Basic Information

Insect: Belgica antarctica
Gene Symbol: -
Assembly: GCA_000775305.1
Location: Belgica.62:122453-126878[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0012 0.051 13.4 3.9 1 23 189 211 189 211 0.97

2 11 0.00044 0.018 14.8 9.7 1 23 217 239 217 239 0.96

3 11 7e-05 0.0029 17.3 7.9 1 23 245 267 245 267 0.99

4 11 0.00094 0.039 13.7 1.6 1 23 273 295 273 295 0.95

5 11 2.6e-05 0.0011 18.6 0.8 1 23 301 323 301 323 0.96

6 11 8.5e-05 0.0035 17.0 0.1 1 23 329 351 329 351 0.95

7 11 0.00022 0.0091 15.7 2.5 1 23 356 378 356 378 0.98

8 11 0.0019 0.079 12.8 0.0 1 23 384 407 384 407 0.94

9 11 0.00032 0.013 15.2 0.1 1 23 511 533 511 533 0.97

10 11 0.017 0.72 9.8 4.1 1 23 669 691 669 691 0.95

11 11 3e-05 0.0013 18.4 2.0 1 23 701 723 701 723 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0012	0.051	13.4	3.9	1	23	189	211	189	211	0.97
2	11	0.00044	0.018	14.8	9.7	1	23	217	239	217	239	0.96
3	11	7e-05	0.0029	17.3	7.9	1	23	245	267	245	267	0.99
4	11	0.00094	0.039	13.7	1.6	1	23	273	295	273	295	0.95
5	11	2.6e-05	0.0011	18.6	0.8	1	23	301	323	301	323	0.96
6	11	8.5e-05	0.0035	17.0	0.1	1	23	329	351	329	351	0.95
7	11	0.00022	0.0091	15.7	2.5	1	23	356	378	356	378	0.98
8	11	0.0019	0.079	12.8	0.0	1	23	384	407	384	407	0.94
9	11	0.00032	0.013	15.2	0.1	1	23	511	533	511	533	0.97
10	11	0.017	0.72	9.8	4.1	1	23	669	691	669	691	0.95
11	11	3e-05	0.0013	18.4	2.0	1	23	701	723	701	723	0.97

Sequence Information

Coding Sequence: ATGCTGAACCGCCGGATGATTCTGGTGAGCAACGACGGTCAAAACACAGGCCAGCACCGAGTCATCACTTCGAGCAACTCAACGACTGGAAATCAAATCATGGACGGAAAGTCACAGACTGTGTACACTACAAGCGACAAGACAACGCACTTCATGAGCCCAATTGGCTCACTCCAGCTTACAGCTGAAGAATGCAATGAAATTCTGATGAAGCGAGCGGTCGCGGCTGTCCAAGCCAACAACCAACACACAATCACTACAACATCGTCGTCCGACGTGCACAATGCTCCCATTTCAATTCAAGtgcagaaagttttgcaaactCTCGAAGACACTGATGACCAACAAGGTCAGCAGCAGCTTCAGCACATGAAAATGGAGCCCAACATGAGCACGTCGCCAAAGTTGGAGacaattgaaattgttgtaAGTGCcgataattttcaatcttcaacGCAACATTACACGACTGAAACCTTGCAGCACTTTGAGACCACCGAAGACACAAAACCAGTCATTCAAAAAAGTCGCAAGAATGATCCCGGCAACAATAAAGAACGTCCATACGCTTGCGAGCAGTGTGGaaagacttttttgttgaagcaTCATCTCACGACTCACGCTCGGTCGCATACAGGTGAACGTCCCCACGTCTGTCCCCATTGCGGAAAAGACTTCTCTCACAAGCACTGTTTGAACACTCATTTGCTGTTGCACACAACCGACCGCCCGTATCAATGTGGCGAGTGCAAGAAGTGCTTTACGCTTAAGCATCACTTGCTGACGCATTTAAGAGTTCATACACGCGACCGCCCGTTCATTTGCCAAGAGTGTGGCCGAGCTTTTCCGTTGAAACGTCACCTAGTGACTCACAGCAAGTTCCACGCTGGAGAGCGCCCGTATATCTGCGAGGATTGCGGTGAAAGCTTCGCTCAGAAGGAGCATCTCGACATGCACTCGCGATTCCACGGATCCGTCAATCCATTCGCTTGCGCAGACTGCGGTGCCACTTTCGCAAGAAAGTTCCAGCTTATCAACCATGGAAAGCTCCACGGACGAGTTCCACATTCGTGCACGGTCTGTGGTCGTGAGTTCTTGCAAAAGAGAACACTGGCAACGCACATGAAAACGCATACAGGTGAAGCTTCATTCCCATGCTTGGCTTGCGGCGAAGGCTTCGCTTCAAAGGCTGAACTGAATGCTCACAATCGATTAGTCCATGGCGGACTTAATCCAAACGCTCCAAACACTACAATCGTAACGAACAAAACCGCAACAGTGATTCATCAGCAACAGTCTCAACAGGCTGCTCAGCAGCAAGCACAACAACAGGCTCAACAGGCAGCGGCTGCCGCTCAACAGCAAGCCCAGCAACAGGCTCAGCAGCAAGctcaacagcaacaacaacagcagcagcagcaacaaatcGAGGTCCAACACATCCAGCAGCAGCCACAAACGGTAACTGTGGTCGGCAATCCCAACAATATGATCGCCACGTTCAGCGGTGAAACTCCACCACGTCTCCAATACGCTTGCCGAGAGTGCGGCAGTGTTTTCAACAGTCGCGAGGGACTCGCTTTGCATTTACGTCTGCACTCAGGTGACAAGAGTCTTATCAACGACCTGTGCGCACTCACCGCCTCCATTCCCGGCCATTTGCTGCAAGGCGTCAATCAAAATTTCTTTTCAGTTAATCTGCCAACTGGCACCACCTTCGTCACCACGCCAGGTGCATCTTCTTCTCCAGTGCCAGTTCAAATTATTACCTCGAACGGAGAAGTCGTCAATCAGATTCTGCAGAGTCCCACTCATGGCAATCAGCAACACCAGCAGATTCAGATCCACCAGCCACAGCAGTCGCAATCTCAGCAGCAGAATCAAATCAAGCAGCAGGTCGTTCAGCAGCCAACTGTTCAGATCACAACGCAAAATCAGCAGCAAACCCAGCAGGTTCAACAAGTTGTACAAATCACTTCGCCACCGCAACAAAAGGCGAAGACGCACTTCTGtcaattttgtggaaaaagtttcgttgcaAAGCACGGTTTAGTTTTGCATAACAAACGTCATCCAGAAGGAAGCTGCACGCTTAGATCGCATGTTTGCCCTGAAtgtggaaaagctttcttgcAGAAGAATCATCTCATTCTTCACCAGCGTCAGCATTTAGAGCAGAACCGAGGCGGCAAGCAAagtcagcagcagcaacagcaagctcaacaacaacagcagcagcagATTGTTGAGCAAGCTCAAGCTCAGCAAAACGGTGATCAGCTCCAACAAGGCCAGTCTCAGCAGATTCAAATCCAACAAGGTCAGGGACAAGGCCAGAACCAACAAATCCAGCTTGCCACTCGCAATGTCCTGATGCCCAACCAACAAGTCCTTCAAGTCCTGCCCGACAACACCACCTGGGTGAAATACGAGATCATACAATCGGATCAGATGGAATAG
Protein Sequence: MLNRRMILVSNDGQNTGQHRVITSSNSTTGNQIMDGKSQTVYTTSDKTTHFMSPIGSLQLTAEECNEILMKRAVAAVQANNQHTITTTSSSDVHNAPISIQVQKVLQTLEDTDDQQGQQQLQHMKMEPNMSTSPKLETIEIVVSADNFQSSTQHYTTETLQHFETTEDTKPVIQKSRKNDPGNNKERPYACEQCGKTFLLKHHLTTHARSHTGERPHVCPHCGKDFSHKHCLNTHLLLHTTDRPYQCGECKKCFTLKHHLLTHLRVHTRDRPFICQECGRAFPLKRHLVTHSKFHAGERPYICEDCGESFAQKEHLDMHSRFHGSVNPFACADCGATFARKFQLINHGKLHGRVPHSCTVCGREFLQKRTLATHMKTHTGEASFPCLACGEGFASKAELNAHNRLVHGGLNPNAPNTTIVTNKTATVIHQQQSQQAAQQQAQQQAQQAAAAAQQQAQQQAQQQAQQQQQQQQQQQIEVQHIQQQPQTVTVVGNPNNMIATFSGETPPRLQYACRECGSVFNSREGLALHLRLHSGDKSLINDLCALTASIPGHLLQGVNQNFFSVNLPTGTTFVTTPGASSSPVPVQIITSNGEVVNQILQSPTHGNQQHQQIQIHQPQQSQSQQQNQIKQQVVQQPTVQITTQNQQQTQQVQQVVQITSPPQQKAKTHFCQFCGKSFVAKHGLVLHNKRHPEGSCTLRSHVCPECGKAFLQKNHLILHQRQHLEQNRGGKQSQQQQQQAQQQQQQQIVEQAQAQQNGDQLQQGQSQQIQIQQGQGQGQNQQIQLATRNVLMPNQQVLQVLPDNTTWVKYEIIQSDQME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00346937;
90% Identity: -
80% Identity: -