLLKLTGVHNLNAQIDDEMQKTNNDHKSPRSHSNPEDLIEEVNENDDSKLVMDLKEEEKFSELNDNDSDDEQMNDSAAASVHDSRDKSKTPDIKVEPTSVDESASDSLRCQHCDKVFNHPAEHLQHEKMLCNALMLKKHEGMMANMVDSLNNSSSMNAGSEDDNDDRDSKMSTESERKVRVRTAISEEQQAILKEFYAINSRPNRDDFRNIAQRLMLDPRVVQVWFQNNRSRERKQNGLFKTGSSGSEEQPLDLSMKKEMMMDTPTTSPRYGIVPSQHASEEVLNLSRKIAPFSPLFQPNYSADFLPRQIPSPNEAVPRMSNIRNGYNLPLGLPLERLLQFTPEMIMMKPEQRGNSLSPGSSEKRSWKDDESRSYDEALNHSHMQYQTQRRMPKMKSEIPPDSDEFNFVCDLCDKAFRKQSSLARHKYEHSGQRPFKCTECPKAFKHRHHLTEHKRLHSGEKPFQCGKCLKRFSHSGSYSQHMNHRYSYCKPYRD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01352532;
90% Identity: iTF_00198987;
80% Identity: iTF_00198987;