Basic Information

Insect: Belgica antarctica
Gene Symbol: -
Assembly: GCA_000775305.1
Location: Belgica.592:23095-27127[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 32 0.2 8 6.5 0.1 2 23 20 40 19 40 0.89

2 32 0.00046 0.019 14.7 2.9 2 23 47 68 47 68 0.96

3 32 4e-05 0.0017 18.1 0.5 3 23 76 96 75 96 0.99

4 32 3.4e-05 0.0014 18.3 1.3 1 23 103 125 103 125 0.99

5 32 0.048 2 8.4 0.4 2 23 132 151 131 151 0.92

6 32 0.00031 0.013 15.3 1.8 1 23 157 180 157 180 0.96

7 32 0.00046 0.019 14.7 0.2 2 23 187 208 186 208 0.96

8 32 0.0079 0.32 10.8 0.2 2 23 243 265 242 265 0.93

9 32 8.3e-05 0.0034 17.1 0.5 3 23 273 294 272 294 0.97

10 32 0.0011 0.044 13.6 1.2 1 20 317 336 317 338 0.93

11 32 0.29 12 5.9 0.7 1 23 503 526 503 526 0.81

12 32 0.032 1.3 8.9 2.6 2 23 532 556 531 556 0.95

13 32 0.26 10 6.1 1.0 1 23 595 618 595 618 0.91

14 32 3.2 1.3e+02 2.6 0.4 3 23 629 652 628 652 0.89

15 32 6.7e-05 0.0028 17.4 0.5 1 23 657 680 657 680 0.94

16 32 1.6 64 3.6 1.1 3 23 688 711 686 711 0.89

17 32 0.054 2.2 8.2 0.5 2 23 720 742 720 742 0.93

18 32 1.2e-05 0.00048 19.7 1.7 1 23 747 770 747 770 0.96

19 32 0.0001 0.0042 16.8 1.1 1 23 776 799 776 799 0.94

20 32 0.034 1.4 8.8 2.4 2 23 808 832 808 832 0.95

21 32 5.6e-05 0.0023 17.6 0.4 1 23 838 861 838 861 0.95

22 32 6.5e-05 0.0027 17.4 0.6 1 23 867 892 867 892 0.96

23 32 7.4 3e+02 1.5 2.9 2 14 907 919 906 929 0.81

24 32 0.33 14 5.7 1.6 3 23 941 962 939 962 0.90

25 32 2.9 1.2e+02 2.8 0.2 2 23 971 992 971 992 0.95

26 32 3.5 1.4e+02 2.5 0.0 1 23 996 1018 996 1018 0.90

27 32 0.00017 0.0069 16.1 1.1 1 23 1028 1050 1028 1050 0.98

28 32 0.0043 0.18 11.7 1.8 1 23 1056 1078 1056 1078 0.98

29 32 0.0052 0.21 11.4 1.4 1 23 1084 1106 1084 1106 0.98

30 32 1.2e-06 4.8e-05 22.9 0.4 1 23 1112 1134 1112 1134 0.98

31 32 0.41 17 5.4 0.1 1 23 1139 1162 1139 1162 0.89

32 32 0.021 0.86 9.5 3.0 1 21 1168 1188 1168 1189 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	32	0.2	8	6.5	0.1	2	23	20	40	19	40	0.89
2	32	0.00046	0.019	14.7	2.9	2	23	47	68	47	68	0.96
3	32	4e-05	0.0017	18.1	0.5	3	23	76	96	75	96	0.99
4	32	3.4e-05	0.0014	18.3	1.3	1	23	103	125	103	125	0.99
5	32	0.048	2	8.4	0.4	2	23	132	151	131	151	0.92
6	32	0.00031	0.013	15.3	1.8	1	23	157	180	157	180	0.96
7	32	0.00046	0.019	14.7	0.2	2	23	187	208	186	208	0.96
8	32	0.0079	0.32	10.8	0.2	2	23	243	265	242	265	0.93
9	32	8.3e-05	0.0034	17.1	0.5	3	23	273	294	272	294	0.97
10	32	0.0011	0.044	13.6	1.2	1	20	317	336	317	338	0.93
11	32	0.29	12	5.9	0.7	1	23	503	526	503	526	0.81
12	32	0.032	1.3	8.9	2.6	2	23	532	556	531	556	0.95
13	32	0.26	10	6.1	1.0	1	23	595	618	595	618	0.91
14	32	3.2	1.3e+02	2.6	0.4	3	23	629	652	628	652	0.89
15	32	6.7e-05	0.0028	17.4	0.5	1	23	657	680	657	680	0.94
16	32	1.6	64	3.6	1.1	3	23	688	711	686	711	0.89
17	32	0.054	2.2	8.2	0.5	2	23	720	742	720	742	0.93
18	32	1.2e-05	0.00048	19.7	1.7	1	23	747	770	747	770	0.96
19	32	0.0001	0.0042	16.8	1.1	1	23	776	799	776	799	0.94
20	32	0.034	1.4	8.8	2.4	2	23	808	832	808	832	0.95
21	32	5.6e-05	0.0023	17.6	0.4	1	23	838	861	838	861	0.95
22	32	6.5e-05	0.0027	17.4	0.6	1	23	867	892	867	892	0.96
23	32	7.4	3e+02	1.5	2.9	2	14	907	919	906	929	0.81
24	32	0.33	14	5.7	1.6	3	23	941	962	939	962	0.90
25	32	2.9	1.2e+02	2.8	0.2	2	23	971	992	971	992	0.95
26	32	3.5	1.4e+02	2.5	0.0	1	23	996	1018	996	1018	0.90
27	32	0.00017	0.0069	16.1	1.1	1	23	1028	1050	1028	1050	0.98
28	32	0.0043	0.18	11.7	1.8	1	23	1056	1078	1056	1078	0.98
29	32	0.0052	0.21	11.4	1.4	1	23	1084	1106	1084	1106	0.98
30	32	1.2e-06	4.8e-05	22.9	0.4	1	23	1112	1134	1112	1134	0.98
31	32	0.41	17	5.4	0.1	1	23	1139	1162	1139	1162	0.89
32	32	0.021	0.86	9.5	3.0	1	21	1168	1188	1168	1189	0.93

Sequence Information

Coding Sequence: ATGTTCGAAAACCCGGCGAACGTCCTTCTTGATGACTCGCAAGCCACTGTTTTGATAGTTTGTGAAGTTTGCGGGCAATCGGTGGCGAGACAGGACTACGATCGGCATCTCAGAACTCACAAGGAGAAACGCGTCGAGACCTGCAGCATTTGCTTCAAATCCTTTACAAaCATCAGCAATTTCAAATATCACATTGCGCATCATGGCACTGAACGACCATGGCTGTGCAACGAGTGCCCCAAAAACTACAAAACAAAGATTGACCTGCTCCAGCACCAGCGTGTTCATGACAAAGCTCGAGATCCTTTCCAATGCAGTGTCTGTGAGGCATTCTTCCTGACGCGAAGCAATCTGAACACTCATATGAGAACTCACAGCCTTAAAGGCCCGCAAAAATGCGAGAGCTGTGACAAAGTATTCGTTAATCTACGCTCACACATCCAAATGGTCCACCAGAAAGTTCGTCGACACGCTTGTCACCGttgcgaaaaagttttcggcaaGAAATCCGGCCTCGACCGACATATAATCACTGTCCACGAAAAGAAGCGGTGCTGGTCTTGTGATATctgtgaaaaatcttttggcGAGAAGGCTCAAGTTATGCGTCATAGAAAAATTCACCTCAAGCCAATAGTTCGACAGTATGAATACATCGAACCGCTGGAACCTCCGGGTGAAGACGAGGTTGTGGAGGGCGAGTGCAAGAACAACAAGCAGCGAATGAAGTGCGGAATTTGCAAACGGATTGTCAACTCAAGAGCGGCTTTAAAGCGACACAAGCTGCTGATTCACGAGGGACAAAAGAACATGCTTTGTGACTTCTGTCCAAGAATGTTTGGCGAGAGGTCGAATTTGAAACGACATATCATGAAAGTTCACGGCTCCGAAATCGATTTCGATCCAGTCGACACCGAAGTTGACgttaaatttgaacttaacCCGATACATTCTTGCAAAACTTGCGACCGAACGTTGACAACCAAACGGAGTTTGGAAACACATCAAGCGAGCTGTCGAATCAACcagcagaaaaagttgaacaaactcATGGACTCTGACGAGGCAGGCGAAGAATACGTAAACCAAGAAATGCCAGAAGAACGACTTGATTCAGATGAAGACGCTAACGACATGGGCGACGTTGAACAAATCTTCTTGTCGCCTGTGACTGAAAACATCGATATTAAAGTCGAACCAGATGAAGATGACTACCTGGATGACTCAAAAAGCGGCAGCGAAGCTGTGAACACCTTGATTGAAGTCACGATCAAGGAAGAACCGATCGacgatcaaatggaaattgagGAAGAACCGGCAAGCGTGAAACGAGTGTCAACAGCGAGACTAGTAGCCACAGCCAAAATCAAGAggcacgaagaagaaattctgctGTTTGATTCTCAAATCGAAGCTTTATCGcccaaaagcaaacaaaaagattccAAAGCAGCTCAACAACGGTTGCGATCTGAAGACTTCTTAGATCCCAATTCGTTGCCAAGTTACAAGTGCATAATCTGCCCGAAGACTTTCAAGCAGCTTCGCTATGTGATTCCGCACTTCAAGTCGGTTCATACAGACATGCGGATGAAGTGCAAGGTCGAGGGGTGTGAAGAAACCTTCATCCACAGAACACAGCGAATGCGTCACCAGCAAAAACAACATCCAGAAACCTACGAAGAGTCTGACGAAGGCAACTCGGACCTGGATTTTGAGCCGATCATCGAAGAATATTTGGAAGACGACGACGGCCAGGCTGACACCAAGCCAGAAATCAAGTACGAGTGCATGTTGTGTTCATGTGAGTTTGACACTCAAGATGCACTGGACGATCACTTCGAAAACACGCACGACGAAAACGACGCGGAAGATGAACAGTTGTGCTTCACCTGCGATCCACCAAAAAAGCTAAAGAACAACCGAGCTTTGTATCGACACACCAAAGCAGTGCATTCTGGAGTGATCTTCAAGTGCCCGGAATGCGAACGGCAGTTCTCGTTCAAGCGATCGTTGGATCGCCACATCGAAGGTGTCCATAAGGACACCCGAGACTTTCTGTGCGATTTCGAAGGCTGTGAAAAAAGATATCGGTGCTTGTACGATCTCAAAGAGCATTTAATCAATGTGCATGATCTTGGCGACAAAACTGATAGGACTTGTACAATCTGCAAAAGCGTGTTTAAGAAAGTCAGATATCTTGATACGCACATGATCGCCATGCACTCggacaaaactttcaagtgcGACCAATGTGATCGACGCTTCTCCTTTGAACGATCATTGAAACGTCACATCAAAGGCGTGCACGAAGACGTGAAAGATCACGAGTGCGCTACCTGCCCAAAGAAATTCCGCACGGCTTACGATCTCAGAGAGCACAGGATCAATGAACACAACATCGGTGAAAAGTCCGACCGGACTTGCACAGAGTGCCAGCCGAACAAAGTcttcaagaaggaaaagtaTTTACAAATGCACATGTGCAGTATTCACAACGACGCGCCGATGTTCAATTGCCCAATCTGCAATCGAGGATTCTCCTTTCAAAGATCGATGGAGCGACACGTCCGAGGCGTTCACGAGAACCGCCGCGATTTCAAGTGCGAGACTGATGGATGCAGCAAGTCCTTCCGGTCGCGCTACGAGCTCAACGAACACGTCAACAACATTCACACCGACGAATCGGAGAAAAAGAAGTCTTCGTTGGACAAAATCACTTGCGATGTTTGCGAAAAAGTCTGTAAGACGCCAAAGATTCTTTATTGCCATAAGAAAATCGTCCACGAGGGCAAGAAGTGGGGCACCGGCAAAGTTCACTGCAAGCTGTGCAAGGAACAATTTGACTCCAAGTACTGGAAGAACAAGCACTGGGCGCAAGTCCATCGCAACGGAGAAGTCGTCAACAGAGTCTGCCGGCTTTGTGATAGCGAATTCCAGCTTTTCGCCGATTTTAAAGACCACATTGAGTCACATCTTGGCCATTTCATCTGCATGATTTGTGGAGCAGACTTTCTCGATGAAATTTCGCTTGCAACTCACGGTGAGAGCCACCGAAGATACGAAGATGAGTTCCGGCCGTTCATCTGCGATGTTTGTTCGCACCGGCTGACCACAAAAGCGCAGCTGGCAATTCACATGCGGAAACATGTCGACGGTCATCATTACATTTGTGACGTCTGCGGAAAAACTTACAAGTTCATCGCGCCGTTCCTGCATCACAAGAAAACACATCTCAACAGATACGATTTCCAATGCAGTTTCtgcgaaaaaagctttatcatGAATCGCGATCGAACGCTGCACGAGCGAGTCCATACTAAAGAGCGGCCTTATTCATGCGACCAATGCGGACGCGCATTTTCATACAAAGCTGCACTCAACAAACACGCAAAAACACACGACGTCAATGCTTTCATGTGCAAAATCTGCGGTCTGCAAAACTCGACTGCACCCGCATTGAGACAGCACGAAGAATTAGAACACCCTGAACTATTGCCGTTTTCATGTTGTTACTGTcgtaaaagcttcaaagttgattACTCGCTTGAAGCACACAAACTGAAGTGTTCAGAAGACATGGAATTTGGAAGCCTGGATCGTACACTGAACTAG
Protein Sequence: MFENPANVLLDDSQATVLIVCEVCGQSVARQDYDRHLRTHKEKRVETCSICFKSFTNISNFKYHIAHHGTERPWLCNECPKNYKTKIDLLQHQRVHDKARDPFQCSVCEAFFLTRSNLNTHMRTHSLKGPQKCESCDKVFVNLRSHIQMVHQKVRRHACHRCEKVFGKKSGLDRHIITVHEKKRCWSCDICEKSFGEKAQVMRHRKIHLKPIVRQYEYIEPLEPPGEDEVVEGECKNNKQRMKCGICKRIVNSRAALKRHKLLIHEGQKNMLCDFCPRMFGERSNLKRHIMKVHGSEIDFDPVDTEVDVKFELNPIHSCKTCDRTLTTKRSLETHQASCRINQQKKLNKLMDSDEAGEEYVNQEMPEERLDSDEDANDMGDVEQIFLSPVTENIDIKVEPDEDDYLDDSKSGSEAVNTLIEVTIKEEPIDDQMEIEEEPASVKRVSTARLVATAKIKRHEEEILLFDSQIEALSPKSKQKDSKAAQQRLRSEDFLDPNSLPSYKCIICPKTFKQLRYVIPHFKSVHTDMRMKCKVEGCEETFIHRTQRMRHQQKQHPETYEESDEGNSDLDFEPIIEEYLEDDDGQADTKPEIKYECMLCSCEFDTQDALDDHFENTHDENDAEDEQLCFTCDPPKKLKNNRALYRHTKAVHSGVIFKCPECERQFSFKRSLDRHIEGVHKDTRDFLCDFEGCEKRYRCLYDLKEHLINVHDLGDKTDRTCTICKSVFKKVRYLDTHMIAMHSDKTFKCDQCDRRFSFERSLKRHIKGVHEDVKDHECATCPKKFRTAYDLREHRINEHNIGEKSDRTCTECQPNKVFKKEKYLQMHMCSIHNDAPMFNCPICNRGFSFQRSMERHVRGVHENRRDFKCETDGCSKSFRSRYELNEHVNNIHTDESEKKKSSLDKITCDVCEKVCKTPKILYCHKKIVHEGKKWGTGKVHCKLCKEQFDSKYWKNKHWAQVHRNGEVVNRVCRLCDSEFQLFADFKDHIESHLGHFICMICGADFLDEISLATHGESHRRYEDEFRPFICDVCSHRLTTKAQLAIHMRKHVDGHHYICDVCGKTYKFIAPFLHHKKTHLNRYDFQCSFCEKSFIMNRDRTLHERVHTKERPYSCDQCGRAFSYKAALNKHAKTHDVNAFMCKICGLQNSTAPALRQHEELEHPELLPFSCCYCRKSFKVDYSLEAHKLKCSEDMEFGSLDRTLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -