Basic Information

Gene Symbol
Arid5b
Assembly
GCA_963576735.1
Location
OY755195.1:2328440-2347498[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.5e-13 1.5e-09 39.3 0.0 4 89 242 318 240 318 0.88

Sequence Information

Coding Sequence
ATGACAAAATGGCCGCGTACAATCGATATCGAGTACAACACTAAACGATATCGAAAGGTCCAGGACGAAGTCCTAGCAATAAGCGAGAAGGTAGTCCTAAAGGCGGTAGATCTGGTGAGCTGGGTGCACGACGGGGGCGGTTGGACTGTCGGCCTGCGAGCTTTATGGCATGGCGTTAAGGATTTACCTTGTGCGCCGCTACGGTGTCACAGGCTCGATTTTAGCGATGTGGATAAGGAGAAAATGGCTTTGCCGCCCCCTCCCGGGCAGTCGGTGACCGTGCTGTCGTACCCGCGCTACTGCCGCtaccgcgccgccgccgcgcgcTGTGGCGGGTCGGGGGGGGACGACCTGCTATTAGCTTTAGCAGGCTACATAGCTGTGCCGCCCAGGACACGGATATTGTATTGTCGGttaccattgggtGGCGGGGCCGGAGCAGGGAACGATCTATTACTAGCATTAGCCGGGTACATCGCTGTGCCGCCCGGGACACGGAGATTGTATCGTCGGGACACATTTGACTACCCCGAGCTAGAAACTTTAGAGCCAGTATGCAATCACCTATCGCCGCGGTTGGCGGGACGACCGCGCGGAAGACGGCGATTGCGGCGATCAAGGTCGAGAGATGATTGCGTTGAGACTCAGttCCCCAGCCGCCCCCGCAACGGCAAATCGAGCTCGGAGTCAGACAGCGAGTCACGTGACCGCGAGCTGGACCGCCGCTTCCTGCGAGACCTGCGCGCCTTCCACGCGTCTAGGAGTGAGGGGAGTGGGGGGCTAGATCAGGATAAGAATGTATCCCTACGCACCCTATTCTCCTGCGTTTGGTCGTTAGGAGGATATTCCGCGGTCTCAAGAAGAAGACAATGGGGAACTGTTCATCAGAAATGTGGAGGAGGCACCCGCCATGAGAGCAAGACTAGATACGAGAGATTCCTACTGGCCTATGAAAACCACAAGCGACGCCTCGAAAAGAAATCCCTAGAAAACGGCAAGAAGCAAAAAGCCTCAGAAAAACCCATCCCCACCATAGAACTGAACGACTCACCACTCCGGGACACCAAACCCACTCCCACACCAGAGAAAAGACTTAGAACCCCATCACCGAAACCAGAGAACGAAGAAATCATCGACAAACCAGCTTCTCAACTTAACCAAGAATTCCTCGACTCATTACAAGAAGATAAATCAAAATCAGTGATCAGTGTTAAACCGTTTGAACAATTATTAGACTCAAAGAcaataagtgatttaaaaaatagtgatattattAAGAAAATAGCTCAGGATAATAGTGCGTTAATAGCCGAGTTGGCTTCTAAGTATGATTTGAACGATTCGAATAAGATATTGCAAGAAATAGCGAATAAGAAAGGAGGGGATAGTATGTTCTTGACTGATTTGGCGCAGAAGTTGAAATTAGCTCCACCACCAATAAACGGTCGTGAAGCGAGTGAGGGAGGAGAGGTGAGGGTATCCGCGCGATCCTCACTGCGCTCCGTGAGGGTAAAACCGGCGAGGGAATCGCGAGCTGTCGTTCCCCCCCGCACCGATTCTGGTAGTTCCTCACCCCCCGTGTCGAGTTCTACAGCGAACAACTTCGGTATACGATATCCTCCGCAACTACATAACAGCCAGGTATCATCAACTAATAACCCGGACACCCACAGCGATGATGAAATAGTAGAAGTGCCGTACAAACCTAAGACTCCGGAAATAATCGACTTAGACGAATATCCGGAAAGTCCACAGACggtgaagaagaaaaaactGGATATCCTTAAAGAAAGAGGCTTAGAAGTCACCGCTGTCCCAAATACCACGTGGTCACCCCAACCCACGATCCCAAATATTGTCCCCAATCCCATACTGCTAAACCCGGCTATGCAACACCAAATAATGACCCAAGCACAGCTATTCCAAATGTACAATGTTGTCCCAAACTTCCCGAATGGGGTCCAACCACCAAGGGTCATTCAGGGCAAAAGCATTTTTGGCTCTTCGGGCCCAGAAAAAACTGTCTATGGAAACCCGAAAGACCCTTTCATGCCCCCACCTCATATTCTTCAAGGAACTCCTATAAAGCCTGCCAGAACTATACCTATACAACCTCCAGGCCAGGATATTCTTGATTTGACTTGCAAAACTGAGTCTCCCCAAAAGTTAGGTGTCGAAATCGTCAAAGTCCCAACGATATCTCCTAAACCGAATGCACCACAGAATCTAAGTAAAAACTATACCTTAGTAGATGGTAAGGCAGTCGTGGGATCCAATTTAGAGATAACCTTAGTCAGTCCTAAATCCCAAACTCCCCTTAAAAACAGAGCACCTCAAAAGAGGTCTTCGAACGGTCAATTCATGTCCGCTAAAACTCCAACACCTCCTAAAGAATACCATAAGTACCCTCATACGCCTCAAAATCCAAAAGAGAGGAAACCAAATTTAATAATACCAAACTATCAAATCCGAGATGACTCCCCTACGGGCTCGTCAAGCTCAAGAGATTCTCAACCAAGTATGCAAAATAATCTTCTAAATGCTTACAAAGGCCAAAATTTAGCACAGATCTTAGAAATGCAAGCCAAAACTCAAATGCCTTTAAGTCCATTCATGGATCCAGTGTATATGAGCGCTTTATATTCTAGTTTGGCTGGCCAAGTAGACCAAAGGCAACTAGCCATGTACAGGGATATGATGGCAGACCAATACAGAGGGTACACAGGCCTATTAAATATGGGAGTCACGACGCCTACAACAAAAAACTAA
Protein Sequence
MTKWPRTIDIEYNTKRYRKVQDEVLAISEKVVLKAVDLVSWVHDGGGWTVGLRALWHGVKDLPCAPLRCHRLDFSDVDKEKMALPPPPGQSVTVLSYPRYCRYRAAAARCGGSGGDDLLLALAGYIAVPPRTRILYCRLPLGGGAGAGNDLLLALAGYIAVPPGTRRLYRRDTFDYPELETLEPVCNHLSPRLAGRPRGRRRLRRSRSRDDCVETQFPSRPRNGKSSSESDSESRDRELDRRFLRDLRAFHASRSEGSGGLDQDKNVSLRTLFSCVWSLGGYSAVSRRRQWGTVHQKCGGGTRHESKTRYERFLLAYENHKRRLEKKSLENGKKQKASEKPIPTIELNDSPLRDTKPTPTPEKRLRTPSPKPENEEIIDKPASQLNQEFLDSLQEDKSKSVISVKPFEQLLDSKTISDLKNSDIIKKIAQDNSALIAELASKYDLNDSNKILQEIANKKGGDSMFLTDLAQKLKLAPPPINGREASEGGEVRVSARSSLRSVRVKPARESRAVVPPRTDSGSSSPPVSSSTANNFGIRYPPQLHNSQVSSTNNPDTHSDDEIVEVPYKPKTPEIIDLDEYPESPQTVKKKKLDILKERGLEVTAVPNTTWSPQPTIPNIVPNPILLNPAMQHQIMTQAQLFQMYNVVPNFPNGVQPPRVIQGKSIFGSSGPEKTVYGNPKDPFMPPPHILQGTPIKPARTIPIQPPGQDILDLTCKTESPQKLGVEIVKVPTISPKPNAPQNLSKNYTLVDGKAVVGSNLEITLVSPKSQTPLKNRAPQKRSSNGQFMSAKTPTPPKEYHKYPHTPQNPKERKPNLIIPNYQIRDDSPTGSSSSRDSQPSMQNNLLNAYKGQNLAQILEMQAKTQMPLSPFMDPVYMSALYSSLAGQVDQRQLAMYRDMMADQYRGYTGLLNMGVTTPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-