Basic Information

Insect: Bedellia somnulentella
Gene Symbol: -
Assembly: GCA_963576735.1
Location: OY755195.1:1723820-1736053[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.0052 0.76 11.6 0.0 2 21 156 175 155 176 0.92

2 28 1.7 2.4e+02 3.7 0.4 3 23 184 204 183 204 0.94

3 28 0.29 43 6.1 0.4 2 23 210 232 209 232 0.92

4 28 0.00067 0.099 14.4 0.3 1 23 237 259 237 259 0.93

5 28 0.22 33 6.5 3.6 2 21 263 282 262 283 0.93

6 28 0.00034 0.05 15.3 2.0 2 23 327 349 326 349 0.95

7 28 0.14 20 7.1 2.4 1 23 382 404 382 404 0.98

8 28 0.00091 0.13 14.0 2.4 1 23 410 433 410 433 0.98

9 28 0.00047 0.069 14.9 0.1 1 23 442 465 442 465 0.97

10 28 8.8e-05 0.013 17.2 1.6 1 20 597 616 597 618 0.92

11 28 1.4 2.1e+02 3.9 0.5 2 23 623 644 623 644 0.92

12 28 0.19 28 6.7 3.1 3 23 651 672 650 672 0.92

13 28 0.16 23 6.9 2.8 1 23 677 698 677 698 0.88

14 28 0.15 22 7.0 5.8 1 21 701 721 701 722 0.93

15 28 0.00075 0.11 14.2 0.4 1 23 734 757 734 757 0.94

16 28 2.2e-05 0.0032 19.1 0.6 1 23 763 785 763 785 0.98

17 28 0.013 1.9 10.4 0.3 2 23 793 814 792 814 0.97

18 28 0.027 4 9.3 1.2 1 23 820 843 820 843 0.97

19 28 1.4e-05 0.002 19.7 0.6 1 23 851 874 851 874 0.96

20 28 9.2e-05 0.014 17.1 0.9 2 20 987 1005 986 1007 0.93

21 28 0.0028 0.41 12.5 0.1 3 23 1042 1063 1041 1063 0.98

22 28 4e-05 0.0059 18.3 3.9 1 23 1068 1090 1068 1090 0.97

23 28 0.069 10 8.1 3.1 2 20 1094 1112 1094 1114 0.93

24 28 2.9e-06 0.00043 21.8 0.2 1 23 1140 1163 1140 1163 0.94

25 28 0.00077 0.11 14.2 0.9 1 23 1169 1191 1169 1191 0.96

26 28 0.0046 0.68 11.8 0.2 1 23 1197 1219 1197 1219 0.98

27 28 0.46 68 5.5 3.2 1 19 1225 1243 1225 1248 0.81

28 28 0.0016 0.24 13.2 3.3 1 20 1254 1273 1254 1277 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.0052	0.76	11.6	0.0	2	21	156	175	155	176	0.92
2	28	1.7	2.4e+02	3.7	0.4	3	23	184	204	183	204	0.94
3	28	0.29	43	6.1	0.4	2	23	210	232	209	232	0.92
4	28	0.00067	0.099	14.4	0.3	1	23	237	259	237	259	0.93
5	28	0.22	33	6.5	3.6	2	21	263	282	262	283	0.93
6	28	0.00034	0.05	15.3	2.0	2	23	327	349	326	349	0.95
7	28	0.14	20	7.1	2.4	1	23	382	404	382	404	0.98
8	28	0.00091	0.13	14.0	2.4	1	23	410	433	410	433	0.98
9	28	0.00047	0.069	14.9	0.1	1	23	442	465	442	465	0.97
10	28	8.8e-05	0.013	17.2	1.6	1	20	597	616	597	618	0.92
11	28	1.4	2.1e+02	3.9	0.5	2	23	623	644	623	644	0.92
12	28	0.19	28	6.7	3.1	3	23	651	672	650	672	0.92
13	28	0.16	23	6.9	2.8	1	23	677	698	677	698	0.88
14	28	0.15	22	7.0	5.8	1	21	701	721	701	722	0.93
15	28	0.00075	0.11	14.2	0.4	1	23	734	757	734	757	0.94
16	28	2.2e-05	0.0032	19.1	0.6	1	23	763	785	763	785	0.98
17	28	0.013	1.9	10.4	0.3	2	23	793	814	792	814	0.97
18	28	0.027	4	9.3	1.2	1	23	820	843	820	843	0.97
19	28	1.4e-05	0.002	19.7	0.6	1	23	851	874	851	874	0.96
20	28	9.2e-05	0.014	17.1	0.9	2	20	987	1005	986	1007	0.93
21	28	0.0028	0.41	12.5	0.1	3	23	1042	1063	1041	1063	0.98
22	28	4e-05	0.0059	18.3	3.9	1	23	1068	1090	1068	1090	0.97
23	28	0.069	10	8.1	3.1	2	20	1094	1112	1094	1114	0.93
24	28	2.9e-06	0.00043	21.8	0.2	1	23	1140	1163	1140	1163	0.94
25	28	0.00077	0.11	14.2	0.9	1	23	1169	1191	1169	1191	0.96
26	28	0.0046	0.68	11.8	0.2	1	23	1197	1219	1197	1219	0.98
27	28	0.46	68	5.5	3.2	1	19	1225	1243	1225	1248	0.81
28	28	0.0016	0.24	13.2	3.3	1	20	1254	1273	1254	1277	0.95

Sequence Information

Coding Sequence: ATGAGTCGCCAAGTGAATATAAAAGCATTAGTATCACACATAGTCAAAGGAGATGGCTTGGATCGATGTCGCATATGTATGGGAGAAACAACAGAAGGTCAAGTTTTCCTTAGCGATACTGTTTTGTTAGAAGAAAATAATCCTATTACTTTATCTGAACTGCTGCGGACAATCACCGGTATCGAGGTACCGCTGGAAGATGGCATGCCACCTGGTCTGTGTACACTCTGCAACAAGAACTTGAGCAAAGCCTGGAAAATACGCAATTTATTTATAGAAGCTACTAATAAATGGAACAATATTCTAACTTTATTATCTACGACACCATCCCCCAATGAATTACAAGGAAATCCTGATTCAATACAAATAATTTTAGCAGATACATATGTATCATTTGCTACAAACAAAGTAGttccaaaaaataaaaatattgttaaatatgaaaaagaaaGTGTATCTAAGCTTGAATGCCTTGACTGTGGGAAACAATTTATATATCCAAAATTGTTAGCTTTACATTTGGAACGCTCCACAGAACTTAAACGAGCGTGCCATGTATGTGGTGCTATTAGACATAGAGATGAGCTAGTTGTTCACTTGCAATCAGCTCACAACTTAAGGCCACTAATATGTAACAAATGTCATGCATTATTACCAAGTCCTAAAGAATTAAAGAAGCATGAAGCTAAGATACACAGTCTTGGTTCACACAGTTGTGTGGACTGTAGGCAGACTTTTAAATCACCATATGCACTAAATGCCCACGCAGGTGTGCATGCCTCAAAATCCTGCCCAGGATGTGATAAGCTCTTCAGAAATCATATGTGTTACATTCACCATGTCAAGCAGTGCTGTAAGTTAGACTTAACAGTAGAAAACACTCATGTtactaaaaacaaaattacaatagAAGTGAAAAACAGGAAAACAGATAAGAAAATTAAAGTAGGTCTGCGTGGAAGTGCATTTTCAGAGTGCTACTGTGATTATTGTAACAAAAAGTTTAGTGGAAAGAAATTCCTGGCTGCACACATCCTAAGAGCACATACTACCACAACTCATTCCCCATGTTTGTACTGCGGGAAGGTGTTGGCAGCGGTAAATATGCCAGGTCATATAAAAAAGCACACAAGGACAGAGATATTCCAGTGTGAGCACTGTTCATTAAAGCTCCGTACTAAATTAGGTTATCTACAGCATGTCAGGTTACATACAGGAGAACTGCCATACAAATGCCAACATTGTGATGAATCATTCTCAGGTTCAAGTAGAAGATCTGAACATATTCGTAAAGTTCATAAAAAGATTGAGCGGCCTTTGAAATATGAATGTAACCTTTGTCCTGCAAGATTTAACCTGCCTTACAAATTAAGAAACCATTTAAATGTAGCTCATGCTGACACGAGTGGTGACCATAAACAATTTGCTTGTGTTATATGCAAAGAGAAAGTAGGAAGTCTGCGTGGATTGATTGTTCAAGAACCGGGAATTCCTGAGGGATTATGTAATGTTTGCGCAGAAGAAACTGTCAAGGCACATCTGTTCAAACAACTCTGTACAGAGTCATTCAAACACTGGAACACAACTATTAACCATTTTACTAATCTAAACGAGCAAATCAACAGTGAAAAagctttttttgtattttataacattGAAGGAACTACGATTATCAAGGACCAAATAGTGAGCCCTAAAAATTCCAAAGAGGCAGTCGCAAGATTGAACCAAAAGGTCACTGAAAAGCGAAGAATTTTAAAGCCTAGATCGAAACATAAACCCGTCAAATGTAAGTGCCCTGACTGCGGAAGAAGATTTAATAATTATCATGACTTAAGTGCACATTTAGCTAAAAGTTCAAAGCGTGTGTGTGAAGAATGTGGCCTGATTGTCAGTAAACAGAAATTAATTCAGCATTTCAAAAAGAAACATGGACTATCATTTGCTATCTGCCATAAATGTTATCGTCAATTTGACGATGCGGCAGCCCTAGAAATACATCACACTGAATGTCACATGAAAGGCAAACATTCTTGCCACTTCTGCGGCGAAGAATTCAGCGATCGAGGTCTCAAAGCTCATTTGTACTCGCATTCGTTGTTCCATTGTGACAGTTGTCCAAAAAGCTTTAGTAACCGTAAGTGCTTCGAGTACCACAAAAAGTTATGCAAGACCACCCATGTGCCTAAACCAAGCCTCTTCATATGTAACGATTGCGGGAGTCAATATAACAGAAAGGTTTCGCTTCGCATTCATATAATCCAAAAGCATTTAAACGTCCTGCCTTACGTGTGTTCAGTGTGCGGCAAACGGGTTTCAACGATGGGACATTTACGGTCTCATCTTCAAGTTCATCAGGAGGTTCGGAAGGTACTGGAGTGCAAGTTTTGCGGAGCCAAAATGAGAACAGAGAATGGTCTGACATTGCACATGAGAATTCATACAGGAGAGAAGCCTTACAAGTGTTCAGAATGTGGTGAAGAATTTCTGTCGTCTTCTCGAAGAACTGATCATATAAAACGGAAGCACAGGAGTGTTTTTGATCAACCACACGAATGTCCAAACTGCCCTGCTCGTTTCATTAGACCATTTGAGTTGAGGAAACATATGAAAAATGTGCATTTTGAAGTTGCGAGACAAATTGAAGTAACAGAAGAGACTGATTATCCGGGAGGTTTATGCTCTGGCTGTGTCATGGCGTGCCAACAAGCGTTTGAATTGCGTCGATTAGTTTTAAAATCCCAAGCTACTTGGCATTCTGTTTTAAATGCTTTCGACAAACTTCCTACCCACTTATCTTCTAGTGCCAAATCTATATCGATAGTAATGCAAGGTCTGAATGTCAAAATTAACGAAAATTTTCATTCTAACCCAAAAACTACATTGAACGTGTTGAATTTAAATAAGCAGCGGCCGAGGGAAAGAAAATCTAGAGTACCAAGAAACGGCCCTAGTTGCAAATGCAAAGATTGTGGAAAAGCATTCTACAGTCCTTTCTACCTCAACGTTCATTTAGCTAATAGCTCGGATAAGGAAGCGTGTTTAAGTTGCGGCGAAATTCTCCAGAGAGGACAGGAGTTGAAGGATCATATGTTTGCAGCTCATGGAAAAGACACGGTACTATGCAATGAATGTCCCCTGTTATTCCCTGATTCCACCGAACTTATTAAACATAAGAAAACTGCTCACGTGTTAGGTATACATACTTGTAGTCATTGTGGCAGGACGTTTAAGAGAGTATCTTCGTTCGAGGCCCATGCCCAAATGCATGCAGTCAGAACATGTAGGACTTGTGGCACTCAATTCACAAATAGAAGCTGCTACAGAGAGCACAGATCGTATTGCGAGCCCGATGCTAAACCAAATACAAAACTTCTCCGAAGAGATTTACGTTCCAACATAAGAGATCCTGCTACGTATATTTGCGACTACTGTGGCAAAACGTACACATCCCGACCTCAGTTGAAAAACCATATAATTTGGATTCATATGGACGTACGGCCTTTCGAATGCCAGTGGTGCAAAAAAACTTTCTACACATCGGCAAGGCTAAAGGAGCATAGCATAGTCCATACTCGTGAGCGGAACTTTTCATGTGATATTTGCGGTGCGAAATTAGTGACGAAAATGGCGTTGGTATACCATAAAAGAAGGCATACAGGTGATAAGCCTTACAAATGTTCGGAATGTCAGGAGACCTTCATTTCGGCTTCGAGAAGATCAGAACACTGTAAGCGAAGACATGGTAAAGGTCGAATGTTCCAATGCACATATTGCCCGAATCATTTTGTTAGGAGTCACGAATTGAAGAAGCATGTGTGGAAGGTCCACAAAGTGATGTTCGTGAATGTCGATAAGAACAAAATTAATTCGAAACCTCCTGATATCTCCGTTTCTATAGTTTATCCAGCGACTAAAATGTGA
Protein Sequence: MSRQVNIKALVSHIVKGDGLDRCRICMGETTEGQVFLSDTVLLEENNPITLSELLRTITGIEVPLEDGMPPGLCTLCNKNLSKAWKIRNLFIEATNKWNNILTLLSTTPSPNELQGNPDSIQIILADTYVSFATNKVVPKNKNIVKYEKESVSKLECLDCGKQFIYPKLLALHLERSTELKRACHVCGAIRHRDELVVHLQSAHNLRPLICNKCHALLPSPKELKKHEAKIHSLGSHSCVDCRQTFKSPYALNAHAGVHASKSCPGCDKLFRNHMCYIHHVKQCCKLDLTVENTHVTKNKITIEVKNRKTDKKIKVGLRGSAFSECYCDYCNKKFSGKKFLAAHILRAHTTTTHSPCLYCGKVLAAVNMPGHIKKHTRTEIFQCEHCSLKLRTKLGYLQHVRLHTGELPYKCQHCDESFSGSSRRSEHIRKVHKKIERPLKYECNLCPARFNLPYKLRNHLNVAHADTSGDHKQFACVICKEKVGSLRGLIVQEPGIPEGLCNVCAEETVKAHLFKQLCTESFKHWNTTINHFTNLNEQINSEKAFFVFYNIEGTTIIKDQIVSPKNSKEAVARLNQKVTEKRRILKPRSKHKPVKCKCPDCGRRFNNYHDLSAHLAKSSKRVCEECGLIVSKQKLIQHFKKKHGLSFAICHKCYRQFDDAAALEIHHTECHMKGKHSCHFCGEEFSDRGLKAHLYSHSLFHCDSCPKSFSNRKCFEYHKKLCKTTHVPKPSLFICNDCGSQYNRKVSLRIHIIQKHLNVLPYVCSVCGKRVSTMGHLRSHLQVHQEVRKVLECKFCGAKMRTENGLTLHMRIHTGEKPYKCSECGEEFLSSSRRTDHIKRKHRSVFDQPHECPNCPARFIRPFELRKHMKNVHFEVARQIEVTEETDYPGGLCSGCVMACQQAFELRRLVLKSQATWHSVLNAFDKLPTHLSSSAKSISIVMQGLNVKINENFHSNPKTTLNVLNLNKQRPRERKSRVPRNGPSCKCKDCGKAFYSPFYLNVHLANSSDKEACLSCGEILQRGQELKDHMFAAHGKDTVLCNECPLLFPDSTELIKHKKTAHVLGIHTCSHCGRTFKRVSSFEAHAQMHAVRTCRTCGTQFTNRSCYREHRSYCEPDAKPNTKLLRRDLRSNIRDPATYICDYCGKTYTSRPQLKNHIIWIHMDVRPFECQWCKKTFYTSARLKEHSIVHTRERNFSCDICGAKLVTKMALVYHKRRHTGDKPYKCSECQETFISASRRSEHCKRRHGKGRMFQCTYCPNHFVRSHELKKHVWKVHKVMFVNVDKNKINSKPPDISVSIVYPATKM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -