Bsom007865.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bedellia somnulentella
Gene Symbol
JARID2
Assembly
GCA_963576735.1
Location
OY755172.1:12108432-12118724[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.4e-18 1.2e-14 55.7 0.1 7 88 451 528 446 529 0.92

Sequence Information

Coding Sequence
ATGCAAACAGTTACATTTCCTGTGTTTTTTTCAGATACGTATCCAATATCAACATCTTTGTCACCAATTGTTTTAGTAGAAAAGCTCCAACAAGAAAATGTTGCTGATAAcaataaaagtaaaacaaaGCGAAAGTCTCAAAGTCGGACTCGAGATGCAAATATTGCTactaatataaaagaaaataaaattactaaagTCAATGATCATAAAGTAACTGATACGAAATTAAGTGATCTTAAAGTGAATGAAACTAAAGTAAATGATCCCAAAGCCAACGATCAAAAAAGGCACACTATGCTATCACGATCTATGGCTAAAAAGAGACCAGTAAATAAAGAGCCAGATGAAGTGCCTAAAATTAAAGCAGCACGAAGTAAATCTCCAGAATTTTCTACGGATGATGAAACACCTTTAAACCAGATGACACACACACCTGAACAGCATCATAATGGAAGGTTAGTAATTGACGAAGATGTCAGCTCTCCCGCAAAATATAGTGACGAAAATTCAACTAGAACTTCAGATAAATTTTATTACACACCAAATCAAATAGAAAAATGGATAGTCAACTCCTCAACAGATAAAGAAGAACATCTAGAAAAGGCAAACAAGAAGGCAGATAAAGAACTAGATATTGAAACCGAAAAAGAATTAGCACCATTATTGCTAAATAAACCTACAACTTCTGTCTATGATTCATGTCAaagtacaaaacaaaaaacgaaaGCATCTAAAAGTTCGGAGTATGTGCGAGATGTGTACCAATTTGATGAGACTGAAACTATTTCCGACCCAATTTTAAGGTATCAAGATGATGAATCGATTACACGAAAAAATTTGCGCCATGCTAATGAAGTTGCCAATAATAAAGAACCTAAGACTGAACAAGAGAATGAAGAGAAAATGGGTACATTTACTCAAAGATTCGTTGATCTTCTGACCCATTCTTCTCTCAGAGTTGAACTAGTAAATTGTACAGTAGATGGAAATACGATTGTTAAAGCTAAAATTGTACCCAAAACGAATGAAATAATTGACAAAAAGAATAAAGCAGATAAAGTTGATATAAATTCATCAGAAAAATctacaaaaaaatcaaaaacaaaGACTGAGGCGGCAAAAGTTCTAGTTGCGCCAGTATTTTACCCTACGAAAACAGAATTTGAGaacCCATTTGCATACATAAAAACTATCACTTCGGTTGCATCCAGTTACGGCATATGCAAAATAGTTCCGCCGAAAGGTTTCAATCCAGACTGCCACATTGAGGAAGACACCAGGTTTACTGTCACCAATCAATATCTAAACATGATGTTCCACCGTTGGGGACCTGCTGCTAAAGAGTTATGCGCTATCAAGACGTATTTAGCAACGCAGCAAATTAAATCCCAACGACTGCCATTGATTGACAGCGTAGAAGTTAATTTGACGAAGCTTTATAATATAGTCGAGCGAATGGGGGGCCTGAAAAAAGTAATCGAAAGTGACATGTGGTCGAATGTCGCTGATGAAATGAACTACCAAAAAGGAATGTTCGAAAGAAAACTGGATCAAGTCTACGTTAAATTTCTACTGCCCTACGCTACTCTTACAGCTCATGAGCGACAAATCATTTTATCGAGTGTAGAAAAGGGATGGCTCAAACGCTACCAAAGAATGCTAGACAGAGCCCAAAGGCCTCTTCACAAACAACGTCAAATGCTGGGTTTGTCCGACTGTGAGGATGAAGATGATGAAGACGAAGATGATGATGAGAACACGTTGGCCGAGACTGATGATTGTGTGGTCACTGGCCGGAATATGAACCTCACTACTTTTGAAAAGATAGCCCGCACTGTAAAACTGATGCACTTCGGTAGCCTAGGCCGGGAGCCTACGACGGAAGAAGTAGAAGCTGCCTATTGGCGAATAGTGCTGGAGGCAACCGAACATGTGTGTGTTAACAGCGCCGCTATCGATACAGGAGCCGCTGGTTATGGATTCtgccataaaaataataaaggggACCCCTATTCTAGACATCCGTGGAATCTTAAGACATTAAGTAGCTCCCCAGAATGTGCCTTACGCTCTCTAGGCCCAGTTCTGAGTGTGACCGTGCCCACCCTACATCTGGGCATGACGTTCTCGACCAGCTGCTGGCACCGAGATCCTCACGCGCTGCCCTGGATAGAGTACTTACATTCGGGACCACCCAAAATATGGTATGGAATACCAGACGAACAAAGTGATGTGTTCCGCAAAGCCGTGGAAGTACTCTGTCCAGCGTACTGCCAGAACAAACCTATCTGGCTACCCTCGGACATAACTATGATACCGCCGGAACTTCTGAGCAAACACAATGTCATGTTGACCAGAACCACTCAAAAACCTGGAGAATTCGTTATTATATTTCCTAAAGCTTACAGCTGTTCTATTTGCACTGGGTACACGATATCAGAGAGTGTGTACTATGCGCCCACGTCTTGGCTCAGCACTATACAACGAGAATTTCAGACTGTACGCGAAAGTTTCGAGCCAACAATGTTCTCATTAGAGCAACTAGTCCTTTCAATTGCGAACGACCCAAAAGCCTCACGTGAAGCCGTAACGATGGCGTCCCGAGCTCTCGAAGAAATCTTAAGCGAAGAGGTGTCTTTGAGAGAAGAACTCCAGAAGATTGGTATTAAAATGACGATCACAAGGCACCCGTTGAGGAAGAAGACAGAAACTTGGAATGTTCGTCAGCTGCACGAGTGTGATATATGTCGATCAACTCTTTATCTATCTGAGgTAAGTGGGCTAACAGACTTTAAAAGCTTGCATTGTTTGCGGCACGCCCAGCGAATGCTCACGTCCCCTGCGCTTCCGAAAACGCTGAAGACCGCTGAAAATAAGGAACGAACTACCCTCATTTGTTACTACACCGTTTCCTCACTGGAAATGATCCGCGCCAAGTTAAGAAAGCATCTTGATTCTGCTAACACTAATGTGGCTGCTGGAACTGAGTAA
Protein Sequence
MQTVTFPVFFSDTYPISTSLSPIVLVEKLQQENVADNNKSKTKRKSQSRTRDANIATNIKENKITKVNDHKVTDTKLSDLKVNETKVNDPKANDQKRHTMLSRSMAKKRPVNKEPDEVPKIKAARSKSPEFSTDDETPLNQMTHTPEQHHNGRLVIDEDVSSPAKYSDENSTRTSDKFYYTPNQIEKWIVNSSTDKEEHLEKANKKADKELDIETEKELAPLLLNKPTTSVYDSCQSTKQKTKASKSSEYVRDVYQFDETETISDPILRYQDDESITRKNLRHANEVANNKEPKTEQENEEKMGTFTQRFVDLLTHSSLRVELVNCTVDGNTIVKAKIVPKTNEIIDKKNKADKVDINSSEKSTKKSKTKTEAAKVLVAPVFYPTKTEFENPFAYIKTITSVASSYGICKIVPPKGFNPDCHIEEDTRFTVTNQYLNMMFHRWGPAAKELCAIKTYLATQQIKSQRLPLIDSVEVNLTKLYNIVERMGGLKKVIESDMWSNVADEMNYQKGMFERKLDQVYVKFLLPYATLTAHERQIILSSVEKGWLKRYQRMLDRAQRPLHKQRQMLGLSDCEDEDDEDEDDDENTLAETDDCVVTGRNMNLTTFEKIARTVKLMHFGSLGREPTTEEVEAAYWRIVLEATEHVCVNSAAIDTGAAGYGFCHKNNKGDPYSRHPWNLKTLSSSPECALRSLGPVLSVTVPTLHLGMTFSTSCWHRDPHALPWIEYLHSGPPKIWYGIPDEQSDVFRKAVEVLCPAYCQNKPIWLPSDITMIPPELLSKHNVMLTRTTQKPGEFVIIFPKAYSCSICTGYTISESVYYAPTSWLSTIQREFQTVRESFEPTMFSLEQLVLSIANDPKASREAVTMASRALEEILSEEVSLREELQKIGIKMTITRHPLRKKTETWNVRQLHECDICRSTLYLSEVSGLTDFKSLHCLRHAQRMLTSPALPKTLKTAENKERTTLICYYTVSSLEMIRAKLRKHLDSANTNVAAGTE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-