Bphi014232.1
Basic Information
- Insect
- Battus philenor
- Gene Symbol
- -
- Assembly
- GCA_028537555.1
- Location
- JAQMYT010000005.1:13501772-13515446[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 3.1e-05 0.003 18.5 0.2 1 23 203 225 203 225 0.97 2 28 0.0013 0.12 13.4 0.6 2 20 255 273 254 275 0.93 3 28 0.52 50 5.2 0.3 1 20 335 355 335 357 0.92 4 28 0.29 28 6.0 3.6 1 23 369 392 369 392 0.96 5 28 0.0014 0.13 13.3 0.2 2 23 408 429 407 429 0.94 6 28 0.00016 0.015 16.3 1.3 2 23 459 481 458 481 0.94 7 28 0.0025 0.24 12.5 4.3 2 23 522 544 522 544 0.97 8 28 4.9e-05 0.0046 17.9 0.7 1 23 594 617 594 617 0.97 9 28 0.00084 0.081 14.0 0.6 1 23 668 690 668 690 0.97 10 28 0.014 1.3 10.2 5.6 2 23 702 723 701 723 0.96 11 28 0.21 20 6.5 0.2 2 23 735 756 734 756 0.95 12 28 0.55 53 5.1 4.7 1 23 766 788 766 789 0.95 13 28 0.0034 0.33 12.1 5.9 2 23 817 838 817 838 0.96 14 28 0.0028 0.27 12.3 2.5 1 23 849 871 849 871 0.98 15 28 0.0012 0.12 13.5 3.0 1 23 879 901 879 901 0.98 16 28 0.0036 0.34 12.0 0.2 2 23 921 943 920 943 0.97 17 28 2.3 2.2e+02 3.1 0.4 1 23 961 983 961 983 0.85 18 28 0.95 91 4.4 5.5 1 23 990 1012 990 1012 0.98 19 28 0.015 1.4 10.1 2.1 2 23 1023 1045 1022 1045 0.95 20 28 0.0025 0.24 12.5 0.2 2 23 1068 1089 1067 1089 0.95 21 28 1 95 4.3 0.5 2 20 1093 1111 1092 1112 0.91 22 28 0.0019 0.19 12.8 0.2 2 23 1170 1191 1169 1191 0.95 23 28 0.91 87 4.4 3.8 5 23 1201 1219 1198 1219 0.94 24 28 0.0026 0.24 12.5 1.0 2 23 1230 1252 1229 1252 0.95 25 28 1.1 1e+02 4.2 6.3 2 23 1269 1287 1269 1287 0.91 26 28 3.6 3.5e+02 2.5 2.4 2 23 1360 1381 1359 1381 0.93 27 28 0.00015 0.014 16.3 0.4 2 23 1392 1414 1391 1414 0.97 28 28 0.65 62 4.9 5.6 2 19 1452 1469 1451 1471 0.95
Sequence Information
- Coding Sequence
- ATGGCCCTCAAGCTCGGAAAATGTAGGCTCTGCCTTAAACTCGGAGATTTTTATTCCATCTTTACGATGGATAATAATCTCCAACTCGCCGAAATGGTGATGGAATGCGCTAGAGTAAAGGTATATGAAGGTGATGGATTGCCTGACAAGATTTGTTCGGAGTGCATTCAGAAACTTAGCAGTGCACATATATTTAAACAGCAGTGCGAGAGGTCAGATCAAGAACTGAGACGCAACTATGTGCCACCACCAGGTGTCAACTGCAAACCATCGTCGTCAAATAGACAGAGCAGTTACTCAGCATTCTCAAACCATACGGATACATCCACCATCAAGAAAGATACGCCGACGTCGTCAGTAACGAAAACATCACCAGGAACACGAAGCTGGAAACGTAGCCTGGACAGCAACGATAATGCCTCTATCAGCGGACGATCGCACGACTCTCGATACAGTTCCATCAAGCGAGTCGAGGAGCTTCGGACTTCCGAAAAACGGCCCAGGAGGTCGATTAACACGCCGTACACGGACTCTGACTACGACGACAGAAGTGTTTCGCAATTCTCCGCAGAAACCGATTCCGACGAGCTGGAGACGAAAGGCGAATTCAATTGCAATATCTGCGGCAAGGAGTTCGCTACTAAAAGGAGCGTGGCCGCCCACACCAAGGTCCATTCGAGGAAGTCGAAACAGAACCACTTTGCCAACATACCTGAGCCGGACAGTAGCATTCAGAACCCTATGGACGTGGACGACAAGCTCACATGCGACAAATGCAACAGGACATTCAAGTTGAAGATAATGCTGAAACGTCACCGGGAGGTTTGCGGAAGGGAACCGCACGAAAAGCAAAAAAAAGAATTGCACGTGTCACTGAAACCGATCGACAGCGGCGGCCACTCTACGAACATCGAGTGTGAACCTTGTACAACGTTTGAAACGGTAAACAAAGTCCACAATAGCGATAAAACTGAGCACAATGTAGAGAATGGTAAGCTCGCATTCCCATGCTACTACAAATGCGGCCAAATGTTTGACGAATACGGTCTTTACACCAAACACGTTGACAACTGCTCTAAAAAGGACAACACAAAAAACTTGTTTTTCACATGCCCGCTTTGTCTAAAACTTACGACCAAAAAGAGCGCATATTATAACCATATTAAACATAAACATAATGTTTGGCGCGATCTGAATAACGATAACTCTAAGCTGATCTCCGAATGTCGAATATGCGGTAAGCATTTGGCGTCACAGGACCAGCTCATCACACACCTTGCTGCACACATGTCCAACAAAGAAGATGAAGAGGAAAGTGGAGTTGAATCGATCGTGCCTGGCTACAGTACTCCTCAAGCAACTCAGGAGCCACTAAAATGTAAAGTGTGCGACAAACAGTTCTCGTATAGGAAATCTTTGATAAACCACGAGTTGAGCCAACATCCCACCACAGAAATAGAGATAAAACCGGAGCCACTGGAGAACAACACCAGCTGCAGTCTCCTCAGTGAATCGAACCGCCAGTCGGAATCAGAGTCTAGTCAGGAAGAGGGTGACGACAGGACGTGTGATATTTGCGAGAAGGAATTCTATTTCAAACGCCAGCTGCTACATCACAAGCGAACCAAGCACAACATGAGCTCGGGAACGAAGCGAGCCAAGATCGGCCTGAAGGATTGCTCGGTGCGTTGTCGCATCTGCGACATCGAGATGAAAGTGTGTGATATCAACGAGCACAACCTGATGCACAAGGCGGAGAATGTTAAACCCCGCAATTTGTACACTTGCGCGGAGTGCGGCGAAAAGTTTGAAAACTGCAAGTCACTCGCCACGCACATCAGGCTGGTGCACCGGTTGAAACAGCAGGTGCTGCCTGGGACAGCAGAGCTGGCGGATTTTTGTGAGGTCGTTGTTACGAAGACGGAACCGCTGGTGATGGACCAAGATGACAACGACCTTGAGAAGGCTCCGTCCTTGCAGGAACCTGTGGACCTTGGCGGCTTCATCTGCCCACTCTGCGGCAAGAAAATGCGGACGTTGAAGTCGCTCAAACAACACGTTAAATGGCACTCTAAAGATGATCAAAAACTTGAAAAGGATCTGGAGTGTTTTGTCTGCAAAGAAAAGTTCCGATTCCAGTGCCACTACCGCGTGCACATGCGCGGCCACTACACCGACACGAACCTGGACCCAGCGCTGCTGACGTGCGGGGCATGCGGTCGCCGGAGCAAGAACCTGCGCGCCGCCCGAGTACACATGAACTACCACAAGCAGACGCGCTTCAAAACCAACGATTACCACTGCTCTATATGCAACCGCGTCTATCAGCACAGGAAGGTGTACCTCGGGCATATGGCGATACATCACAAGCGCGGCGAAGGCGTCGATACAGTCATTGGTGCCGAGCCGCGCAACAATCCAGACGCACCCACCGCCGACGGCTCCAACACCTGCCACCACTGCGGCAAAGTCTGCGATTCCGAAGTATCTCTTAAACACCACATTATATGGCACAAATCTAAGACTTCCCTCTACGGAGCTCGACACGAGTGCCGGGTCTGTGGTATTAAATTCACCAACAAGAGAAGGCAAGAGCTCCACATCAGAACACATTACGAGGATGACAATGGCCCCTACAAGTGCCCCACATGTGGCAAGGGATTCACCAATGAGCTCTACCACAGGAAGCACATTAAAAGTCACAACTTCAACCATGAATCCCACAAGGCAAGAATTGCTAAACTCAGGAAAGACAAAGTGAAGTGTCCTATTTGTATCCGATTCTACCCTGATTTAGTAAAACTCATTCGTCACATGCGACGGACACATCCTGAAAGTAAAATGGTTAAGACTGACCCTGACGCACCAGCCCAGAACTATTTTTCTTGCAAACTGTGCGCCAAGGTATTCTTAGATGAACGAAGGCTTCAGTATCATGAGGAGGCTCACTTGAGGAAACCGGAGTTTTTCAAATGCAAGTTCTGTAGTAAAAAGACCATATCATTGAAAAACCACAGGATTCACATCAAGTCTCATTTATCCCAGAAGTATACTGAAGAGCCGCTCAAATGCATGCACTGTGAAGAAACCTTCGTAAGAGGTTACGACCTCCATTATCACTTACGCGACATACACGGAATTAACGAGACTTGGATAGCGGAATGCACGGAGAAGGTTCTTAAAGGCCCTTTGAAGGAATTACAGTGCTCTATCTGCCTTAAGGTATTAGCCAGTAAAGGGAACTTTGAAAGGCACCTTGATTACCACAATTCTCTGCGCTGTAATTACTGCTTTGAGTACTTCAACTCGCTCAGGTTCTTGGAAGGACATCTTACCTTCAGCTGTGAAAAGAAAAAACTAGTTGGCGAGACGGAGGTGTACCCTAAAAAATTGAAATGCCACAATTGTTACAAAGTGTTCCATTTACAAGTGAAATTGGACTGCCATTTGCGAACTCAGCATGGTATCAAAATCAGTAAGGAAGTAATTGAAAGACAGAGAGATATTGTTTGCGATTATTGTTTTAAGGTCTTTGAGAATGAATATGCTTTGAGCACACACAAAATATACCACCGCACGGTCAGTTATTATGGTTGCATCTATTGCAATAGAAAGTTCAACACTGTCACTATGTTTAATCGACATAAGAACCATCACTTTTCTCAACTTAATGTTGACAACCCTACAAAGTGTGAGCACTGCGACGAGACATTCGTCGCGTTCAGAGAGATGATTAGACACATGAAGGAAGTTCACAATGATGACAAGGACTGGATTGTTATGCCCAAAGAATCCAATGAGGAGAAGTGCCATATTTGTAATAAAAAATTCTATAATCTCCATAAACATTTAGCTTACCATGAAAATAACAAGTGCAGAAAGTGTTCAGAGTATTTCTTCTCTCAAATTGATTATGATAGTCATCTCTGTGCCATAGAGAGTGATGAAGAAGTGGACAGTAACAATGATATTGTATCACAACCTGTATATACAGAGTGCCCCTTTTGCTTTAAGCCCACAACCAAGAAGAACTCGCAGAAATTGCACAACCACATACACAAAATTTCCAGCTCCATCTCTTGTCGCTTCTGCTCGTTTAAATTTAAAACAATAGATGCATTCCACATCCACGCATTTTCCCACCGAAGTAAGAAATACGATAAGAAACCAATAAAATGTCGAAAGTGTGGTGAAAAGTTTGTGCGTTACGGTCCATTCATCAGACACATGCAGACAGTGCACAAGTCTAAACAGAAAATGCATTATCGGACCACGATAAAGGCGGAGCCGTGCGTAGTCTGCGGCGGCAACTTCCCCAATCTCCACAACCACTACAAAGCGCACCTGCTCAATCAGTGCAGGCAGTGTCACAAATATTTCACTTCATCTAGAGCTTTCTCCAGGCACAACTGCGACAAGGAAGACTCCGAGCCATCCAAAGTGTTCACTAGTGACGTCAATCTAGTCGCTCTAATTAATGCCTACACACCTACAGATGAGAAGGATGATCAGAAATACTATGGACACACTGATGATGAAGAGGAAAATAACGAGGATCAGACAAATGTTAACAACACTCCATACACAGTGCTGGATGACGAGAGTCAAAACTCAACAGATATTAATATGCACATGATGGTTCATACGCCAATCATATCTGATGTGCTGTCACTTTATGAAGCAAAGGAAGAAAATCCAGGCAAAGTTACCAACTTGACTGATGAGAACATAGATGGTGATAATGTCTCAACTGTCATCACAATTGATGATTGA
- Protein Sequence
- MALKLGKCRLCLKLGDFYSIFTMDNNLQLAEMVMECARVKVYEGDGLPDKICSECIQKLSSAHIFKQQCERSDQELRRNYVPPPGVNCKPSSSNRQSSYSAFSNHTDTSTIKKDTPTSSVTKTSPGTRSWKRSLDSNDNASISGRSHDSRYSSIKRVEELRTSEKRPRRSINTPYTDSDYDDRSVSQFSAETDSDELETKGEFNCNICGKEFATKRSVAAHTKVHSRKSKQNHFANIPEPDSSIQNPMDVDDKLTCDKCNRTFKLKIMLKRHREVCGREPHEKQKKELHVSLKPIDSGGHSTNIECEPCTTFETVNKVHNSDKTEHNVENGKLAFPCYYKCGQMFDEYGLYTKHVDNCSKKDNTKNLFFTCPLCLKLTTKKSAYYNHIKHKHNVWRDLNNDNSKLISECRICGKHLASQDQLITHLAAHMSNKEDEEESGVESIVPGYSTPQATQEPLKCKVCDKQFSYRKSLINHELSQHPTTEIEIKPEPLENNTSCSLLSESNRQSESESSQEEGDDRTCDICEKEFYFKRQLLHHKRTKHNMSSGTKRAKIGLKDCSVRCRICDIEMKVCDINEHNLMHKAENVKPRNLYTCAECGEKFENCKSLATHIRLVHRLKQQVLPGTAELADFCEVVVTKTEPLVMDQDDNDLEKAPSLQEPVDLGGFICPLCGKKMRTLKSLKQHVKWHSKDDQKLEKDLECFVCKEKFRFQCHYRVHMRGHYTDTNLDPALLTCGACGRRSKNLRAARVHMNYHKQTRFKTNDYHCSICNRVYQHRKVYLGHMAIHHKRGEGVDTVIGAEPRNNPDAPTADGSNTCHHCGKVCDSEVSLKHHIIWHKSKTSLYGARHECRVCGIKFTNKRRQELHIRTHYEDDNGPYKCPTCGKGFTNELYHRKHIKSHNFNHESHKARIAKLRKDKVKCPICIRFYPDLVKLIRHMRRTHPESKMVKTDPDAPAQNYFSCKLCAKVFLDERRLQYHEEAHLRKPEFFKCKFCSKKTISLKNHRIHIKSHLSQKYTEEPLKCMHCEETFVRGYDLHYHLRDIHGINETWIAECTEKVLKGPLKELQCSICLKVLASKGNFERHLDYHNSLRCNYCFEYFNSLRFLEGHLTFSCEKKKLVGETEVYPKKLKCHNCYKVFHLQVKLDCHLRTQHGIKISKEVIERQRDIVCDYCFKVFENEYALSTHKIYHRTVSYYGCIYCNRKFNTVTMFNRHKNHHFSQLNVDNPTKCEHCDETFVAFREMIRHMKEVHNDDKDWIVMPKESNEEKCHICNKKFYNLHKHLAYHENNKCRKCSEYFFSQIDYDSHLCAIESDEEVDSNNDIVSQPVYTECPFCFKPTTKKNSQKLHNHIHKISSSISCRFCSFKFKTIDAFHIHAFSHRSKKYDKKPIKCRKCGEKFVRYGPFIRHMQTVHKSKQKMHYRTTIKAEPCVVCGGNFPNLHNHYKAHLLNQCRQCHKYFTSSRAFSRHNCDKEDSEPSKVFTSDVNLVALINAYTPTDEKDDQKYYGHTDDEEENNEDQTNVNNTPYTVLDDESQNSTDINMHMMVHTPIISDVLSLYEAKEENPGKVTNLTDENIDGDNVSTVITIDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -