Bant008364.1
Basic Information
- Insect
- Belgica antarctica
- Gene Symbol
- bab2
- Assembly
- GCA_000775305.1
- Location
- Belgica.243:56219-79301[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.2e-12 2e-09 36.3 0.0 1 39 700 739 700 743 0.91 2 4 1e-11 9.5e-09 34.1 0.0 2 39 755 792 754 795 0.94 3 4 6.5e-16 5.8e-13 47.6 0.0 3 45 811 854 809 854 0.97 4 4 2.3e-18 2.1e-15 55.4 0.0 1 41 861 902 861 904 0.97
Sequence Information
- Coding Sequence
- ATGATAATAACATTGGTTCATCCACGAAAAATCAGTAAAATAAGCTTAAAGTGCAAAATCCAGACGATTGAAGGCCGCCCAGTGCCACCAGCAGTGAAATGTGATCGGATAAACATCGAATCACCGAAAATCAATAAGTccaaaaaaaggaaaaataaaaattatattgtTCGTCTCGCAAGTTATTGTTTTCGAGGtaggcgaagaagaaaattcgagGAAAAATTTTATGTCGGAACTCATCTAGTCAGTCGAGCTCAAATCCAAAGAATCTGCAACAGTGCAAGCAGGAAACCATCGCCAAAATCAAGCCATTTCCCGCACCGAGTCACGTTACCAAAGGTCCATGCCAGTCAAATTCAAACCTCGAACCAGCACCAGTACTATTCACTTAGATGGAACAATTATCAAAATAATTTAACGGACATGTTCCATGAGCTCCTGAATGCAGAGAAGTTTGTGGACGTCACATTAGCATGCGAACAAAACTCACTGAAATGTCACAAAGTAGTATTATCAGCATGCTCAAGCttcttccaaaagcttctcgtAGAAAATCCCTGCAAGCATCCAATTATCATCATGCCCCCAGAGGTGGCATTCGCTGACCTTCAGTTCATCATTGAATTCGTGTACCGGGGGGAGATCGACGTGTCCGAAGCCGAATTGCAAaGTTTAATTCGAACGGCCGAACAGCTAAAAATCAAAGGATTGTGCGAGATAAACGATATTGACCACACCAACGCAGCTGAGAGCGACGATACCGAGGTCATTTATCCGCCACATAAGAAGATTCGCGCATCGCGGAACTACGAGAACAACAATAGCTTAtccaacaacaataaaaacttgtcaGTGCGTGAAGAATTTCTCCCGTCTTTGACCAAATCAGCAACTAATTCGACAGACAAAGATGCCCAGCAGTCAGTAGCGTCGCACGAAGTAATCAAGCATAAGTCTAAAGCCAcatcaaaagaacaaaaaaacgcGTCGAGTTCATCCACTTCACAGCAAGCAAAAAACATGGCGAGTCTCGAAATGGGAATGTTTCAGAACTTTCAGAACGGTAACGTCGTCATGGGCGTACCACTCACGTACATGGATTTTGCACCGGAACCACCCGCACCGACCGCGACGCCCGTCATCACTACCGAAATGAATTGCAATCCAAGTCACGACACGAAAGATTTATCACACTCGACGCCGATTAACGGTACCGAAAATGCCAGAATAATTAAGTTCGAGACATTGCGATCGCTCGATCCAACTACTGAAACGATCGTCGAGTTTGATAATTCCATTCAACATTCCATTTGTCGTCTAGATCAAGTGGCCTCGTCGCATCCGTCAGTGTCACAAAGCAGCCCCATTCTCCACCACTCACACCACTCGCCGGCTCAGGTGCAGATCATAACGACCTGCCCGTCGCCGGTGACTTCCCTCAGCGAGTTGGGCATGAAAACTACTTCGATAATCACGACCGCCTCGCATATCAATCACCAGCAAAGCGAAGAGAACTATCACCGACAGATTCAGGAACAACAGAACCAGCAGATCCAAGAACATAACAGACAGGAACACAATCGGCAAATTCAGGAACACAACAGACAGATTCTTCAGCAACAGCAAGATCAGCAGCGGCAAGTGAACCAGGGCTCGAATGGAAATGGACAAACAATTTACCAAACGATCATTCACCCGTCAAAccaccagcaacaacaacagcagcagatcACAATCCAGCAGCAATCACGTCCCATCATCCAGCACCATCAAATCATTGAAACGATCAAGACTGAAGACGTTGACATCAAGCCCTCGATACACGAGCTTATGTCAGTTGGAAGCATGGATGTCGACGGTCAGCAATCGTCGAATAACGGTAGCGATAATATTCATGGCATTAGTTGTACACCGGAAATCGGAAATATGATGACGACACCCACGCAAATCGAAATGTACCATTCAGACACAAGCGATGACTCCAAAATGCAAACTGATCAAAACGGCTCCGGCCAGCTACAGTACATCACGCTGGGCAACAACAACTCGACACCAACTAGTGATGGCAAGAACAACAGCGGACCGAAGACCTGGACACCGAACGACATGGAAGCGGCACTGGAGGCTCTGAGGTCACACAACATGAGCCTGACGAAGGCATCTGCGACTTATGGGATTCCATCGACAACATTATGGCAGCGCGCACACCGCCTCGGCATTGACACGCCCAAGAAAGAAGGCCCAACGAAGACTTGGAACGAAGATTCCCTCAACAGCGCCCTTGATGCACTCCGCACCGGCACGATTTCGGCGAACAAAGCGTCAAAAGCCTTCGGTATTCCGTCTTCCACACTCTATAAAATCGCCCGGCGAGAGGGAATCAGACTCGCCGCACCCTTCAATGCAGCTCCAACAACTTGGTCAGCTGAAGATCTCGAAAAAGCTTTAGAAGCAATAAGAGCTGGTGCAGCTTCAGTTCAAAAGGCTAGCACCGAATTTGGAATCCCCACAGGAACGCTTTACGGTCGTTGCAAACGCGAGGGAATCGAGTTGTCAAGATCAAATCCCACTCCTTGGTCCGAAGATGCAATGATGGAGGCACTCGACGCTGTTCGTGTTGGGCAAATGTCGATCAACCAGGCAGCGATTCACTTCAACTTACCGTACAGCTCACTGTACGGACGCTTCAAGCGCGGCAAGTACGGTGACCCACCCAACGGCAATACCAACAACGATTCATCACACAACACGACTGAACACAGCCCCGACAACTCGATGAGCTATGGACATCACACTCTGATCGCTGACTCGAATGCCACCACGCAGCTTCAAGACAACCAGATCATCTACCAGCAGCACTACTCACCGTCGCCGCAACAAATTATCCATCAACAACCGCCCCAACAAATCTATCATCATCAGCaaattatttatcaaaatcatcCACAGCCGCCGCAGATTCTGCAGATTCATCAGATAAAGAAGGAGACCAGTTGA
- Protein Sequence
- MIITLVHPRKISKISLKCKIQTIEGRPVPPAVKCDRINIESPKINKSKKRKNKNYIVRLASYCFRGRRRRKFEEKFYVGTHLVSRAQIQRICNSASRKPSPKSSHFPHRVTLPKVHASQIQTSNQHQYYSLRWNNYQNNLTDMFHELLNAEKFVDVTLACEQNSLKCHKVVLSACSSFFQKLLVENPCKHPIIIMPPEVAFADLQFIIEFVYRGEIDVSEAELQSLIRTAEQLKIKGLCEINDIDHTNAAESDDTEVIYPPHKKIRASRNYENNNSLSNNNKNLSVREEFLPSLTKSATNSTDKDAQQSVASHEVIKHKSKATSKEQKNASSSSTSQQAKNMASLEMGMFQNFQNGNVVMGVPLTYMDFAPEPPAPTATPVITTEMNCNPSHDTKDLSHSTPINGTENARIIKFETLRSLDPTTETIVEFDNSIQHSICRLDQVASSHPSVSQSSPILHHSHHSPAQVQIITTCPSPVTSLSELGMKTTSIITTASHINHQQSEENYHRQIQEQQNQQIQEHNRQEHNRQIQEHNRQILQQQQDQQRQVNQGSNGNGQTIYQTIIHPSNHQQQQQQQITIQQQSRPIIQHHQIIETIKTEDVDIKPSIHELMSVGSMDVDGQQSSNNGSDNIHGISCTPEIGNMMTTPTQIEMYHSDTSDDSKMQTDQNGSGQLQYITLGNNNSTPTSDGKNNSGPKTWTPNDMEAALEALRSHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKTWNEDSLNSALDALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWSAEDLEKALEAIRAGAASVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMMEALDAVRVGQMSINQAAIHFNLPYSSLYGRFKRGKYGDPPNGNTNNDSSHNTTEHSPDNSMSYGHHTLIADSNATTQLQDNQIIYQQHYSPSPQQIIHQQPPQQIYHHQQIIYQNHPQPPQILQIHQIKKETS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01352824;
- 90% Identity
- iTF_00199188;
- 80% Identity
- iTF_00199188;