Bpel032798.1
Basic Information
- Insect
- Barypeithes pellucidus
- Gene Symbol
- -
- Assembly
- GCA_963991005.1
- Location
- OZ022563.1:6336699-6348014[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.04 3.6 9.6 0.9 1 23 1555 1577 1555 1577 0.97 2 10 0.033 3 9.8 3.1 1 23 1586 1608 1586 1608 0.97 3 10 0.00014 0.013 17.2 5.0 1 23 1617 1640 1617 1640 0.98 4 10 0.0043 0.39 12.6 0.8 1 23 1647 1669 1647 1669 0.98 5 10 0.58 52 5.9 5.8 1 23 1674 1697 1674 1697 0.94 6 10 0.65 58 5.7 1.4 1 23 1706 1729 1706 1729 0.93 7 10 0.00052 0.047 15.5 4.2 1 23 1769 1792 1769 1792 0.96 8 10 0.013 1.2 11.1 4.2 1 23 1801 1824 1801 1824 0.97 9 10 0.11 9.9 8.2 1.0 2 23 1830 1851 1829 1851 0.96 10 10 1.5 1.3e+02 4.6 0.2 2 23 1860 1882 1859 1882 0.94
Sequence Information
- Coding Sequence
- ATGGAGAAAGCTACCGCCGAACTGGACGGGACTATAGTTTTTAACTATATCGATGACGATGTTCAAATAATTGAGGCAGAGGAGCAACCTAGCAACGATCCTAAGTCAGACACAAGTTTCGATGAAAATCAAAATCCTAAAGAAAAGGTTGAAGATTCTGTTGTTGAGGAACTTATTAAACAAGATAAAGATTTAATAATTCTCTTGGAAAACGAagttttaagagcaataaaacTAGAACCTCCAGAAGAAAATATCAGTTCGCAGCCTCAAAATTCTACAAGAGATGTAGAGAAAAATGTTAGAAGAAAAAGAGCAAGATCTTCCGAGTCCACCAAGCCTCCTAAAACCAAGAAGCTTAAAATCTCTCTTAAAACCAAGGGCACcttagttaaaaagttgaaagaCCCTATAAGGAACAAGTTAGAAGATACTAAACCTAAGAGGGGTAGACCTAAAAAAGTAGTACCTCCAGTAAAAGGCAAAAAGACTACTATTCCTAAAATAAAGATTAAATTGAAGAAACATAAAACAATAAAGAAAGGCTTGAAAGTCAATAAAAAGGTAgtacctaaaataataattaaattaaaacatatttcaCCTAAACGAACCAGGAAAGGAATAATAGCCAAAAAGCAGTATGCTGTCATGAATACTAATGGTGCAGAAAGCTCCAAGCCCAAGAGAGGTAGACCAAAGAAACAAATAACCCCTGAAACAAAGGCtgaatccaaaaatattaataaacaaaatttgtGCATTAAGCAAGATGCTACTATAACCGTTAAGGATGTAACTATAGAAGAAGCTAAGAAAAGTAAATCTAAACATTTGATAACAAGTTATTTCGATTCTTCTCAAGCAACTGAATCTATAAAACTCAATATATCTAACAAGTTGATGAGCCGAGGCATGGAATTAAAACGAGAGAATGATTCAGTGAAAATTGCTGCATCTCGGCCTAGTAACATGAATGGATCAACTCTGGAAACTAAGCTAGGAAATTCCACTATAAGATCTGCAGATTTATTACCTCCTAAACCTAAAAGAGGTAGGCCTGTAGGTTCTGGAAGAAAGTCTGTTGACATTTCTTTGAAATCTGATGCTGTAATATGCTCTAAAGTAAAGGAATCTCAAAACACGGGCATAGATCAACAACGAACAGTTGCTTCTGCAGATATTACTAAGTTACTGCCTTCTGAAACCCTAGAAAGAACTTTAATAGATGGAAAACAGCCTGCTACTGTACAGACTAGAGGTGTATGGCCTTCAAAACCTAAGAATAGCAGATCTAACAGTTTAGAAGTAAAGAAAGCTGATGTTCCTATGCTGTCCAATGCAATAGAGTCTTCTACGAGTGGAGAATTAGAAAGCAGCATCTCGGAGCCAAAAAAGCTAGATGTCTTGGGGAATTTGACAGACTCACAGATTTCAATAATTAGTGAATTAATGATACAAGCCGAGCAACAAATTGCTATTATTGAAAATCCACCTAAAAAGGATAAAATTAAAGGATCTGGAAGAAAAAAGAGAGTTGTAAAGACTGTAGAACCAAATCAGTTAGAGGCTGTAGTAGATTTGACCAAGACACAGCCTTCTGAAATCATAATACCATGTTTACAAGCTGCTTCCATGGCTGATGCTAAAGGCAAGCAGATTCCCAAAACCACACAAATGAGGAATAAAAGGGAGAAGCAACAGACTTCTGCAGTAGGTGACTTAGCGCTTCTCCAAGCTAAGAACGATAGAGAGTCAAAAAGTCTGGAACCAGCTGCTTCTGTAGAGTCTAAAGATTTGAAGCTTCCTAACTCTATTAAAGGTAAACAAATAGCTTCAGGTCCAAAGAATGTGACTAAAACTGTAAAATTAAATCTTGTTCATCCTTTTGTGGCTGataaatccaaaaaattgaATACATCCTTAGATCTGACAACGCTGCAGCGTTCTAATTCTAAAAACACACGTCCTGGAACTGAACTACAAAGGCCTACTATGAAATCTAAGCCTAAACAAGGTAGACCAAAAAGTTTGGGATCAAAGGAAGTTGACGTTTCTGTAGTATCAAAGCCTGTCGAACCCTCTAATGCTGGAAGATTTGAGAGCAGTGATGTAGCAAAGCAATtggatgattctttaaatctGACCAACTCACAACTTTCTAGAAAAGAAGGAGGTAATTTAGAAGTTGGAAAAAATACGGCGCCTTCTAAACCTAAGCGAGGTAGACATAAATCCTTAGAGGCAAAGAAAGTGGGTACTTCTGTAGTATCCAAGCCTGATAAGTTCTTGGGAATTAGAGAACTCAACAACACGGGTATGGAATTGAAACAACAAGATGCTTTAGTAGATTTGACTCGGTCATTACCTTCGAACAGTAAAGAAGCGAGCTTACAAGTCCAACAACAAACTGCTCACAAGCAATCTATGCTATTACTTGCTAGACCTAAGGGTTTGGAAACGAAAAAACTAGGTTTTGTAGCACCAAAAGTGAATAAATGTGCCAACACAGCTATGTCATCAAGACATTTAGATGCTCTAATGAATTTCAGCAAGTTACAGCTTTCTAAGATCAGACAAACGAATTTAAAAGCTAAACAGCAAAATGAATCGGTAAAATCCAATGATCTACTACCTTCGAAACGTAAGAGAGGCAGGCccaaaggatttaaactaaaaaaacacatTCCAACTATCGATACTGAACTAAAAGCATCTCATTCTGGGAAGTCtgacattaatttaataaacagGCAGCTAAATTCCTCATTAGTAATTAATGATGTTGGCAAAGATTTAAATTCTTCTAAAACTTTAACATTGAAGGCTCTTGGCTTGGAAGCCAGGCAAGAAGCAATGTCCTCCCATTCCCTTTCCAGTAGAAGTTTAAGAGCTAAAGTTCTGACGCCTAAGAAACTTACTTTGCCCCATGCAGAAGCACCAAAAACTAAGAAGACACCTGTAGAAATGAAAACCGTAAACACTTCTGCCGAACAGAACGGCGTTGATCCAGATATAAAGCCAGATGTTATAAAGTTGACCAAGAaccttaaaacttctaaaaggcTTCCAAAATTGGTCGTTGCCGTAAGAAAAGTAAACGTAGGGCTTCCAAAACGTAAAAGAGGTAGACCTAAAAGTTCGCTAGCACAGAAAATCAATCCTCTATCTCTAATGGTGCGATTGGAGCCCCTAAAGCTGGAAGAAATTGAGTTTACAGACGCAGGGCCCAGTACTTCTGTAACAACCACATATTTAGGATCTGCCCATTCCAATATGATTAGAAAGAAAGCAAATATTGTAAATCAAGCTCATTTACCTAAATGTAAAGAAATTGCCATAAAAGGTACAGGAAGAACTACATATAAGAAAGTAAAAGATACAAATGTAGAAGCAATGCAGATTCACAAAGCTACACAAATGAGGAATAAAAGGGAGAAGCAAAAGACTTCCGCAGTGGGTGACTTAGCGCTTCTCCAAGCTAAGAAAGATAAAGAGTCAAAAAGTCTGGAACCAGCGAAAGATATTTTCTGTAATCCTGCACAAGGTTTAAAGCTGTCTAAACCTAAGGACACCAGTAATAAAAGTGTAAGGATGACCAAATCCCAGGAACCTGGTGGAATGGATTTAGGGGCTAAGAAGAATGATGGTATTATAGAAATTGTAGATCTACAGAGTCCCCCTGTCAGACATAAAAGCTTCAGGGCAAGGACAGTTAAAACTGTTGCGACGGCGCTTGAACCACAGCCTTCTACATCTACCGGAATTGTAGAGACTATAGATTTAGAGCTTGCTATCCCTAAGAATATTAACAAAATGGCAAATAGAAATTTAGATCCGGAAGTTAGTGGTAAAAGAAAGAGAAGAGACATCAGCTTTTGTGAGGGAAACAGAGACTTTATATTTCCTAAACCTAAGAGGATTTGTAAGAGAGTGTTTGCAACTAATGATAAGTCATCTAAACCTGAGGAAACTGTAGCTAAGACTGTAGAACAAAAACGAGACGATCCTGTTGGAAGTGAAGTTGTGGAGCCATCAAAACCTGAAGAAATATTGCCTAAAATTGAAGAACTGAAAGAAGGAGCATCCGTCGAAACTAAAGAAGAACCCTCTAAATTACTAGAAGCGGCAGTTCCAAGTGTACCAAAAAAAGTCATGTGTACTGTAGGGACGCAAACTATAGAAATTCCAGATGATGACGATATAAAAACCTTAGACACTAAATCGTCAGTCGATACAGTTGGAACTCAAATTTTAGAGTCTTCTAAACCTAAAGAAGATAAAGATAAGGATACTACCGAGTCTGCTCTGCCCAAAGCTGACAAGAATTCCGACACTGaggaaaaaactgaaaaagtTGATGAAGTAAAAACCGAAGAAGATGGTATAACTGCTACCGAAATCCAGCCGACAGTTACTATTAATCTGACTGAAGGGAATCAAGACCAGGGTGTCAAATTTGAAACCGTCGAACAGATTCATACAGAATTCAAGTACGAATCTCAAAGCGAACATGAAGACCTGCGGAGGAGGAGGGGCAAACTGGGAGGTCCCATGCGCGGAAGAAGGAGACGTCCCAAGGAGGAGCCGACGTCGATCAATAGTTTTGTCAGGATTATCGATTTGAACGGAAAGATACAATTAAAATGCTATAAACAAATCTACAAATGCGACCATTGCCTCTACGTCGGTAACTCCAAGGCGAACTTAGATCGACACAGCCTAGTCCATCGCAGTCCCGATGAAATTATTTGGTTCCAGTGTTCGGAATGCCCTTACAGATCGAAATACGAGCACCAGTTGAAGAGCCACTTCCTGATTCATCTCAAGCCGGAGCAGATTCACTTTTTCCAGTGTCCGCATTGCGAGGCGAAGTGTTCTAGGAAGCACAATTTAGCCAATCATATCAGGAGCATTCATTCGAGCAGGGAGTATACATTTAGATGTGCAGAATGTGACTACACGACCTTTTCCAAAGAACGTTTGGTGGCCCACTTAAGAAAACACTCGAAAGAAGTGCACGCGTGCACCCACTGCAAGTTCGTGACCAAAAGACTGGAATATTTAAGgtcccattttaaaattaagcatCTGCTGAACGCCCTACCGAGGCCGTTTCCATGCGACACGTGTTCTTATAAGGGAAAGACAAAGAGGGAGTTGGATAAGCACTTCGATAGGATGCATAACAAGGATAGGTTGCATGTATATCaATGTAACCATTGTGCGTTCAATTCAATTTACAAGAAAAACTTGGAGTTTCACCTGCTGCACATGCACAACAACTCGGAGGGTTTCCAAAAATTCATCTGCGGACATTGCCAGAAAACCTTTTCCTACAAGAACGGACTGAAAGTTCATATTATTCGTTGCCACTTACAACTACCCGACGAAGAATGGCACAAATGTCTTGAATGCAAATATAAATCGAAAGACGTTTCTACGCTAAAGAGGCACATAAAGAGAAACCACGGAGCCCCGAGACTGCACTGCAAGCTCTGTGGCTTCGCTACGAACAGACAGGTGTCCATGGATGCCCATGTGAAGACTCACGAGTAtgataatgaagatattttaaagTGTCCAGAATGTCCATATCGAATACTCCAAATGAGCTCCTTCCTCTACCACATGAAGGTGATCCATGGGAAACCAGTCACCTCCAAAGAAGCGGAACAGTATTACATGCAGGATGAATGTTGA
- Protein Sequence
- MEKATAELDGTIVFNYIDDDVQIIEAEEQPSNDPKSDTSFDENQNPKEKVEDSVVEELIKQDKDLIILLENEVLRAIKLEPPEENISSQPQNSTRDVEKNVRRKRARSSESTKPPKTKKLKISLKTKGTLVKKLKDPIRNKLEDTKPKRGRPKKVVPPVKGKKTTIPKIKIKLKKHKTIKKGLKVNKKVVPKIIIKLKHISPKRTRKGIIAKKQYAVMNTNGAESSKPKRGRPKKQITPETKAESKNINKQNLCIKQDATITVKDVTIEEAKKSKSKHLITSYFDSSQATESIKLNISNKLMSRGMELKRENDSVKIAASRPSNMNGSTLETKLGNSTIRSADLLPPKPKRGRPVGSGRKSVDISLKSDAVICSKVKESQNTGIDQQRTVASADITKLLPSETLERTLIDGKQPATVQTRGVWPSKPKNSRSNSLEVKKADVPMLSNAIESSTSGELESSISEPKKLDVLGNLTDSQISIISELMIQAEQQIAIIENPPKKDKIKGSGRKKRVVKTVEPNQLEAVVDLTKTQPSEIIIPCLQAASMADAKGKQIPKTTQMRNKREKQQTSAVGDLALLQAKNDRESKSLEPAASVESKDLKLPNSIKGKQIASGPKNVTKTVKLNLVHPFVADKSKKLNTSLDLTTLQRSNSKNTRPGTELQRPTMKSKPKQGRPKSLGSKEVDVSVVSKPVEPSNAGRFESSDVAKQLDDSLNLTNSQLSRKEGGNLEVGKNTAPSKPKRGRHKSLEAKKVGTSVVSKPDKFLGIRELNNTGMELKQQDALVDLTRSLPSNSKEASLQVQQQTAHKQSMLLLARPKGLETKKLGFVAPKVNKCANTAMSSRHLDALMNFSKLQLSKIRQTNLKAKQQNESVKSNDLLPSKRKRGRPKGFKLKKHIPTIDTELKASHSGKSDINLINRQLNSSLVINDVGKDLNSSKTLTLKALGLEARQEAMSSHSLSSRSLRAKVLTPKKLTLPHAEAPKTKKTPVEMKTVNTSAEQNGVDPDIKPDVIKLTKNLKTSKRLPKLVVAVRKVNVGLPKRKRGRPKSSLAQKINPLSLMVRLEPLKLEEIEFTDAGPSTSVTTTYLGSAHSNMIRKKANIVNQAHLPKCKEIAIKGTGRTTYKKVKDTNVEAMQIHKATQMRNKREKQKTSAVGDLALLQAKKDKESKSLEPAKDIFCNPAQGLKLSKPKDTSNKSVRMTKSQEPGGMDLGAKKNDGIIEIVDLQSPPVRHKSFRARTVKTVATALEPQPSTSTGIVETIDLELAIPKNINKMANRNLDPEVSGKRKRRDISFCEGNRDFIFPKPKRICKRVFATNDKSSKPEETVAKTVEQKRDDPVGSEVVEPSKPEEILPKIEELKEGASVETKEEPSKLLEAAVPSVPKKVMCTVGTQTIEIPDDDDIKTLDTKSSVDTVGTQILESSKPKEDKDKDTTESALPKADKNSDTEEKTEKVDEVKTEEDGITATEIQPTVTINLTEGNQDQGVKFETVEQIHTEFKYESQSEHEDLRRRRGKLGGPMRGRRRRPKEEPTSINSFVRIIDLNGKIQLKCYKQIYKCDHCLYVGNSKANLDRHSLVHRSPDEIIWFQCSECPYRSKYEHQLKSHFLIHLKPEQIHFFQCPHCEAKCSRKHNLANHIRSIHSSREYTFRCAECDYTTFSKERLVAHLRKHSKEVHACTHCKFVTKRLEYLRSHFKIKHLLNALPRPFPCDTCSYKGKTKRELDKHFDRMHNKDRLHVYQCNHCAFNSIYKKNLEFHLLHMHNNSEGFQKFICGHCQKTFSYKNGLKVHIIRCHLQLPDEEWHKCLECKYKSKDVSTLKRHIKRNHGAPRLHCKLCGFATNRQVSMDAHVKTHEYDNEDILKCPECPYRILQMSSFLYHMKVIHGKPVTSKEAEQYYMQDEC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -