Bant003481.1
Basic Information
- Insect
- Belgica antarctica
- Gene Symbol
- ZBTB41
- Assembly
- GCA_000775305.1
- Location
- Belgica.47:3335-8190[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 8.4e-06 0.00035 20.2 1.0 1 23 151 173 151 174 0.95 2 15 0.013 0.55 10.1 1.2 1 19 186 204 186 205 0.96 3 15 0.00074 0.03 14.1 1.3 2 23 215 237 215 237 0.93 4 15 0.00054 0.022 14.5 2.0 1 23 243 265 243 265 0.97 5 15 1.2e-05 0.0005 19.7 1.8 1 23 271 294 271 294 0.98 6 15 0.073 3 7.8 2.0 2 23 300 321 300 321 0.97 7 15 1.1 46 4.1 8.2 1 23 327 351 327 351 0.98 8 15 9.1e-05 0.0038 16.9 3.2 1 23 357 379 357 379 0.95 9 15 4.2e-07 1.7e-05 24.3 2.2 1 23 387 409 387 409 0.99 10 15 4.9e-07 2e-05 24.1 3.1 2 23 416 437 415 437 0.96 11 15 0.43 18 5.4 1.6 1 23 446 471 446 471 0.86 12 15 4.3e-05 0.0018 18.0 4.0 1 23 486 508 486 508 0.98 13 15 0.0006 0.025 14.4 1.2 1 23 518 543 518 543 0.97 14 15 0.0015 0.063 13.1 0.6 1 23 549 573 549 573 0.95 15 15 1.2e-05 0.00048 19.7 0.9 1 23 579 601 579 601 0.99
Sequence Information
- Coding Sequence
- atGGAAATATTGCTGCGATCGAAAATATTGAATAACGAGTGCTGTCGGCTGTGCCTTAGCGAGAAATTTGAAGACTTGAGAAAGCTGGATGGAATTGTTGAATCCGGTCTTACAGCGAGAGGTCTAGTTGAGAAATTCAATGTAGTGGCGcTCAGCAGCTCTGTAGAGTTAATCACCATTTGCAGTGCTTGCATCTCAACCCTAGAAAGTTTTTACAAGTTCCACTTGGTCGCACAATCATCACGGTCTGAgattcttgaaattcttcagcAAGAACTGAAGCCACCAACTGACGAGATACCAAAGACTGAACTTGCAGAAGCAGGAACCATCGAAGtacaaaatgaagttttgatcGAGTTTTTGAACATTGATGGTGATGTTGAGAGCGACAACGAAGCAGACTTTCAAGATGATGCACCTAGTGACTTCCAGGCTGAAGAATCATCTTTCGAATGCGACATTTGCCCTAGAATTTACAAACGAAAAACTCTCCTCGCTCGCCATTTAGCACGTCATCATCTTGACGGACTCTACAAACCACCAACAAGACTTTTCAATTGTGATTTGTGTGGCGAAAAGTTCACCGAGCGTGATGAACTGGACAATCACTGCCTGTCGGTGACTTGCATCACATCACCAGAGTGTAGATTTTGCAACGAAGTCTTCTCTCACTTGACAGAACTGAAAACTCACATAGAACTCAATCACATTAAAAGTCGCCAGCATTCCTGCCCGAtctgcttcaaactttttccaagCTCATCGAATCGAAACTCACATTTGCAATCTCACAACGCTGAGAACACATTCAAATGCACTGACTGCGACCAAggtttcaaaagcttgttgtACTTAAAAAAGCACCAAAAGTCGATTCACACGACTGCCGTCAATACCTGCCAAGTATGCGATCGCACCTTCCTTACCCAGCAGAGGTTTGACTATCACATGAAATCCCACGACGCCGTCAAGCGATACAAATGCAGTCACGAGGGTTgtcttaaaagcttcttgcaGCATCACCACCTCGAAAATCATAAAGCAACGCATTCAGgcattaagaaatttctttgcttCGTGTGTGGACGGAATTTCAGGCAAGACTGCAATCTGAAAGCACATCTGAAAACTCATTCCACAGGTgacgaaaagaatttcaaatgcaaagaCTGTGAAAAGTCgttcaaattgctttcatcGCTTCGCAGTCATATGAAAATCCACGACGCCAAGTCGCAGTGCCAGTGTCCTGAGTGTGGCAGAAGCTTTTCACAACGAAGTTTGCTGAGATCCCACTTTCAGACACACTTCAGAGATCCATGCGCTAAGCCATTCAAATGCAGTCAAGTAGGAtgcgaaaaaagctttttccaagAACGTTCCATTCACTACCACAACAGCGTCGCTCATGAAATCGGCGAACCGACCacaaagaaaagctcaaaaatcgTCTTTCATTGCGAGCAATGCAGCAGAACCTTCACGCTTAAAAGCTTATTGAAGCGACACGTTCTGACTCACACTGAAACCGAGCAGAAAATTCGAAAGTACAAATGCGAACATTCCGACTGTGAAGCTATCTTTAAGAGGGCTGAACACTTGAATGGACATTTAAACTCCGTGCATCTAAAAATAAGACCACACAAGTGTGCATATCCTGGCTGCGAAAAATCATTCACTCAAGTCGGAGACAAGAACATTCATATGAAGATTCATAGCAACGACAAGCCATACGTTTGTATGGTCTGCCAGAAGTCTTTTCGCCTCAAAAAAGGATTACGAGCGCATGAGAGGACTCATGCGAACAAGAAAAGCTACGAAACAGAGCGTGAAATGTCGAAGAACTTAAAAGAAGTTGACTGTGATGGAACGGAAACAAGTGCTAGAGTGATGGAAGGATGTGACTTGAAATATGCGGGAATTTTCAATGCCACTGGATAA
- Protein Sequence
- MEILLRSKILNNECCRLCLSEKFEDLRKLDGIVESGLTARGLVEKFNVVALSSSVELITICSACISTLESFYKFHLVAQSSRSEILEILQQELKPPTDEIPKTELAEAGTIEVQNEVLIEFLNIDGDVESDNEADFQDDAPSDFQAEESSFECDICPRIYKRKTLLARHLARHHLDGLYKPPTRLFNCDLCGEKFTERDELDNHCLSVTCITSPECRFCNEVFSHLTELKTHIELNHIKSRQHSCPICFKLFPSSSNRNSHLQSHNAENTFKCTDCDQGFKSLLYLKKHQKSIHTTAVNTCQVCDRTFLTQQRFDYHMKSHDAVKRYKCSHEGCLKSFLQHHHLENHKATHSGIKKFLCFVCGRNFRQDCNLKAHLKTHSTGDEKNFKCKDCEKSFKLLSSLRSHMKIHDAKSQCQCPECGRSFSQRSLLRSHFQTHFRDPCAKPFKCSQVGCEKSFFQERSIHYHNSVAHEIGEPTTKKSSKIVFHCEQCSRTFTLKSLLKRHVLTHTETEQKIRKYKCEHSDCEAIFKRAEHLNGHLNSVHLKIRPHKCAYPGCEKSFTQVGDKNIHMKIHSNDKPYVCMVCQKSFRLKKGLRAHERTHANKKSYETEREMSKNLKEVDCDGTETSARVMEGCDLKYAGIFNATG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -