Bant000997.1
Basic Information
- Insect
- Belgica antarctica
- Gene Symbol
- retn_2
- Assembly
- GCA_000775305.1
- Location
- Belgica.1216:1038-7411[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-20 1.5e-17 63.1 0.0 13 89 1 75 1 75 0.96 2 2 4 5.4e+03 -2.8 0.0 9 29 173 193 153 210 0.56
Sequence Information
- Coding Sequence
- ATGCAAAAGCGAGGCACACCAATCAACCGTCTTCCCATCATGGCTAAATCAGTATTAGACTTGTACGAACTCTACAATTTGGTGATAGCGCGCGGCGGGCTTGTCGATGtgatcaacaaaaagttgtggCAGGAAATCATCAAAGGACTTCACTTGCCGTCAAGCATCACAAGCGCAGCATTCACGTTAAGGACACAattcatgaaatatttgtaCCCTTACGagtgcgagaagaaaaaattaagcacACCAGCTGAACTGCAGGCAGCGATCGATGGCAACAGACGCGAAGGTCGCCGGACGAGTTACGGACAATTTGAGTCGCAAATGCAACAACAATTGCAAATGCCTCAGATGCAAAGATCACCGATTCCCAACAGTCTCCAGCAGATGTCCCCACTGTCATTGGTCACTCACGGCAATCCACAGAATGCACACAGACTCATGGGCGCACCGCCCGTCGGACAACTGCCCGGCATTGTCCCGCACGACATCGAACAGCGGATGCTCGAGTACATCAAACTCTTCCAAGCACCAAAAGACATGAAGCgTCCACAAAGCCCAGACGTGTCCCGTGAAGCACTCAACGCAATCGAGATGTCTCGAATGGCGCTATGGAACATGTACCAGAACGCGAGTCCACCAAATCAGCAGCACACGACTAGTCCATCTTTAGTACAACGGGAAGCATTGAACCTCCAGCGTGAATCACCATCTCCCATCCCACCCCAACAATCACCCATCATTTCCATCAAACGCGAACGCGATCAGAGCGACATCAACGACTACCACGTTCCACCCGCAAAGAGAGGGTTGGTGCGCTCCATCAACGACCTGAACAGAAAAGGTTCGATGAACAACAATCACCACcacatcagcaacaacaacaactcgcACGTGACACCAACGAAAGTTACCAGCAAGTCTGATCGATCGGATTCGCCCAACACCGACAATGGAAGTCACCACCGTTCGCCTTCGACTCATCACAAGCAGCAGAACGGCTCGGACAACCTCGGTACGACGATGCTGAACGGAATGCAGTTCAAAATCATCAGCAAAGAAAACTCATCGACTGGTGAACCCCAATTGGTTGTGAAACTTGAGGTCAACGGCATATCCTTCGAAGGCGTGCTTTTCCCTAACCCAAACTCGTCACCTTCAGCTTCAACCACGTCTTTGACTCCTTCAAACGCATCGACAGAGTCGATGGTGTCGCCAACCAAGAACTCTTCACCTGGAACAATGACTGAAGAACACAAAATGACACAGCAGCCGATTGTGTCGtcttaa
- Protein Sequence
- MQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQFMKYLYPYECEKKKLSTPAELQAAIDGNRREGRRTSYGQFESQMQQQLQMPQMQRSPIPNSLQQMSPLSLVTHGNPQNAHRLMGAPPVGQLPGIVPHDIEQRMLEYIKLFQAPKDMKRPQSPDVSREALNAIEMSRMALWNMYQNASPPNQQHTTSPSLVQREALNLQRESPSPIPPQQSPIISIKRERDQSDINDYHVPPAKRGLVRSINDLNRKGSMNNNHHHISNNNNSHVTPTKVTSKSDRSDSPNTDNGSHHRSPSTHHKQQNGSDNLGTTMLNGMQFKIISKENSSTGEPQLVVKLEVNGISFEGVLFPNPNSSPSASTTSLTPSNASTESMVSPTKNSSPGTMTEEHKMTQQPIVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -