Basic Information

Insect: Battus philenor
Gene Symbol: -
Assembly: GCA_028537555.1
Location: JAQMYT010000016.1:12168181-12174213[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 3e-06 0.00028 21.7 1.7 1 23 264 286 264 286 0.98

2 9 2.8e-08 2.7e-06 28.1 1.6 3 23 294 314 292 314 0.98

3 9 9.6e-05 0.0092 17.0 0.3 1 23 320 342 320 342 0.98

4 9 1e-05 0.00099 20.0 1.7 1 23 348 370 348 370 0.99

5 9 2.1e-05 0.002 19.0 1.7 2 23 543 564 542 564 0.96

6 9 2.7e-09 2.6e-07 31.3 1.6 1 23 570 592 570 592 0.98

7 9 0.0023 0.22 12.6 0.6 3 23 600 620 598 620 0.97

8 9 6e-05 0.0057 17.6 1.5 1 23 626 648 626 648 0.99

9 9 0.018 1.8 9.8 0.8 1 23 654 678 654 678 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	3e-06	0.00028	21.7	1.7	1	23	264	286	264	286	0.98
2	9	2.8e-08	2.7e-06	28.1	1.6	3	23	294	314	292	314	0.98
3	9	9.6e-05	0.0092	17.0	0.3	1	23	320	342	320	342	0.98
4	9	1e-05	0.00099	20.0	1.7	1	23	348	370	348	370	0.99
5	9	2.1e-05	0.002	19.0	1.7	2	23	543	564	542	564	0.96
6	9	2.7e-09	2.6e-07	31.3	1.6	1	23	570	592	570	592	0.98
7	9	0.0023	0.22	12.6	0.6	3	23	600	620	598	620	0.97
8	9	6e-05	0.0057	17.6	1.5	1	23	626	648	626	648	0.99
9	9	0.018	1.8	9.8	0.8	1	23	654	678	654	678	0.95

Sequence Information

Coding Sequence: ATGACACCCCACATGTGGAGCCATCCGGCCGAGGATACAAGATTTAAGCCCGCACCGCGCGTCATTAAAACCTCGCTGTCAAGAAGAAATCACTTGGACGTGTTTCCTCTCGCATTATTTATCCAGAGGCACGATTATAAACACATGTTATTCGGCTATAAATCTTCATCTCACGATACGACAGCTCCCTATGTATTATATAAAGATGGAGTGGAACGAGCACCGCCAGGTACGCAGTGGGGCAGCGGTGTCCTCGATGGGGGCTACCAAACGATGCAGCATCAGAGCCCCAGCGGACCGTCGCCTCAGCCAGAACCTCAACTGGCTTCACCTGCGCCTTCGCCCTATCCTCCAGCGCCGCCACCCCCAGATCCCTCGGGCGCCGCGGAAGACGCAGCACAGCAGCTCGCACAGCAGCAAGCGCAGCAACAGGCCCAGCAGCAGGCGCAGCAGCAAACTTCCCCCGACCACATGCAGGTCGAACAACAGCTGCAGAACCAAGCCCAGTCACAAACCAACCAGGACCACTTGGACCGAGGACCGTGCTTCGTACAACCAGACTTACAACAGCAATACACCACCCCGTATTTCAAAGAAACCAGACCAACCAGCCATATGCTGGGCACCGGCGGATTTCCACTTCATTATCTGAAACAGAACGGCGGCGTGCTGTCGCTGGAGGGACCGCTAGATCAGTACGCAGCGCCGGACTTGCGCCACCTGCCCGATATTgttcaaccggagccgccgaaaccgaggaagcacaaccctaactcggagctgcggctgttcaaatgcctgacttgcgggaaggacttcaagcagaagtcgacgctgctgcagcacgagcgcatccacacggactctcggccgtacggctgcccggagtgcggcaagcgcttcaggcagcagtcgcacctcacgcagcacctgcgcatccacgcgaacgagaagccgtacgcgtgcgtgtactgcccgcgctccttccggcaacgcgccatcctcaaccagcacctgcgcatccattccggtgagaagccctatacgtgcggcgagtgcggcaaacatttccgccagaaggccatcctgaaccagcacgtccgcacacaccaaggcgagcgctattcacacatatatgccccgcccccccgcgcgccgcccgcgcccccggcccgcagcgCCGCGGGCGCGGGCGCCGCCGCCCTCGTTCGCTTCGGTCTCGCATCCATTGGCCTTCCTATCAGTCTGTCTGTCAAATTGTCGCCGCCCCGCCGGGCGCGTGCGGAGCGCTCGCGAGACGCGGAACCGATCGCCGGACGCTCCCACGTCTCGCCGCATCTCATATTCAAGAACGGGACCACGCCGACCCTCTGGCCGCAGGACGTACCGTTCCCTCCGGACGAAAACAAAGAAGAGATCCAGTCGACTTTCGGCGACGCCGACGGCCAGAACGGAGAGCAGAGGGGATCATGCTTCTCGCCGGGCGACACAGCGCAGTACCCCGCGTATTTCAAAGACACTAAAGGCCTTAATCACGCCGTGTTCGGATCCGGTCTCTCGTTGCAATACTTAAAAGGCGgtaagttacccgacgtgctcggcgggcgcgcaatgccgctgtacgtgcgctgcccgatctgtcagaaggaattcaagcagaagtcgacgctgctgcagcatggctgcatccacatagagtcgcggccgtatccgtgccccgagtgcggaaagcgcttccggcagcagtctcatctcacgcagcacttacgcatccataccaacgagaagccgtatggctgcgtctactgcccgcgcttcttccgacagagaacgatactcaaccagcacctgcgcatccacaccggcgaaaagccttacaaatgcacgcagtgcggcaaggacttcaggcagaaggcgatcctagatcagcacacgcgcacgcaccagggcgaccggccgttctgctgcccgatgcccaactgccgacggcgattcgctacggagccggaggtgaagaagcatatcgacaaccacatgaacccgcacgcggctaaggcgcggcgcgccgacgccaagacgccgcgcccgctgccgcccgccgccgccgtcgtcaagcccgagctgTACTTCCCGCAGTGCTACGCGCCGCCCTTCCAGCAGTTCGCCACCGGCGCCGAGTTCAAGCCGGCGGTGGGACCGGGCGCGCCCGTGGCCTGCCTGCCGGCACAGTGA
Protein Sequence: MTPHMWSHPAEDTRFKPAPRVIKTSLSRRNHLDVFPLALFIQRHDYKHMLFGYKSSSHDTTAPYVLYKDGVERAPPGTQWGSGVLDGGYQTMQHQSPSGPSPQPEPQLASPAPSPYPPAPPPPDPSGAAEDAAQQLAQQQAQQQAQQQAQQQTSPDHMQVEQQLQNQAQSQTNQDHLDRGPCFVQPDLQQQYTTPYFKETRPTSHMLGTGGFPLHYLKQNGGVLSLEGPLDQYAAPDLRHLPDIVQPEPPKPRKHNPNSELRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPYACVYCPRSFRQRAILNQHLRIHSGEKPYTCGECGKHFRQKAILNQHVRTHQGERYSHIYAPPPRAPPAPPARSAAGAGAAALVRFGLASIGLPISLSVKLSPPRRARAERSRDAEPIAGRSHVSPHLIFKNGTTPTLWPQDVPFPPDENKEEIQSTFGDADGQNGEQRGSCFSPGDTAQYPAYFKDTKGLNHAVFGSGLSLQYLKGGKLPDVLGGRAMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCVYCPRFFRQRTILNQHLRIHTGEKPYKCTQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHAAKARRADAKTPRPLPPAAAVVKPELYFPQCYAPPFQQFATGAEFKPAVGPGAPVACLPAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01078408;
90% Identity: iTF_01130195;
80% Identity: -