Basic Information

Gene Symbol
Trerf1
Assembly
GCA_028537555.1
Location
JAQMYT010000017.1:4898818-4910775[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.2e-08 1.4e-05 25.7 0.0 2 46 652 696 651 696 0.96

Sequence Information

Coding Sequence
ATGAACGACTGGATAACGCAACTCTTTCAACCGCAAACATTCACAAAGCCTAAGGCGCAGCAGGGAAGCCAAAAATGCGGGAGCGTTGCCAGTTCGAGCGGGATCACGAGCGGAGCGGGCGGCGGGACCAATGCCTCGGTTCCGCGACAGGCAGAAGTGAAACCAGTCGAATGTAATTTATGTCATCGAAAGTTTAAAAACATACCTGCCCTTAACGGTCACATGCGGCTACACGGTGGATACTTTAAAAAAGATTCTGACAATAAGAAGTTGGACAAAAAAGAATCGTCCGGACCACCCTTACAAACCGCTTCGGTGTCAGTGAGAGCGCTTATTGAAGAAAAAATTATTAGTCGTCGCGGAGGAACAATTTCATCAGCGCACACAGGTACAAGTACGGACATCATATCTTCCCGAGCGGGTTTTATAGCTCCTGCCCCACCGCCGTTGTCAACAATCCGATCATCAGTTGCTTCACCATCTTCACCAGTAACTACACAATTTATACCACCCCGTGCTCCATCCGTGGTGACAGTAGCCACAAATATCGCAAATAATCCGGCCATTAGAGATTCTACGCTTATTGAACTATTAAAGAAAGGCAGCTGCACTAAGGTTGTAAAACGATCTACTTCCGACCCTGGTCAGTCTTCGCCTGCCCATCAAGAATTCACATTTCGACCGGAATTATTCGGTGTCTCTTTTAATTCCGACGATGGATACTTTTCACCAGCCCTTAATACCGATGATACTTTTCAATTTACTACGACGCCCGAACAAATGGAAGAGTTTGCCTCATTAGAAAACTACGCGACTATCCGAGAACGGTCGCCAGTGACATTCCCGTCTAGTCGACGACTGGCTGCGGTTTTAAACTCACCTTTACCTGAATCCTTGGCAGACTTTGGAGCAAGTCACGGATGCTCACCTGTACCATCGCCTGGTATTGTTTACGCGGATAGTTCACCTTGTTTATCATACTCAACTGGCGATTCACCGGGATTAGCTTACAATGCAACATCACCAGGAGAAAACTATTCAACCCAGCCCGAAGCTTCCCCTGGTATTGCTTATCCGACACCACCAGCATCTCACGATGCTAATTCACCAGCGCATACAGTTCCACGAGCGTCATCACCTTTATCAGCAGCATTTTTTACAGCTACTATGTCCAGTCAGGAGGAGGTTGAAGAAGCGTTAGAAGAAGTGCTGCCGGAAGAATGCAGGTCGTTAGATGCTTATTCATTGGAATCGTCCCCGACACCTCGTCGCATTATGTTAAATTCGGAAGACCCTTTATTATCTAGTAGCCCGCGTGATTTTTCACACCACCGGCACTTTCGTCGTCAACAGCGTTTGGCCCTGTCTACTCCAATTCATCAATGGCAACATGACAATTCATTACAAGTGTGTGTTGAAGGTCGAGACGTAGTGCCTGCTGTATTTTTAAGTCCCAGCAGCGTGCCGGCTTCTCCACAGCGACGTAAAAGACGAGCTTCTCCCGCTGGGCCATACAGGACTCGCATGAGACGCTCGATTAATCACTATACCCCGCAACCTATACTGCCACCTGATAGAGATGGTTCGGGACTCTTGATTGAATTGATACATGGACACCCAAACTCCGAAAGCGAGGTAATGGCGCAGTATGGAGAACCCCGTCCACCACAAATAAATATTGGAATTGACTATCAAGCGAATATTCCAGAGCTCTGCAACGACCGCGTTGATTTACACAGAGCTCCGGAACAGTTACTCTGGGATCCAGGCATTAATGACGCTCTTGACGATAACGAAGTACGAATGTTCATGGAGTTGGCGATGTGTGCGGCTATGCCTGTTGGCGGTCACACGCGGGAGTTCGCTCTGCAAACTTTAGGAGAATGTGGAGGAGACATCAGAGCTGCCACGTTACGTCTCATGTCGAGGCCTGCTGCCCCGTCTCAACACGAGTCCCGTTGGACTCCAGACGAAGTTGAAGCTTTCTTAGCCGGCCTTGGGCATTATGATAAGGACTTTTACAGGATTTCCCAACTCATAAGAACAAAAGATTCGAAGCAATGTGTACAGTTCTACTACTTCTGGAAGAAAGTAACAAAAGACTACAAGTCACTGTATTTAAGAAGCTGGGGTATGGAACCGCAAGCCACGTCACAAGGTTCGATAGGACAGATTTCATTACAAGGCTCCACTTCGTGCTCTTCGCCGACATCGTACGACGGAGAAGAATATCCTTGCAAGATTTGCGGGAAAGTATTTAACAAAGTAAAAAGTCGTAGCGCGCACATGAAGTCACACCGGCCACTCGACGCCGAGCCAAAAAGGCCAAAACTCGAAAAGCCTTATGAAAAGGTCGAGAGACCCGATGACAGGGCTCACGCTACTGCTGAATACCAAAACAAACATCCACAGTAA
Protein Sequence
MNDWITQLFQPQTFTKPKAQQGSQKCGSVASSSGITSGAGGGTNASVPRQAEVKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDSDNKKLDKKESSGPPLQTASVSVRALIEEKIISRRGGTISSAHTGTSTDIISSRAGFIAPAPPPLSTIRSSVASPSSPVTTQFIPPRAPSVVTVATNIANNPAIRDSTLIELLKKGSCTKVVKRSTSDPGQSSPAHQEFTFRPELFGVSFNSDDGYFSPALNTDDTFQFTTTPEQMEEFASLENYATIRERSPVTFPSSRRLAAVLNSPLPESLADFGASHGCSPVPSPGIVYADSSPCLSYSTGDSPGLAYNATSPGENYSTQPEASPGIAYPTPPASHDANSPAHTVPRASSPLSAAFFTATMSSQEEVEEALEEVLPEECRSLDAYSLESSPTPRRIMLNSEDPLLSSSPRDFSHHRHFRRQQRLALSTPIHQWQHDNSLQVCVEGRDVVPAVFLSPSSVPASPQRRKRRASPAGPYRTRMRRSINHYTPQPILPPDRDGSGLLIELIHGHPNSESEVMAQYGEPRPPQINIGIDYQANIPELCNDRVDLHRAPEQLLWDPGINDALDDNEVRMFMELAMCAAMPVGGHTREFALQTLGECGGDIRAATLRLMSRPAAPSQHESRWTPDEVEAFLAGLGHYDKDFYRISQLIRTKDSKQCVQFYYFWKKVTKDYKSLYLRSWGMEPQATSQGSIGQISLQGSTSCSSPTSYDGEEYPCKICGKVFNKVKSRSAHMKSHRPLDAEPKRPKLEKPYEKVERPDDRAHATAEYQNKHPQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01403093;
90% Identity
iTF_00197760;
80% Identity
iTF_00197760;