Bant005005.1
Basic Information
- Insect
- Belgica antarctica
- Gene Symbol
- retn
- Assembly
- GCA_000775305.1
- Location
- Belgica.496:21371-26784[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-26 3e-23 81.3 0.0 2 89 159 244 158 244 0.96 2 2 4.9 6.7e+03 -3.1 0.0 28 38 287 297 274 312 0.58
Sequence Information
- Coding Sequence
- ATGGAGTTGGATCGTGAAGAACACTTCTCGGACGATGATTCACCGATGTCAGACTCGACGCCACATTCGGAGGACGATGAAAAGCACTGCGAGGAGTTCCCCCGGTCGCCGCCATCAAAGTACCTCGATGACTCGCCTCCACATGACGTCAGCGAAGCGTACGCCCAGCAACAGCGCGAGCTTCTCGAACGATTAAAGGAGCAGTTCTCGTCCTTTCCATACAGCAATCACCCGCCCAACTTCGCCGGCATCGACCTTTCCGAGCAGGCACACCAGAGGCTGCAAGCGTCAGAGGCTCCAAACGACTTTCCTTTCTCATTTCCAACACCACCACCGAGCAAAGGCGAAGATGACGTGAAAATCTCGACGCCGGCATCGTCGAAGAAGAGCAGCAATCAGAACAGCAGCAGTTGGAGCTACGAGGACCAGTTCAAGCAGGTTAGACAACTCTACGAAATTAATGACGATCCAAAGCGCAAAGAATTCTTAGATGATTTATTCATGTTCATGAAAGATCGAgGCTCACCGATCAATCGTCTGCCCATCATGGCGAAGTCAGTTCTCGATCTGTACGAGCTCTACAAGCTGGTGATAGGCCGCGGCGGTCTCGTGAACGTCATCAACAAGAAATTGTGGCAAGAAATCATCAAGGACTTGAATCTCCCGTCGAGCATCACAAGTGCAGCTTTCACGCTACGCACTCAGTACACAAAGTACCTGTATCCGTACGAGTGCGAGAAATACAATTTGTCATCGGAGACCGAACTACAAGCTGCTATCGAGAACAACAAACGTGACGGTAGCCGAAGATCGACTTCATCAAATTACAGCAATCAATTCACTCCGCAGTCGCCGCAAACTCAACAGGTACAGCAGCATCAACTGCAGATGGCAATGGCAACACAACTCGCTGCAAACGCAAGCAACGCCGGAGTCAACCTTAGCACCGCTACAAACGGACACAGCAGCCAGCCAGCAGCGGAACCGTCGAATAGCCAGCAACTTAACGACATGCAAATGGCACAGCAGCggtttttgatgatgatgtatTTGTACAATCAATTCTTAGCCGCGCAAACGCAGTCGACCTGA
- Protein Sequence
- MELDREEHFSDDDSPMSDSTPHSEDDEKHCEEFPRSPPSKYLDDSPPHDVSEAYAQQQRELLERLKEQFSSFPYSNHPPNFAGIDLSEQAHQRLQASEAPNDFPFSFPTPPPSKGEDDVKISTPASSKKSSNQNSSSWSYEDQFKQVRQLYEINDDPKRKEFLDDLFMFMKDRGSPINRLPIMAKSVLDLYELYKLVIGRGGLVNVINKKLWQEIIKDLNLPSSITSAAFTLRTQYTKYLYPYECEKYNLSSETELQAAIENNKRDGSRRSTSSNYSNQFTPQSPQTQQVQQHQLQMAMATQLAANASNAGVNLSTATNGHSSQPAAEPSNSQQLNDMQMAQQRFLMMMYLYNQFLAAQTQST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -