Bsom013437.1
Basic Information
- Insect
- Bedellia somnulentella
- Gene Symbol
- gata3
- Assembly
- GCA_963576735.1
- Location
- OY755176.1:14612193-14628576[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.8e-20 3.2e-16 59.9 4.7 1 35 53 86 53 87 0.98 2 2 1.7 9.7e+03 -2.4 0.0 25 28 164 167 159 175 0.73
Sequence Information
- Coding Sequence
- ATGGAAATCGCGGACGCGGCACTCACGTCAGGTATCGAGCTGTTTTCCCAACGCCGCTCTTCACTCGACTCGTGTGAAAACTCTCCCGTGCAGTCGGCCGAGTGGCTGGAGAACATCTCGAAACATAAAACCGCCCACTCGCTACAGGGTCGGGAGTGCGTGAACTGCGGTGCCACGAGCACCCCGCTGTGGCGGCGCGACGGCACGGGCCACTACCTCTGCAACGCCTGCGGACTCTACTACAAGATGAACGGACAGAACCGACCGCTTATAAAGCCTAAACGAAGATTGGCGGGCGAGCCGGGTCCGCCGCCGCTAGTGCAACAACGCctcgataataattataaatatgacGCGGTGCTAAACTGGCCGACTGCTGACCTCGTGAACCTCACCATCCTTCGTCTACACATAGACCGAGTGCCCGCTCGTACCGTTCCCACAGCTAATTACCGATCTGTGGGATTTCAAGCAAATGCATTAAAATCAGCATGTTGGATCCAGCGGATTGGCGCGCCGCGAGGACAGGTGGCCGCGTTCGATGCCTCCGTATTTACGACTTCCGCGGCCTTACGCAGCTTTGCTACGGAACCCCGCTGTCTTCActcaaaaacaattttgttatACACCTGTTTATTTGATTAA
- Protein Sequence
- MEIADAALTSGIELFSQRRSSLDSCENSPVQSAEWLENISKHKTAHSLQGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLAGEPGPPPLVQQRLDNNYKYDAVLNWPTADLVNLTILRLHIDRVPARTVPTANYRSVGFQANALKSACWIQRIGAPRGQVAAFDASVFTTSAALRSFATEPRCLHSKTILLYTCLFD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -