Bsom035283.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bedellia somnulentella
Gene Symbol
ZNF296
Assembly
GCA_963576735.1
Location
OY755195.1:2105827-2123060[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 0.0041 0.6 11.9 0.7 1 23 84 106 84 106 0.95
2 14 0.0015 0.22 13.3 1.4 1 23 266 288 266 288 0.99
3 14 2.4e-05 0.0036 18.9 0.4 1 23 294 317 294 317 0.98
4 14 0.0072 1.1 11.2 4.0 1 23 322 344 322 345 0.95
5 14 1.1e-05 0.0016 20.0 1.5 1 23 480 502 480 502 0.99
6 14 4.2e-06 0.00061 21.4 0.2 1 23 508 530 508 530 0.99
7 14 0.0032 0.48 12.3 2.3 1 23 592 614 592 614 0.96
8 14 0.024 3.5 9.5 1.6 1 23 649 671 649 671 0.96
9 14 0.0014 0.21 13.4 3.2 1 23 677 699 677 699 0.96
10 14 0.00021 0.031 16.0 2.9 1 23 707 729 707 729 0.98
11 14 1.8e-05 0.0027 19.3 0.9 2 23 775 796 775 796 0.97
12 14 0.0017 0.24 13.2 3.8 1 23 811 833 811 833 0.96
13 14 1.4e-06 0.0002 22.9 0.7 1 23 839 861 839 861 0.98
14 14 5.3e-05 0.0078 17.9 5.2 1 23 867 890 867 890 0.98

Sequence Information

Coding Sequence
ATGGAAAGCAGCTCTGAAACGGATCCACTTGGAAATGATTATGTCTCTCAAGCATATTTAGTTGCAGCTCTACCTGAAATAAAATCGGAAAAtgatattttgttaaaaatCAAAGAGGAAAAAGACCCTGATGCGGAGCATAACATTTTTGAACCAAATGTGGATATCAATGAACCACaaaaagagaagaaaaaaaggaaaagaaaaaaatgtggCTCAATAGAGGAAAATCCAGATGGCATACCTTTCTATGCATGTGCTGTTTGCAACGTGAAATACACAAACTTGCAACACCTCCAAAACCATGTGACTGAACACAAAGATAGACTCACAAGTTGGGATTTAAGAGTCAAGAATATgaaattgaaaaagaaattaaaaaaggaaaaaaagagAATGAAAAAAATCAAAGTTGAGTCGTTAATTAAGCAGGAAATCAAAGAAGAGCCTGAGGTTCCTCTGAATTTTTCAGAATACCTTCAAAATATGAGCGAGGATATTAAAGATATGgatgtaaatttaaataatgataGAATAAGTAATGATAACAGTGTTTTAAATAGTGAAAATGGAAGTTTAAGTAATGATAATAAAGTTTTAGATAACACAAATGAATGTTTAATAAGCAATAATGAAGGTTTAAGTAGTGGTACCTGTGTAGAAAGTGTCGGTAATATTGATAATGGAATTCAGTCAACAAGTATAAGCTCAACGAAAAATAACGGAGAAGGTCCAAATGAGGATGCAATGAAAAAAGAATTCAGTAATGGCGCTGATCCAAATCTAGAGAAGATTTTTAAATGTGGTACTTGTGAAAAACAATTCTCATTGGGATACTATTTGAAACTACATGTGAGATCTCATACAGGTGAAAAACCCTACACCTGTGCGGAATGTGGCCTATCCTTCATAACAGCAAGCAAGTTGGGACGACACACCAAGCGCACCCACCTCGCAGTGAGGTTCGTGTGTCGGGTGTGTCGCCGCCCTTACACCCGCTTGGAGTTCCTCACCAGGCACTTTAATAAGCATCATGCTGATGATAAGATTGAGAATGAGCCTTATGATTACAACGCCATCCTGCCATACCTAAAAGAGTTAGAAGCAGAATTGGAGCAGAAAAAGCAAGAAGAAGAGAAGCAAAGACTGGCAGAGAAGGAGGCAGAACTTCGAGAGCAGTTCAAGAGTGAGCCCGAGTGGTTAGATTTGCGAAGTGGAGAAGGAGATTTAGGAGAAATTAAGgtgGAACAAATAGAGCCTCCTCCTCTGGAGGAAGCTCCCCCGGTCCCAGGTTCATCTCCAGAGCCAGCCCCAGACGATGCTTTCGACAACGAACCTATGCAGTTTTCTGACCCATCAGACGAAGAATATTTCCCAGACAACACATGGGTGTCCCCTGTGACCCCTAGCCCCCAAAAGACCCCTAAAGACCCCCAATACTCATGTCCCCACTGTTCCAAGCCTATTCGGTCCAAGGCGTACCTCAAGGTACATTTGCGTACCCACTCGGCTCAAAGACCGTATCGTTGTCCTGTTTGTGACAAGGGGTTCATCACTTCCGCCAAGATGAATCGTCACGTGATCACACATCCGGAGTGGAACGGTGAGAAATTAGAAATGGGAGAGAGTGATATCAAAGAAGAGTTACCAGAAGAAGGAGATGAATCAGTtccaaagaaaaaaaaacgtcgCAAACGCAAGTCTCCCTCCTCCCCCACGGTCAAGCTCGAGTCGGACGAAAGCTCCTCGCAACGCAAACCAAGGAAAAGGCCTCATGCTTGCGAATTTTGTGGGAAAAAGTTCCTGTACTTGGAAGCTTTGCAAGTTCATATGCATACTCACAGCGGCGAGTCTCGTTCGTTTTCTTGTCGTTTCTGTCTATCCCCTGCCGAGGACGAGGCGACATTGCAACAGCATGAGAGCGAACACAATGGACCGAGGCCCTACCTTTGTACCATCTGTGGGAGACAATATCAGAAACGGGAGTCTATGttatacCACCGCCGCCAACATTCGGCCCCAAAGGCGTTCCAATGCGAGCGTTGTCCGCGAACGTTCTCCGCGAACTGCAAGCTGCAGCGACATCGCTCGGCGCACTGCTCGAGGTCAACGACCCGCTACGACTGCCCCGTGTGTGCGCACAGCTTTAGGACGCGCTACCACGTGACCGTGCATCTTAACACGCATGCTAGGGAGGGActAATCCACGAAGAAAATCGCAACCAAGTGCTGGCGATGGTGTTACAAAACGTGAGGAAGATTCCCGTAGAGGGTAGCGGGGAACAGGGGGACGAGCCGGTAGAACAAGACGAGAGAAGTCGCGTGTGTAATATATGTGGAgagGTCTTCAACCACTTCTACTACCTCGAGCAGCATCTAAAATCTCACGCCTCGAAACTGACAGAGTTAGATcaagaagaagaaaagaaacATATTTGCAAAGTGTGTAACAAAGGTTTTAAGTTATCGTACTACCTAAAACTGCACACTTTCACCCATACTAAGGAAAAGCCTTTTATTTGCCAGCAATGTGGAAAAGGCTTTATCACTAAAGGAAAACTGAAAAGGCATTTGGAAACCCATGCTGGACTGAAGAAGTACCAATGTCACATATGCTGTAAATTTTTCACGAGACCGAGCTATCTGAGGATTCATGTGAGAACGATACATGGTACTCAGGACTATaattttaaaactgattttgaTTATGATGGGGTCCCTGATGGTATGGGGATGGTTAGCAATGAGTGA
Protein Sequence
MESSSETDPLGNDYVSQAYLVAALPEIKSENDILLKIKEEKDPDAEHNIFEPNVDINEPQKEKKKRKRKKCGSIEENPDGIPFYACAVCNVKYTNLQHLQNHVTEHKDRLTSWDLRVKNMKLKKKLKKEKKRMKKIKVESLIKQEIKEEPEVPLNFSEYLQNMSEDIKDMDVNLNNDRISNDNSVLNSENGSLSNDNKVLDNTNECLISNNEGLSSGTCVESVGNIDNGIQSTSISSTKNNGEGPNEDAMKKEFSNGADPNLEKIFKCGTCEKQFSLGYYLKLHVRSHTGEKPYTCAECGLSFITASKLGRHTKRTHLAVRFVCRVCRRPYTRLEFLTRHFNKHHADDKIENEPYDYNAILPYLKELEAELEQKKQEEEKQRLAEKEAELREQFKSEPEWLDLRSGEGDLGEIKVEQIEPPPLEEAPPVPGSSPEPAPDDAFDNEPMQFSDPSDEEYFPDNTWVSPVTPSPQKTPKDPQYSCPHCSKPIRSKAYLKVHLRTHSAQRPYRCPVCDKGFITSAKMNRHVITHPEWNGEKLEMGESDIKEELPEEGDESVPKKKKRRKRKSPSSPTVKLESDESSSQRKPRKRPHACEFCGKKFLYLEALQVHMHTHSGESRSFSCRFCLSPAEDEATLQQHESEHNGPRPYLCTICGRQYQKRESMLYHRRQHSAPKAFQCERCPRTFSANCKLQRHRSAHCSRSTTRYDCPVCAHSFRTRYHVTVHLNTHAREGLIHEENRNQVLAMVLQNVRKIPVEGSGEQGDEPVEQDERSRVCNICGEVFNHFYYLEQHLKSHASKLTELDQEEEKKHICKVCNKGFKLSYYLKLHTFTHTKEKPFICQQCGKGFITKGKLKRHLETHAGLKKYQCHICCKFFTRPSYLRIHVRTIHGTQDYNFKTDFDYDGVPDGMGMVSNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-