Bant003072.1
Basic Information
- Insect
- Belgica antarctica
- Gene Symbol
- -
- Assembly
- GCA_000775305.1
- Location
- Belgica.32:127416-131098[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.9e-07 0.00017 20.5 0.0 1 34 183 216 183 223 0.93 2 4 4e-11 3.6e-08 32.3 0.0 1 41 396 436 396 439 0.91 3 4 3.4e-06 0.0031 16.5 0.0 1 39 697 735 697 739 0.85 4 4 1.9e-06 0.0017 17.3 0.0 3 40 988 1025 986 1029 0.88
Sequence Information
- Coding Sequence
- ATGAGTAAAGAACTGCTGAACCACAAGACAAAGTGTAGGCTGTGCTTCAGGCGAGTCAGTTTGAATCGAAGTTCTGTTAAAGTCGACGAGAAAatccagaaaaagtttcacagcCTTACGAGCATCGAGCTTCGGCTCTCAGAAACATTCTCAAGCCGGGTCTGCAAGCCATGCTGCGAACAATTGAGCTCAACGGTGTCTTTCCAGCAGAAGATGATCGAAAATCAGCAGAAACTTTACCTGCACGAGAACGAAACTTGCTTGCCCAACGTAGAATTTGTTTACGTCAAAGAAGAACAGGAAAGAACGAGCAATGtactgaaaattgaaaacgttttctcatTGAAAGTTAAGTGTGATGGATCAGGGATAAACAACAGCTGGATCACAGACCTTCCCGGCCAAGACGAGTCAAACGATATCACTGTTGATAAAGAATTAGAGAGTCTGGGACCAATAAACGATGATCAAACGGTCAGTTTCAACTCAGAAAAAACCCCAACAAACGATAAAGTTGTGACAAGAAAAGAACTTCCTCGAAGCTACACAGAGGAAGAGCTTAATCAAGCAATTCAGGTGGTCAAAAGCGGTGCAATGACATGTTATAAAgcatcaaaaatcttcaaagtccCCTCACTAACACTCGCTTGCAGAATATCAGCGAGCGTGCTCAAGCAACAAGAAGAGCTGCAGTTGAAGGAGTTCGTTCTCCGCACTGTTAAGGAAGGTAAAATATGCAAGACCAGCGATTTGATCGACGAAGCGATGAAGATCATCAAGGGTCGTGAAAATAAGAAAGAGCGCAACGTCAGAACATTGACACCAGGCTGGGTCAGCAGGTTCTACGGACGTCATCCAGACATTGCAGACTTCAAGAAACTCGAATGCGACCAGTGCGATTACAAAACGCAATCGGACAGCGAGATGGTCCTTCATATGACAATTCACGATCATGGATCTACCGGCGAAGCTACTTCGACAAGTCTCCAAGATCAGCCAGagcaaaattgtgaaatgaaattcactGATAATGAAAGTGACAAAGAAGATCCTGACGACAACTTTTCAGATAACAGAGCAGTTGAAGACACAATTCTCAGCCCGCAACCAACAAATGACGAAACTGCAAGTTCTGACCCAGCAATCCATAAAGTCGttacaagaaaaagaattccTCGAACCTACACGAAGGAAGACCTTGATTTAGCGATTCAGGCAGTCAAAAGCGGTGCAATGACGAATAACAAAGCTGCACGCACTTTCAAAATTCCTCGAGAAACTCTAGCGTGCAGAACTTCGGGAAAATACCTTAGCGGTCACATCGGTCGCACGAACATACTCAAGCAACAAGAAGAGCTGCAGTTGAAAGAGTTCGTGCTTCGCACTGTTAAGGAAGGTAAAATTTGCAAGTCCAGAGATTTGATCGACGAAGCGATGAAGATAATCAAGAATCGAGAAACAAAGAAAGACCGAAACGTCAGAACATTAACATCAGGCTGGGTCACTAGTTTTTACGGGCGTCACCCAGAAATTGAAGCCTTCAGGAAACCCAAGAAACTCGAATGCGACCAGTGCGAGTACAAAACGCAATTCGAAAGCGAAATGGTCCTGCATATGACTATTCACAATCGAGTGTCGACAGGCGAAGCTGCTTCGACAAGTCTGCAAGATCAGCTGGATCAGAATTGTGAAATGAACTTTAGTGAGATTGAAAGTGACGAAGAAGACTTTGATGACAACAGTTCAGACTTCGctcgtttcaatttaaaagaaaacgaagagaaactTCTGCTGATGTACGCGGAAAACTGCGTCAAAGAAGGAAACCCCTGCGAGAACAAGGACATCATGAAAGCCGCACTTCGCATACTGAACTCAAGGCCTGGCATGATCGAGAAGAAGATCTCGTATATTCCTACATTGTGGCATCAGGTGTTTCAAGACCGCCATccagaaatatttaaacttgTACAAGCAAAAACTGTCACTTGCGATTTGTGTGGATTTGAAACAGTTGAGAAAAAGTCCCTTGCTTGCCACATGAACTCACACAAGAAATTCAAACCTGAAAAAACCACGAAGCGGTACACTGAGGAAGAATTGGAACACGCTTGGAAGAAAGTGAACGCTGGCGAAGCAACAGTGTACAGTATGGCAAAGCTGTACGGAATACCAAAATCAACATTATCGCAGCGTATAAGAAAATCTAAAGGTCTTTGCAATCAACAAGGCGCTTTCAAATGTTCCGAATGCgacaagattttctcgtcaAGAAATTCCTTAAGAGACCATCTGtctaaatttcattttcctgtTCACGGCgagtttttatgcaaaacttGCGGAAAAGTTTATTCAGCATCGCACAAGTTGAAAGCACATACAAAACTGGTTCACACCAAAGGCGCATACTCATGCAAAGTAAAAGAttgcggaaaagttttcgagtaCCAAGTAAAACTCTCCAGTCATACCACGAGAACGCATCTTCCTTCCATTGCATGTGAAGTCTGCGGCGTTCTAGTGCGTCGTGGCACTCGATATGGTGTTCATATGAAATCTCATGACACAACGCGACAGATCAAATGTCCAACCGAAGGGTGCGACAAAACCTACACAACCACTAGATCTCTTGATTACCACGTCTTGAATGCACACGGTCCGAAATTGAATCTGAAATGTCAACAGTGCAACTCAAGTTTCCCGAACGAATGCAGGCTAAAAATCCACATCAAAAACATCCACAACGCTCAAATATATTTCTGCCCAGTCGTATCATGCCGTTTCAAGTCTAGGGAACTTTATCTTGTCAAGCGGCATCTGCAAAACCATAGAGACATTtctgaaaacatgaaaaatggattGTTGAAGAAACTTACACTGAAGTTaTCCACCAAAGCACGAACAGCGGAACTCATACCACCGGCTGAAAAACAGAAATACAAGCAGAAGTACAACAAGGAAACACTTGAAAAGGCGCTCGGTGAGATCAAGAATGGATCAAAAACAGCGCACGCTGCACACAAACAGTACAACATTCCGAAATCCACCTTAAGCCAATACATTCGAGGAACTCACGTGAAGGATCGAAAGTATCAAACCATCTTAAGCGCTGACAACGAGAAACTCCTATCAAATTGGGTCATAAACAGTGCTTCCACATCAACTCCAAAAACTAAGCGAGAAATTATGGTCGCTGCAGGAGAACTTGCTTCGTCACAACCAGGAAATCCTTTTAAAAACGTCATCCCAACAAGCGGCTGgttcaagagattttctgCTCGGCACAGCACTCAAGTTGCAAAAAGTAATCCACAAGCAATCGGTAAAGCCAACGCTGGTTTGAAAGCACAGCCGCCAGGCAAGAAAGCTAAAAGAACCAAGCAGCTGCTAAAAGTCATCTTGAATGAATCGCAGCTCCAAGCGGAATTGTTTACGGTCGAGAGTGATCTTGAAAACTAA
- Protein Sequence
- MSKELLNHKTKCRLCFRRVSLNRSSVKVDEKIQKKFHSLTSIELRLSETFSSRVCKPCCEQLSSTVSFQQKMIENQQKLYLHENETCLPNVEFVYVKEEQERTSNVLKIENVFSLKVKCDGSGINNSWITDLPGQDESNDITVDKELESLGPINDDQTVSFNSEKTPTNDKVVTRKELPRSYTEEELNQAIQVVKSGAMTCYKASKIFKVPSLTLACRISASVLKQQEELQLKEFVLRTVKEGKICKTSDLIDEAMKIIKGRENKKERNVRTLTPGWVSRFYGRHPDIADFKKLECDQCDYKTQSDSEMVLHMTIHDHGSTGEATSTSLQDQPEQNCEMKFTDNESDKEDPDDNFSDNRAVEDTILSPQPTNDETASSDPAIHKVVTRKRIPRTYTKEDLDLAIQAVKSGAMTNNKAARTFKIPRETLACRTSGKYLSGHIGRTNILKQQEELQLKEFVLRTVKEGKICKSRDLIDEAMKIIKNRETKKDRNVRTLTSGWVTSFYGRHPEIEAFRKPKKLECDQCEYKTQFESEMVLHMTIHNRVSTGEAASTSLQDQLDQNCEMNFSEIESDEEDFDDNSSDFARFNLKENEEKLLLMYAENCVKEGNPCENKDIMKAALRILNSRPGMIEKKISYIPTLWHQVFQDRHPEIFKLVQAKTVTCDLCGFETVEKKSLACHMNSHKKFKPEKTTKRYTEEELEHAWKKVNAGEATVYSMAKLYGIPKSTLSQRIRKSKGLCNQQGAFKCSECDKIFSSRNSLRDHLSKFHFPVHGEFLCKTCGKVYSASHKLKAHTKLVHTKGAYSCKVKDCGKVFEYQVKLSSHTTRTHLPSIACEVCGVLVRRGTRYGVHMKSHDTTRQIKCPTEGCDKTYTTTRSLDYHVLNAHGPKLNLKCQQCNSSFPNECRLKIHIKNIHNAQIYFCPVVSCRFKSRELYLVKRHLQNHRDISENMKNGLLKKLTLKLSTKARTAELIPPAEKQKYKQKYNKETLEKALGEIKNGSKTAHAAHKQYNIPKSTLSQYIRGTHVKDRKYQTILSADNEKLLSNWVINSASTSTPKTKREIMVAAGELASSQPGNPFKNVIPTSGWFKRFSARHSTQVAKSNPQAIGKANAGLKAQPPGKKAKRTKQLLKVILNESQLQAELFTVESDLEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00199445;
- 90% Identity
- iTF_00199445;
- 80% Identity
- iTF_00199445;