Bsom036739.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bedellia somnulentella
Gene Symbol
ZBED5
Assembly
GCA_963576735.1
Location
OY755195.1:10266439-10269783[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.1e-08 1.5e-05 25.9 0.2 16 39 27 51 21 53 0.85

Sequence Information

Coding Sequence
ATGGTGTATAACTACAAAAGAAAAACTAACAGAGCTTCTTGGTCCGAGCATACCTTAAAGCAAGCTATCAATGAAGCCAAGAGAACCACCATAAACCAGGCTGCCTCTAAATATGGAATCTCATACAGTGTATTACAACGACGTATCAAGACAGGTTCCTGTATTAAAAGTCTTGGAAGGTTCAAACCTATATTTACGGAAGATGAAGAGTTGGAGCTGGTACAACACATCAAAAAACTAGATTCACTTTTCTTTGGGATCACTCCATCAGAGTTAAAAGAAATTGCAGGCGAATTTGCTAAACGCAACAATAAGCAAACACCATTCAAGAACAATGTTGCAGGCAAGCAGTGgtacaaaaactttatgcaaagaCACCCAGACATTGTACTAAGGAAACCAGAATCCACATCCATTGCACGGTTACAGGCATTTAATAGACCAGCTGTAAACAGGTTCTACGATTTATTAGAACGTACCCTAGAATTAGAAAATATTCGTCCGGATATGATTTTCAACATGGATGAAACTGGTGTTAGGACGTCATCCACACGACCTCCTAAAGTGCTGTCTGTGTATGGAAAAAAACAAGTAGGGGCTGTCAGCAGTTCAGAAAAAGGTACACTGACAACAGTTGTCTGCTGCTGCAGTGCCTCGGGTAATTTTGCTATACCTccatttttcattttcaaacgGAAAAGATTCCAAGCCCGATTGTTGGACGGTGCTCTTCCAGGGTCTGAAGCTTCTGTTTCGGATAGTGGTTGGATAAACGGAGATATATTCTTGGAGTGGCTCAGAGTTTTCGTAAGCCGTGTCAGACCAACTCCAGATTGCAAGGCTTTATTGATCCTGGACAACCACGAATCGCACATTCATTACCCAGCATTGGAGTACGCCACCAAAAATAACGTCATATTCTTGTCGATTCCACCCCACACGTCACACAAACTTCAACCCCTAGATGTGGCTGTGTATGCACCTTTCAAGACCTTTTTTGAAATGGAAATTATGAAATTTCAAAAGCAATACCCTGGAAGAGTTATTGGTCAGTACGATATTGCTAAACTAGTGACTCAAGCTTACTTGAAAGCAGCTACCCCACAAAATGCCCTAAGTGGTTTTAGAGCGTCAGGGATCCAACCATTTGACAGAGATATGATCGGGGAAGAATATTACGCACCATCTGATGTTTACGACCATGCACCACAACCGCAAGATCATGAAGATTGCCTTAACCTAGGGTTGGTATCTGAATCTGTTCCAGCAGATTTTTTTGCACAAGCAACCGAGTCCTCGGCAATACCACCGGCAGTGCCTTTCCTGATACCAGTCCCTCCAAGAAGCATCAGTTCTGATATAGCCCAGCAGCCCGAAGATGCAGAAATTGAGTCAATAGAAGTCTCGGGTGCTCCATCCGATGATCTCGAGAGAGTGACAGCGAGTGCAGCTACAGTATCAATATTTGGTACAATCAGTTCAGTTGAACGTGGAACCACTACACCACCACCAAAAGAGAGGCCTGAGAATAGGTCTATACTTGAAGAAGTCCATCCATTGCCAAAGAAAACTGTCAACAAAACTGCTAGGCGTAGACAACCAAAGAGATCTGAAATAACACACCGCTTAACCACACGAGCACACCGATTAAAACTatacaaaaagaaaaatttgagAAAAACACGGGGCGCCGTCCATGATATGGGCATCCGTTCTGGTTTTCAGGCACTCGTGAAACAAGTTGCTCCTCAAGTTTTTGGTTATCATTGCTTGATACACCGTAACGCTTTGGCTGTGAAAACGCTTCCACCAGATTTGCTACACACATTGAGTGACATAGTAAAAATTGTTAATCATATTCGAGGCAGCGCTACTAACTCAAGATTATTCAAAGTTTTGTGCGATGAAGTTAGAGAAGCTAGATTTAATGCTCTTTTGTACCATACAGAGATGGCGTACCTTGCTGATTTGTTCACTGAAATTAATAGTCTGAATATTTCATTGCAAGGAAATGACACGAACATTTTGACGTTGCAGGATAAAATCGCAAGTTTTTTGCGCAAATTGGAACTTTACCAACGTAGAGTCCAAGCTGGTGATGTGTCAATGTTTACACAACTAAGTGAGCAGTTGCAAGACAAAATCACGTTTGAAAATTCCGTGGTGCAACATTTAACTGCCGTGATAGACTCACTGCAGCAATATTTTCCGAACATGGACAGTCGTGAGTCGTACTACTGGATTTTAAGACCTTTTTCTACTTGCGTCGATATTTTCAAGGACGAAGATGTGTTAGCGAAAGTAGAGTTTCTCGGACTGCGGGAAAATAACTCATTAAAAGTAGATTTTCAAAATGATAAACTCAGCACATTTTGGCGAAAAGCTGCTGCAGAATACCCTATTAGAGCTGACAGAGCTTTAAAAATTTTGATTCCATTGCTACAAATTATAGATGTGAAAGTGGTTTCTCAAGTCTTGTTACATTAA
Protein Sequence
MVYNYKRKTNRASWSEHTLKQAINEAKRTTINQAASKYGISYSVLQRRIKTGSCIKSLGRFKPIFTEDEELELVQHIKKLDSLFFGITPSELKEIAGEFAKRNNKQTPFKNNVAGKQWYKNFMQRHPDIVLRKPESTSIARLQAFNRPAVNRFYDLLERTLELENIRPDMIFNMDETGVRTSSTRPPKVLSVYGKKQVGAVSSSEKGTLTTVVCCCSASGNFAIPPFFIFKRKRFQARLLDGALPGSEASVSDSGWINGDIFLEWLRVFVSRVRPTPDCKALLILDNHESHIHYPALEYATKNNVIFLSIPPHTSHKLQPLDVAVYAPFKTFFEMEIMKFQKQYPGRVIGQYDIAKLVTQAYLKAATPQNALSGFRASGIQPFDRDMIGEEYYAPSDVYDHAPQPQDHEDCLNLGLVSESVPADFFAQATESSAIPPAVPFLIPVPPRSISSDIAQQPEDAEIESIEVSGAPSDDLERVTASAATVSIFGTISSVERGTTTPPPKERPENRSILEEVHPLPKKTVNKTARRRQPKRSEITHRLTTRAHRLKLYKKKNLRKTRGAVHDMGIRSGFQALVKQVAPQVFGYHCLIHRNALAVKTLPPDLLHTLSDIVKIVNHIRGSATNSRLFKVLCDEVREARFNALLYHTEMAYLADLFTEINSLNISLQGNDTNILTLQDKIASFLRKLELYQRRVQAGDVSMFTQLSEQLQDKITFENSVVQHLTAVIDSLQQYFPNMDSRESYYWILRPFSTCVDIFKDEDVLAKVEFLGLRENNSLKVDFQNDKLSTFWRKAAAEYPIRADRALKILIPLLQIIDVKVVSQVLLH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-