Bsom034123.1
Basic Information
- Insect
- Bedellia somnulentella
- Gene Symbol
- nfxl1
- Assembly
- GCA_963576735.1
- Location
- OY755193.1:13103625-13106087[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.5 1.1e+04 -2.2 0.1 12 18 69 75 69 76 0.84 2 20 2 4.5e+04 -7.8 5.6 15 19 134 138 133 138 0.81 3 20 0.052 1.2e+03 1.0 0.2 4 10 169 175 168 176 0.96 4 20 3.1e-07 0.0069 17.7 15.9 3 19 186 202 185 202 0.95 5 20 3.4e-06 0.076 14.3 10.0 1 18 237 254 237 255 0.93 6 20 1.7 3.8e+04 -3.9 0.7 5 10 279 284 279 285 0.89 7 20 1.3e-08 0.0003 22.0 10.5 1 19 290 308 290 308 0.98 8 20 0.83 1.9e+04 -2.9 1.3 5 10 332 337 332 337 0.94 9 20 1e-07 0.0024 19.2 17.5 1 18 344 360 344 361 0.97 10 20 1.2 2.8e+04 -3.4 0.4 7 11 365 369 365 369 0.84 11 20 6.7e-07 0.015 16.6 16.7 1 18 395 412 395 413 0.97 12 20 1.1e-09 2.4e-05 25.5 13.3 1 19 422 440 422 440 0.99 13 20 2 4.5e+04 -4.8 3.5 9 12 468 471 458 473 0.57 14 20 9.7e-05 2.2 9.7 5.9 9 19 488 498 486 498 0.91 15 20 0.00037 8.2 7.8 5.2 1 11 507 516 507 517 0.95 16 20 0.31 6.9e+03 -1.5 3.5 14 18 546 550 546 551 0.87 17 20 0.44 1e+04 -2.0 0.3 8 11 567 570 566 571 0.78 18 20 9.9e-06 0.22 12.8 7.4 1 11 587 597 587 598 0.97 19 20 0.00082 18 6.7 16.3 3 18 628 644 627 645 0.86 20 20 3e-07 0.0068 17.7 13.9 1 18 686 704 686 705 0.90
Sequence Information
- Coding Sequence
- ATGTCGCGGAAATACCGTGATGCCGCTGCTAAATTGCAGCAGAATGTTCAGAAACATCTGCATGATATGAAGGAACTCTCATCATCAGAAGATGAAGAGCCTTATGAGCCCAGCGTCTTGAATGGAGTCTTGAAAAACTACACTCATGGGGGAGGTGACAACCAAATGCTGCAGCGAACAAAGAACCTCCTAGAAGAATCACTGAGTGGCCGGTGTGTGACTTGCTTGATTTGCATCGGTTCCATCAAAAGAATCCATCCTATATGGACTTGTCAGCACTGTTTTTCATACTTTCACCTGTCTTGTGTTCAGAAATGGTCTAATGATAGCATCAGTTTGAGATTAGACGAAGTAACTGCCCCTATACAGGTATACAAACCCAAAAAAGTAGAGTGGTGTTGCCCAAAATGTCGTCAGTCCTATTCTAAGAATGAAATACCTTCAAAATACTACTGCTTTTGTGGTAAAACTCCTGATCCTCCATTACATCCCTGGTACTTGCCTCATTCTTGTGGAGAAGTATGTGGAAAACGATTATCTGTGAGCGACAACTGTAAGCacaaatgtcttttactttgcCACCCTGGACCATGTCCCCCGTGCCCACAGATGGTGAATGGTATATGTTATTGTGAAAAAGAGAGAAAGAAAGTTAGATGTAGCTCTTCTAAATGGTCTTGTGGACAAAAATGCAAGAAACTGCTTCAGTGCAACTCCCACAGTTGTGATAACATATGTCATGAAAATGACTGTCCCCCGTGTCTGTACACAAGCTTACAACCATGTGAGTGCGGTTCTGAAACAGTAAAAAGACCATGTAATGATCCAACATGGAGgtgtataaaaaaatgtaacaagCCTTTTTCCTGTGGCTTTCATAAGTGTGAAACAATATGTCATTCTGGGGACTGTGGTCTTTGCCCAAATTCTGGCATGAAGTCTTGTCCTTGTGGGGCTGTCCAAAGATATGTAGAGTGTCCTGATTCCATGGAGACCTGCATAGAAACATGTGGTAAAGAACATGAGGACTGTGGCCATAGTTGTCCAGAAAAGTGCCACAAAGGCCAGTGCCCTCCATGCCTTGTACTCATTGAAAAGAAATGTCATTGCAGGACCCATGTCAAATCATTACCATGCAGCAAAGATTTTAGGTGTGACACAAAATGCAGAGGCATAAGAGATTGTGGAAAACATGCTTGTGCAAAGAAATGTTGCAATGGCAACTGTCCTCCATGTGAAAAACCATGTGACAAACGCCTGCAATGTGGGAAACACAAATGCAGTATGGTGTGTCATAATGGCCCTTGCTATCCATGTCCAAGAGAGTCACAGGTCACCTGCCGCTGTAAGGAAACATCTGTCACAGTCCCATGCGGTCGAGAGAAGCATACAAAACCTCCAAAATGTCACAAGCTCTGCAAAATCAAATATAAATGTGGCCATAGCACTGAGAATGCTCATAAATGCCATTTTGGTGATTGTCCGCCTTGCAAAGCTATATGTGACAAAACTCACAAATGTGGACACAGCTGCCCATCTATCTGTCATGCATATGTTCCAGTTGTTTTTAAGCAGATTGAGAAACCAGCCACACCCTGGGAGATTCAAGCACcagttactaaaattatggcatTAGATTGCCCGCCATGCGAGGTGCCTGTGACAATGGAATGTTTTGGTAAACACGAGACTTCAGCCCAACCATGCCATCAGGCTTCCAGATATTCCTGTGGCAGGAAGTGTGAGAAACCATTGACATGTGGTAACCATACATGTCAGAGAAATTGCCATCTTTTTGAACATGATCCAAAGTATCCGCATGTGCATCATGTTTGTGAAGCTTGTAACAAGGAATGTGTTGTGGCTCGCCCAAAGAAATGCATTCATAAATGTCCAAAGCAATCTTGCCACCCGGGACCATGTCCGAAATGTGAAATTCAAAGAAAAATTCCATGTTTTTGTGGTTTAAATGAGTTGTATCTTCGTTGTAACGAGTTAGAAACGGCTACAGAGGAAGAGTTGTCCTGTCAGCTTCAGTGTCCAAAGAATTTGGGTTGTGGACATAGGTGTAAGAAGGTGTGCCACCCGGGGAGCTGTCCAGAACAAGTTTGTACTAAAAAGGTCAAAGTTTATTGTCCTTGTGGGAATGTGAAGAAAGAGGTGACTTGTAACACTGCCAAAGAAAATCCATTAGAATGTGATGTTCAGTGTGCAGATAAGAAAAAAGCTGCCCAGCTTGAGAAGGAACTCGAacagaaaagaaagaaagagctAGAGGAAGAAAGGAATAGAAAAGAGTTGGAGGAGTATGAATGGAAAATGAGTGGCAAAAAGAAGAAATATAAAGAGAAGAAAAGAGTTGAAAACAAGTCTGAtagtaatttcaaaaagtttctCGTTCCTATTGTttctattttcatatttttgatatcatttgtctattatttatttatgctaGAATAG
- Protein Sequence
- MSRKYRDAAAKLQQNVQKHLHDMKELSSSEDEEPYEPSVLNGVLKNYTHGGGDNQMLQRTKNLLEESLSGRCVTCLICIGSIKRIHPIWTCQHCFSYFHLSCVQKWSNDSISLRLDEVTAPIQVYKPKKVEWCCPKCRQSYSKNEIPSKYYCFCGKTPDPPLHPWYLPHSCGEVCGKRLSVSDNCKHKCLLLCHPGPCPPCPQMVNGICYCEKERKKVRCSSSKWSCGQKCKKLLQCNSHSCDNICHENDCPPCLYTSLQPCECGSETVKRPCNDPTWRCIKKCNKPFSCGFHKCETICHSGDCGLCPNSGMKSCPCGAVQRYVECPDSMETCIETCGKEHEDCGHSCPEKCHKGQCPPCLVLIEKKCHCRTHVKSLPCSKDFRCDTKCRGIRDCGKHACAKKCCNGNCPPCEKPCDKRLQCGKHKCSMVCHNGPCYPCPRESQVTCRCKETSVTVPCGREKHTKPPKCHKLCKIKYKCGHSTENAHKCHFGDCPPCKAICDKTHKCGHSCPSICHAYVPVVFKQIEKPATPWEIQAPVTKIMALDCPPCEVPVTMECFGKHETSAQPCHQASRYSCGRKCEKPLTCGNHTCQRNCHLFEHDPKYPHVHHVCEACNKECVVARPKKCIHKCPKQSCHPGPCPKCEIQRKIPCFCGLNELYLRCNELETATEEELSCQLQCPKNLGCGHRCKKVCHPGSCPEQVCTKKVKVYCPCGNVKKEVTCNTAKENPLECDVQCADKKKAAQLEKELEQKRKKELEEERNRKELEEYEWKMSGKKKKYKEKKRVENKSDSNFKKFLVPIVSIFIFLISFVYYLFMLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -