Basic Information

Insect: Belgica antarctica
Gene Symbol: -
Assembly: GCA_000775305.1
Location: Belgica.185:23379-26672[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 6.2e-05 0.0026 17.5 0.3 1 23 228 250 228 250 0.98

2 14 4.8e-05 0.002 17.8 2.0 2 23 257 278 256 278 0.96

3 14 0.00039 0.016 15.0 0.2 2 23 283 305 282 305 0.94

4 14 4.9e-05 0.002 17.8 1.3 3 23 332 352 331 352 0.97

5 14 0.0004 0.017 14.9 1.3 1 23 446 469 446 469 0.92

6 14 0.011 0.45 10.4 1.5 3 21 480 498 478 499 0.89

7 14 0.18 7.5 6.6 1.0 2 23 509 531 508 531 0.92

8 14 3.6e-08 1.5e-06 27.6 2.6 1 23 540 562 540 562 0.99

9 14 2.7e-08 1.1e-06 28.0 1.4 1 23 569 591 569 591 0.98

10 14 1.7e-06 6.9e-05 22.4 1.2 3 23 603 623 601 623 0.92

11 14 5.9e-05 0.0024 17.5 2.8 1 23 629 651 629 651 0.99

12 14 8.8e-07 3.6e-05 23.3 2.2 3 23 659 679 657 679 0.97

13 14 3.4e-07 1.4e-05 24.6 1.3 1 23 685 707 685 707 0.99

14 14 0.0067 0.27 11.1 0.1 1 23 713 737 713 737 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	6.2e-05	0.0026	17.5	0.3	1	23	228	250	228	250	0.98
2	14	4.8e-05	0.002	17.8	2.0	2	23	257	278	256	278	0.96
3	14	0.00039	0.016	15.0	0.2	2	23	283	305	282	305	0.94
4	14	4.9e-05	0.002	17.8	1.3	3	23	332	352	331	352	0.97
5	14	0.0004	0.017	14.9	1.3	1	23	446	469	446	469	0.92
6	14	0.011	0.45	10.4	1.5	3	21	480	498	478	499	0.89
7	14	0.18	7.5	6.6	1.0	2	23	509	531	508	531	0.92
8	14	3.6e-08	1.5e-06	27.6	2.6	1	23	540	562	540	562	0.99
9	14	2.7e-08	1.1e-06	28.0	1.4	1	23	569	591	569	591	0.98
10	14	1.7e-06	6.9e-05	22.4	1.2	3	23	603	623	601	623	0.92
11	14	5.9e-05	0.0024	17.5	2.8	1	23	629	651	629	651	0.99
12	14	8.8e-07	3.6e-05	23.3	2.2	3	23	659	679	657	679	0.97
13	14	3.4e-07	1.4e-05	24.6	1.3	1	23	685	707	685	707	0.99
14	14	0.0067	0.27	11.1	0.1	1	23	713	737	713	737	0.93

Sequence Information

Coding Sequence: ATGGAAGAAATATCGGACGTGAAACGCGACCAAACGCAAGACAAAGGCGTCTTCAATATCGGGAAGATGTGCAGGACGTGTCTCGCGGAGACGGAGGACGAAATGCACGAAATCTTCCTCGGTTCGCAGCAAGAACCTGATGCATTAACAATAAATCAGATTTTAGTGCAATTATCGGTCAATGTTCAGATATCGCGCAACGACGGCCTACCAGACAAAGTGTGCAAAGATTGCGCAgaaaaagcttatttatttCTGCAGTTCAAGTCGACAATCGAAGAAAGTGATGCAACGCTCCGTGCAGTTCTGTTCAAAAGTCCGACGAGCATCAAGAAGGACGCCGTGTTCGACGAGAACCACACGAACTTCATGATGGGAATCAAAACGGAAATTGCATTTGTTGATGCTGATCCTTTCATCGATGACGACGGAGATTTCGATGCTTCCATCGACTACGCCAACAATTCAAACGCATCGAATCAACAGTGCGACTCCTACAACAACAATTCCTACTCGCAGGACATCCCAGAAGATGACGAGAGTGGCGATGGCGAAGGCGACTCAGAAGACGATGAGAGCGACGAAGACTTTGAGATGAAACCTCCTAAGGACAAGAAATCACAACAGCTTCCGACTCGGATGGTCGAAAACGTCGACTACACTAAGGACGAAGAGGGGAAATTCGTTTGCCAGATTTGCAATAAGAAACTTGTGGACAAGAAAGGATTAAACCTCCATATAAGACTTCATACTGGCGAGAACCTCAAGCGATGCAATATTTGTAATCGGGGCTTCATCAAAAGCGACCACCTTCGACGACACGAACTGATACACGAGCGATCTGTCAGCTGCGAATTTTGTGAAGAGACATTCGTCACTCGAAATGACTTGAAAGTGCATCTTAAAGACGAGCATGACGAAGACTTAGGTCAAGACATCGAAAAACCGCAGAGAAGTCAGCCTAGACCGAGACCGACGAGTCTCATAGCGATGTGCAAGATTTGCGATAAGAAATTTCAGAGAATTTCAACGCTACGTGCTCATCTGCAACAGCATCTAATGACAACATCCTTCGACGAGATCGACATCAAGaacaagattttccttttcaatccACTCGAGGTGGATCTCGAAAAGGCTGCCAACCCTGAACTGCATCAGTATTTACGCAACAAGCTAAACGAGCACGAATGCGACAAGTTTTACCAAATTGTGACCCGCGACGGCTACGAAATGCTTCTTAGCGACTCCGAAACCGAAGATGAAAGCGAAGCTGGCCCAACAGACGACCGAATAGAGCTTGGACTCGAAGAAGAATCGATTTCGAAGAACGTCTACACTTGTAGTCAATGTCCAAAGACTTTCAAGCGGAGCCGAGATTCACAAACCCACATGGTCCTAGAGCACTTCCATGACCTTCCGAGCTTCGTCGACAAATGCATCACTTGCAACAAGTCTTTCCCAAACACTTACACGCTTCACAAGCATCTGAAATCGCAGTGCGAGAACAAAACCAAGAAGCTGACCTGCAACGTCTGcagcaagaaatttatgtGGCTGGACTCGATGGCCAAACATATGGAACACGAACATCCCGGCACCGAGAAGATCAAAATGTATACTTGTGAGCTATGCGGAAAGGCCTTTTCGAGATCAGAACACCTGGAACGTCATCGCAAGACCCACAACCCTTCAGAAAAGAAGTTCGAGTGTCCGGTGTgccagaaaaagtttaatcgaaAAGACAATTTGCGTTCTCATATGAAGATCCACAAAGACAACCGCGACGACGAAGACAAGCACTTGTGTATTTACTGCGGGAGAGCCTTCAGCAACTCGAGCAATTTGATCGTTCACATGCGTAGGCACACGGGCGAAAAGCCTTACAAATGCGATCTCTGCGAGAAAGGCTTTCCTCGCTCAAGCGACCTTCAGTGCCATCGACGCACTCATACCGGCGAAAAACCGTGTTTGTGCACAATTTGCGGAAAAGGATTCTCGAGAAGCAACAAATTGGTGCGACACATGAGAATTCATACAGGCGTTCGGCCATATCAATGTACCTATTGCGAACGCGCTTTTACACAGTCGAACGACTTGACTTTGCATATCCGCCGCCATACGGGCGAAAAGCCTTACGTCTGTGCAGTATGCGGCGATCGCTTTATACAAGGAACTGCGTTGAAGCAGCACCAAAGGATGCAAGGACATTTCGAGGGCAGTCAACCGAGTCCCTACTCGAGCATAAGCGTCAACAATCCAAGCCGCTACACGAACTCGAACCTTGTCAATCGAAGATACAACCCGGATCAGCCACAACAGCAAGGAAGTAACTCTGGTAACCAGCAGTTGCCCATCAAGCCAGTGATACCGCGGCGTAGAACGGCCAACAACTCCGGTCAGAACATGAATCAAATGATTGCCTCGCAGCAGATGATGGCGTCGACTTCTCAGAACATGAACCAAGTCGCGATGAACCACGAGACTGGCTCGTCGGACGTCATGAACATGAGATCGCCATCGCCGCATCACTCGTCAGCCACACACACGCCTGTGACGACGCCGATCCCCAACAACCTGTCGCAAATTGACATCAAGCCAAATATCCAGAACTTGCAGTACAACGGACTGGTCAACATGCCCGGCAATATGGAAATCGCGACgcttttcttcaatcaaaacttcaatcagCAGAACCACCAGAACAATTAA
Protein Sequence: MEEISDVKRDQTQDKGVFNIGKMCRTCLAETEDEMHEIFLGSQQEPDALTINQILVQLSVNVQISRNDGLPDKVCKDCAEKAYLFLQFKSTIEESDATLRAVLFKSPTSIKKDAVFDENHTNFMMGIKTEIAFVDADPFIDDDGDFDASIDYANNSNASNQQCDSYNNNSYSQDIPEDDESGDGEGDSEDDESDEDFEMKPPKDKKSQQLPTRMVENVDYTKDEEGKFVCQICNKKLVDKKGLNLHIRLHTGENLKRCNICNRGFIKSDHLRRHELIHERSVSCEFCEETFVTRNDLKVHLKDEHDEDLGQDIEKPQRSQPRPRPTSLIAMCKICDKKFQRISTLRAHLQQHLMTTSFDEIDIKNKIFLFNPLEVDLEKAANPELHQYLRNKLNEHECDKFYQIVTRDGYEMLLSDSETEDESEAGPTDDRIELGLEEESISKNVYTCSQCPKTFKRSRDSQTHMVLEHFHDLPSFVDKCITCNKSFPNTYTLHKHLKSQCENKTKKLTCNVCSKKFMWLDSMAKHMEHEHPGTEKIKMYTCELCGKAFSRSEHLERHRKTHNPSEKKFECPVCQKKFNRKDNLRSHMKIHKDNRDDEDKHLCIYCGRAFSNSSNLIVHMRRHTGEKPYKCDLCEKGFPRSSDLQCHRRTHTGEKPCLCTICGKGFSRSNKLVRHMRIHTGVRPYQCTYCERAFTQSNDLTLHIRRHTGEKPYVCAVCGDRFIQGTALKQHQRMQGHFEGSQPSPYSSISVNNPSRYTNSNLVNRRYNPDQPQQQGSNSGNQQLPIKPVIPRRRTANNSGQNMNQMIASQQMMASTSQNMNQVAMNHETGSSDVMNMRSPSPHHSSATHTPVTTPIPNNLSQIDIKPNIQNLQYNGLVNMPGNMEIATLFFNQNFNQQNHQNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00199238;
90% Identity: iTF_00199238;
80% Identity: iTF_00199238;