Bphi018407.2
Basic Information
- Insect
- Battus philenor
- Gene Symbol
- -
- Assembly
- GCA_028537555.1
- Location
- JAQMYT010000016.1:631816-647703[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.5e-11 1.1e-07 32.0 0.0 2 39 301 339 300 343 0.88 2 4 9.8e-13 1.7e-09 37.8 0.1 2 39 355 392 354 395 0.94 3 4 8.6e-15 1.4e-11 44.4 0.0 2 45 410 454 409 454 0.96 4 4 5e-18 8.4e-15 54.8 0.0 1 42 461 503 461 505 0.95
Sequence Information
- Coding Sequence
- ATGAAAAGTCGTAGCAGTAAGTACGCCCGGCCGGTTCCCGTCGGAGAGGCGTTTGTTTTTATTTCTCCGAGGCGGGAAAAAAACGAGCGCTCTCCCGCCCTGCACCTCGTGCGCCCCGCGGCGTCGCAGACCTCGGTCGGATTCACTTTCGTCGACATCCCGCCTCTCGAAGGTCACGGAGGAGCGGCCGCGTGCGGGTGCTTACGACGGCGTCCGCTGACCGACTACGACGAGGTGAGTGACGGTAGCTTCGCGTCCTTCGCGTCGTCTTCGCGTGGAGCGCAGTCGCCCGGGCCACGTGTGCCGACGAGAGGGTTAACTTCGCTAACCCGCGCCGATACGCGCCAAACTCAGGAAATGTCCGGCGACGGACTGTTCCGAGTGAAATGCGAACCGCCATCGGACGGAGAAGACAGCGACTCACAATTCGCACCGAACTATCTGCCGACTCAGTTGGGTTCACCTGGTCTCCTGGCTGTCAAAGTGGAGACGATAGATCATTCTGATGAAGATGCAGCCTCGCACATCTTACGTCACCTGCAGGTCGGGAGCGAATTGGAGCTGACGCCGCCAGCACCTGCTGCACCAGCTGCAACGCCTGTGCACGCTCGCCGTCCACTACCGCCTCGCGCTTCGCCTGACAGCTTCGAAACCCTCGAGCCAGCCCGCTCCACCGCTACCACGTGTGAATCCAGTCTTGAACTTGTGCAGGGCGGAGCCCTACTGGACCGGCATTTGGGGCTGCTGAACTCGTCTGATGTGGAGTCGGACTTTGTCCCCCTACTGCCCATCAAGGACGAACCTCTCTCGGAAGGGGAGCAACAACAGCTAAGCGACGACGCGAGTGAGTGCGGCGTGGGGGAAGCGGCGGAGCCCCGCGGCAGTCCCAAGAGCTGGTCCCCGCGCGACATGGAGCGCGCGCTGCAGGCCCTGCGCGACCGTCGCATGAGTCTCACCAAGGCATCAGCGACTTATGGCATCCCGTCAACGACCCTGTGGCAGAGAGCACACCGCTTGGGAATTGATACTCCAAAAAAGGACGGTGGGGCGAAGACCTGGAGCGACGAGGACCTGCGAGCTGCCTTGCACGCCTTGCGCGCCGGCACCCTCTCAGCCAATAAAGCCAGCAAAGCTTACGGCATTCCCAGCAGCACGCTGTACAAGATCGCGCGACGCGAGGGCATCCGTCTGGCGGCGCCCTTCAACGCCGCGCCCACGGCTTGGCGCCGCGGCGACCTGCAGCGCGCGCTCGCAGCCATCCGCTGCGGCGCAGCCTCCGTGCAGCGTGCAGCCGCGCAGTTCGGCATCCCCACCGGAACCTTGTACGGACGCTGCAAGAGGGAAGGGATCGAGTTGTCGCGGTCCAACCCCACGCCGTGGTCGGAAGACGCTATGGGAGAGGCACTAGAGGCGGTCAGGGTGGGGCAGATGTCCATCAACCAGGCTGCGATTCATTTCAACCTACCCTACTCCTCACTGTACGGCAGGTTTAAGCGCTGCAAGTATCAAATGCAGGGCTTGCAGCCAAACCAACACGCGGAAGCGCAAAAACCACTGGAGATGGAACACCAGAGTCAATTGCACCAGGAGTCTCTACCTTACTATGGCTCGCTGCCAGTACAAGCGCCCGAAGACCGCATGGACTTGATACCTTACAGCCAGCTGTTGGGCGAAGTCCACGACGCAATGCACGGCCACGCCCTGCAAGAGTACTGCGGTCAGGGTTTCCACTACCCGCAGGGTTGTTACAGCGGTCTAGCCACCAGTTGA
- Protein Sequence
- MKSRSSKYARPVPVGEAFVFISPRREKNERSPALHLVRPAASQTSVGFTFVDIPPLEGHGGAAACGCLRRRPLTDYDEVSDGSFASFASSSRGAQSPGPRVPTRGLTSLTRADTRQTQEMSGDGLFRVKCEPPSDGEDSDSQFAPNYLPTQLGSPGLLAVKVETIDHSDEDAASHILRHLQVGSELELTPPAPAAPAATPVHARRPLPPRASPDSFETLEPARSTATTCESSLELVQGGALLDRHLGLLNSSDVESDFVPLLPIKDEPLSEGEQQQLSDDASECGVGEAAEPRGSPKSWSPRDMERALQALRDRRMSLTKASATYGIPSTTLWQRAHRLGIDTPKKDGGAKTWSDEDLRAALHALRAGTLSANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRGDLQRALAAIRCGAASVQRAAAQFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHFNLPYSSLYGRFKRCKYQMQGLQPNQHAEAQKPLEMEHQSQLHQESLPYYGSLPVQAPEDRMDLIPYSQLLGEVHDAMHGHALQEYCGQGFHYPQGCYSGLATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -