Bphi026063.1
Basic Information
- Insect
- Battus philenor
- Gene Symbol
- -
- Assembly
- GCA_028537555.1
- Location
- JAQMYT010000020.1:10730854-10753367[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.12 11 7.3 0.1 2 23 505 526 504 526 0.91 2 13 0.0068 0.65 11.1 0.1 1 23 536 559 536 559 0.95 3 13 0.022 2.1 9.5 2.5 1 21 795 815 795 816 0.93 4 13 0.029 2.8 9.2 3.8 2 23 880 901 879 901 0.95 5 13 1.1 1e+02 4.2 1.7 1 23 913 937 913 938 0.90 6 13 2.7e-05 0.0026 18.7 0.3 2 23 944 967 943 967 0.97 7 13 0.057 5.4 8.2 0.2 1 23 973 995 973 995 0.93 8 13 0.0018 0.17 13.0 3.3 1 23 1001 1023 1001 1023 0.98 9 13 0.21 20 6.4 0.0 2 19 1034 1051 1033 1053 0.89 10 13 0.084 8.1 7.7 0.1 1 23 1126 1148 1126 1148 0.96 11 13 1.7 1.6e+02 3.6 7.2 1 23 1155 1177 1155 1177 0.95 12 13 0.0011 0.11 13.6 1.8 1 23 1218 1241 1218 1241 0.95 13 13 0.0027 0.26 12.4 0.8 1 23 1248 1271 1248 1271 0.98
Sequence Information
- Coding Sequence
- ATGGAGCAACAACTACCGCCTTTAATGCTTTGCATGGAGAATGTGAATGGAGAAGAAGTAACACTTAGCATTGAACCTAATGATGATTTTCAAAGTTTTTTGGATAAAGCCAAAGCTACACTTGGTTTAGACGTTAATTTAAATTCCATAACTGGTGATCAACTGGTTTCATTAAACGAAAACATATACCATTATATATTAAATTCCGAATTGTACTTTCGAAACAACCCACAATTAAACAGCCAAAGTTTTGGTTCGACGGCAGAACAAGTAACACCTGGCTCAGATGGTTTTGTATACGTACTGGACGACGGCACACAGATACGGGCCTCTCAAATACAGTTCGATAATGAAGATCCACCCGTAGATTTGACAGCGGAAAAGATACCGTTTGTTAAATACGCGAATGACAGTGCTGACGAGAGTGAAAGTAAGGACTTAGATATTGAGGACACTAAAAAGATAAACATCGTCGAAAGTCCCGTCAAACGATGGACGAGCAGAAATTCCAGTCCTAAATGTAGCTTCGTCAACAGTTTACCCTTCAAACTTGTCTGTTCCAACACGTCTAATTTCGAAGCCCAATTTACAAAATATTTAGAATCGAACAATTCAAAAACTTACGCAACGTTAAACGCCGTTGCAAATAGAAATAGATCCCCTAGAAGTTTAATTAAAGATAATTACTCAAACTACGATGACAATTATCAGAACCAACGCTGCAAAGATGACTTTGCAAGTTTCACCCGTGAAGAGATTCTAAACATGTTTAAAGATTCTCCAGTTACATCCTTACCGTACGAGGAAAATCAGAGTTATAACGAGAAAAGGAGACATGTACGCAAAACTGATCCATCTAGACTTCATAAAAATTGGAATAATAGACCTTTACCCTATATAGATGTAAAACCGGGAGACAAATGTAGACAGAATTGTTTTATTTGCGGAAAAATTGATAACAACGTAGAAAAACTTTACTTGTTTGATAACGAAGACCAAAAGTTACACAGATGCACGTCGCCCAGAAAATACCCAACGCAACTTAAAATCATTTGTGACCATTGCTTGTCTGAAAATTTTAAACCTAGCCACATGAAAAGTCCCACCCAATCACTTAACTCCGATGAATACTTGGTTATTAAAAATAACCAACAGTTGATATTTCAAAAGGTAGTAGATTTCAAAGTAGCTGAAGTTACGGAAGTGAGTGATAAATTGGAATCCCAACACACTAAAGATACTCAAGAGAACGAGAAACTTGAATTCGTGAAGGTCGAAATAGGTTCAGACGGAGAAATTGTGACTAAATGTATAGACAACGACACCAGATTTTCTGATGATGTTGTCATTGTAAAAGACGAGAAGAAGGATAGTTCAAGTGACGTTGAAATAATTGAAAATGAACCTGATATCGATGATCATATAATAGATAATTTGGAAGAGGCCGATGAGGAAGTTAAAGAATTTTTAGGTATTTATCAGTCTGAAAACATCGACAAACTAAAAGAATTGAAATGCAGGTTTTGTGATCGCATCTTTGAGAATGTAAGTGAGGTAATAAATCACGGGGAAGAACATAAACATAGTTTAGATGATGGAGAAGTGTTCCCGTGTCCGCTATGCGATTATGGCTACGCTAATTTTAAATGGCTGAAAGGTCATCTGAAAGCAGCTCACGATAAGGCAAAGACAGAAACCGAAAAGGATGTTATTAATGAAGAAAATGACAAAGATGCTATTCCGACTTCTCCCTCCAAATCACCGGTAGCCAAGAGAACGAGAAGCGCAATAAGAAAAGTGGAAAACGAAAATGAAAAGGATTCAGACTTACCTTTTGTTAAAAAGGAACACCTGATCAGAAATCAGATTTGCAGAAGAACCACATATGGCAAGTCATTCGTGCAACCTAGGAAAGTTGGGACTGAAAGGTTTTCAAGTGGCGAATACGAACCAGTAAACGTGGCGTGGGTAGGCCTGCCAGTAGACGTGGCGATGGACTTCTGTGAGTTAACGCCTGATTCCATTAAAAAAAAAACAAATAACTGTGCGTCTGAAGTGGCAGTGAGCTGGGCATATCACCCGTACACCTTACTGCCGTGGGGAATGGAAGGTTCTTTGAGTGGCCACCACGAGAGGGTAGACGCGGCGTGGATAGCCCTCACTAATTGGACCGATGACTCAGTTGAGGTTGCAAGAAGTCGCAGGAACGAATCCACGTTGACCATCAAAACGGAGGTGAAGCAAGAGTGTCTTGACAGCAGCGACGACGAGGCGATATGGATCGTTCAGACCGTCGGGCACGAAGCAACAGAGCAGTTGGAGAATTTACTGAAGGTAGCTACGGGAAACGATGAAGTGAAAGACTCAAATATAAGAAAAAAACATAAATGTAACAATTGCAGCCAAATATTTCCTAATTCGGAAAGTCTGGTCTCTCATAAGTGCCGCCGACGTGGTAGAAAGCGACGAAGTCAGGGTAAAGAAGACTCGGTTATATGTGTTCCATCTGAAGAAGACTTCTTCAGGAGAGCACAAGGAAGGCCTAGACAAAAGCAAGAGACTGTGAACAATGATTTACTTGTGGTCAGACCCCGTAAGAGAAGAACCCGTGAACCGACCTCGGATCCTCAGATCGTGACCTGCCATAACTGCAATGAATCATTTACGTCTAAAGTACGACTCAAATTTCATATGCAATTCCACGATACTACGAACCTTCTCAAGTCCGATGGTCAATACGTGTGTCCAGAGTGCGAGGGCGCCCATTTTCCAACAGAGAGTGAACTCTTCGACCACGTCCACTTCCAACATCACAAGCAGAAGCGCTGGCAATGTCCGGTCGAGGACTGCGGGAAGACCTTCTATTTAAGGGCGACTTTGACGAAACACAGCCGGACACACACAGACACGCGCCGCTATGTGTGTGTGACGTGTGGTAAACGCTTCCTCGATAAGCAGACCCTTGATGAGCACGGAGTAACTCATCTGCAGATAAAGCCATTCCAGTGTCACATCTGCTTGAAACAATTGACACGCCGCTCCCGTCTGCGAATGCACCTACGCGCGCATGAGGAAGAACTGGCGCCAAGGCTGGTGCTGGTGTGTGCTGCCTGCGGAAGGGCCTTCAGGGACTCCAGTGATGCTGAGGAACATGCAGGCAAATCTAAGGAGTGCATAGAGCAACTGAATCCAGCTGTTAAAGAAGAGAACGAAATGTCGGTGCAGCTGTCCCCTACCAGCGGGCTCGTGACGCAGTCCGTCGCTGTCATTGCGAAATCTCCACAAGTTGACTGCGGACCGGAAGGCGAAGCCCTGCTGGCGACACTGACAGACTTCGCGAGGATCATCATCAGGGTCGTTGAGATAGAGAAGGCCTTCCGCTGCGAGTATTGCGAGGATGTTTTCTACTTGGAGGACGCGCTTAACAGTCACCGCGTCATACACAAAGGCGTGAAGAATCCATTTACCTGCCATATCTGCAAAGTGAGCTTCGCTACATATTCCAGGTGTACCACACATAAGACTACCCACGGTTTCTACAAGCGCTCCCTAGCGGACTGCAAGAAGTCCGCAAAGTGCCCCGGCACCTCGGAGGCTGGACCATCTGCCATCGGCATCCTGGGTTACGGAGGCTTTCCTGTTGTCAAACATTTTCTATGCGAGGACTGCGGGCGTTCGTACCTGCACTGGACATACCTGCAGGTGCATCGTCGCATGAAGCACGCCAACGAGAACTTCCTCTACAAGTGTAACCAGTGCGAGCTGACCTTTCCCAACAGTTGGAGTGTGGCGTACCACAGGAAAAAGATGCACGGTAAGAGCGGCCCGGAAGACGGAGGCGGAGCCACTAAGATCGCACGAGAGGATTACAAGTATATATTGCTGATTTGTTGTTTCTGCGTTCCTGAAGGTCGTATTTTCTCCAGAACGATTTAG
- Protein Sequence
- MEQQLPPLMLCMENVNGEEVTLSIEPNDDFQSFLDKAKATLGLDVNLNSITGDQLVSLNENIYHYILNSELYFRNNPQLNSQSFGSTAEQVTPGSDGFVYVLDDGTQIRASQIQFDNEDPPVDLTAEKIPFVKYANDSADESESKDLDIEDTKKINIVESPVKRWTSRNSSPKCSFVNSLPFKLVCSNTSNFEAQFTKYLESNNSKTYATLNAVANRNRSPRSLIKDNYSNYDDNYQNQRCKDDFASFTREEILNMFKDSPVTSLPYEENQSYNEKRRHVRKTDPSRLHKNWNNRPLPYIDVKPGDKCRQNCFICGKIDNNVEKLYLFDNEDQKLHRCTSPRKYPTQLKIICDHCLSENFKPSHMKSPTQSLNSDEYLVIKNNQQLIFQKVVDFKVAEVTEVSDKLESQHTKDTQENEKLEFVKVEIGSDGEIVTKCIDNDTRFSDDVVIVKDEKKDSSSDVEIIENEPDIDDHIIDNLEEADEEVKEFLGIYQSENIDKLKELKCRFCDRIFENVSEVINHGEEHKHSLDDGEVFPCPLCDYGYANFKWLKGHLKAAHDKAKTETEKDVINEENDKDAIPTSPSKSPVAKRTRSAIRKVENENEKDSDLPFVKKEHLIRNQICRRTTYGKSFVQPRKVGTERFSSGEYEPVNVAWVGLPVDVAMDFCELTPDSIKKKTNNCASEVAVSWAYHPYTLLPWGMEGSLSGHHERVDAAWIALTNWTDDSVEVARSRRNESTLTIKTEVKQECLDSSDDEAIWIVQTVGHEATEQLENLLKVATGNDEVKDSNIRKKHKCNNCSQIFPNSESLVSHKCRRRGRKRRSQGKEDSVICVPSEEDFFRRAQGRPRQKQETVNNDLLVVRPRKRRTREPTSDPQIVTCHNCNESFTSKVRLKFHMQFHDTTNLLKSDGQYVCPECEGAHFPTESELFDHVHFQHHKQKRWQCPVEDCGKTFYLRATLTKHSRTHTDTRRYVCVTCGKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHLRAHEEELAPRLVLVCAACGRAFRDSSDAEEHAGKSKECIEQLNPAVKEENEMSVQLSPTSGLVTQSVAVIAKSPQVDCGPEGEALLATLTDFARIIIRVVEIEKAFRCEYCEDVFYLEDALNSHRVIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLADCKKSAKCPGTSEAGPSAIGILGYGGFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFLYKCNQCELTFPNSWSVAYHRKKMHGKSGPEDGGGATKIAREDYKYILLICCFCVPEGRIFSRTI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -