Basic Information

Insect: Barypeithes pellucidus
Gene Symbol: -
Assembly: GCA_963991005.1
Location: OZ022564.1:15955136-15960024[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.9e-05 0.0017 20.0 0.8 1 23 80 102 80 102 0.98

2 14 0.0088 0.79 11.6 2.0 1 23 111 133 111 133 0.98

3 14 0.013 1.1 11.1 1.3 1 23 142 164 142 164 0.98

4 14 0.0003 0.027 16.2 1.0 2 23 174 196 173 196 0.96

5 14 0.0052 0.46 12.4 1.9 1 23 204 226 204 226 0.98

6 14 0.027 2.4 10.1 7.4 1 23 235 257 235 257 0.97

7 14 0.0023 0.21 13.5 0.9 1 23 266 288 266 288 0.97

8 14 0.0072 0.64 11.9 3.5 3 23 299 319 297 319 0.97

9 14 0.7 62 5.7 4.3 1 23 328 351 328 351 0.97

10 14 0.024 2.2 10.2 1.5 1 23 360 382 360 382 0.97

11 14 0.33 29 6.7 1.5 1 23 389 412 389 412 0.96

12 14 0.00052 0.047 15.5 1.2 1 23 420 442 420 442 0.99

13 14 0.18 16 7.5 1.7 1 23 451 473 451 473 0.94

14 14 0.012 1.1 11.2 1.3 1 23 482 505 482 505 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.9e-05	0.0017	20.0	0.8	1	23	80	102	80	102	0.98
2	14	0.0088	0.79	11.6	2.0	1	23	111	133	111	133	0.98
3	14	0.013	1.1	11.1	1.3	1	23	142	164	142	164	0.98
4	14	0.0003	0.027	16.2	1.0	2	23	174	196	173	196	0.96
5	14	0.0052	0.46	12.4	1.9	1	23	204	226	204	226	0.98
6	14	0.027	2.4	10.1	7.4	1	23	235	257	235	257	0.97
7	14	0.0023	0.21	13.5	0.9	1	23	266	288	266	288	0.97
8	14	0.0072	0.64	11.9	3.5	3	23	299	319	297	319	0.97
9	14	0.7	62	5.7	4.3	1	23	328	351	328	351	0.97
10	14	0.024	2.2	10.2	1.5	1	23	360	382	360	382	0.97
11	14	0.33	29	6.7	1.5	1	23	389	412	389	412	0.96
12	14	0.00052	0.047	15.5	1.2	1	23	420	442	420	442	0.99
13	14	0.18	16	7.5	1.7	1	23	451	473	451	473	0.94
14	14	0.012	1.1	11.2	1.3	1	23	482	505	482	505	0.97

Sequence Information

Coding Sequence: ATGTCCGAAATTGTTCTTGTGGAATGCAATATAAATGATGAAGAAATCGATGAAGGAATTCACGTTAAAGGAACCGACTTTGAACACAATCAATTCTCGTCATCCAATAATTTCAGAGAAAATAAAGATGAACTTTCTATTGTCTCCAAAGATCCAGATGTTCAGCAAGGAATACAGAGTCGCAATTCAAAGAGAGAACCAATTCAACGTAATCTCAAAAATGTAAAAGATAAAAAGTTTGAATGTAAATTATGTGGATATGAAACCAATCGTGCATATAGTTTAAAGATCCATCTTCGAAGACATATAAATCTGGACGACGTTAAAATCCATCAATGCGAAAAATGCGACTACCAGACTATTGGAGAACATGCGTTGAAAAAGCATTTGCTCGTACACGAGAACCCAGAAGATGCCAATATGTATAACTGTGCCGAATGCGTATATCAAACCAACACTAGAGTGAACTTTAGAAAGCATCTTCTTAGGCATAAGAGTTCCGGTGTAGTTAGCATGTTAAAATGCGATAAATGTAATTATGAAACCAAACGGAAAGATTCCTTAAGGATGCACGTTCTTACCATACATAATCCGGAAGATTGCGACATGTTTAAATGTGACTATTGCGAATATCAAACATATCGTGGAGACAACTTAAAGATACATCTCTTCAAGCATAAAGATCCAGAGGGCGCTAATATGTTTAAATGTCATCAATGTCCCTATAAAACCTTTCAGAAACGATTGCTATGCAGTCATCTCCTCACGCACAAGAACCCGAAAGACGCAACTATGTTTAAATGCAACTTATGCGACTATCAAGccaaaaagaaatattatttagcGAGGCATGCCCTCGTACATAAAGTTCCTGAAGATTGTTCTACGTATGGTTGTTATCACTGTGAATATCGAACCAATCAAAAACGCAGCTTACAGCGACATCTCTTGAGACATAAAAATCCAAATGAACTTAATATGTACAAATGTATACATTGTGATTATCAGAGTAATCAGGAATTTTCCGTTAAGAAGCATCTCCGCCGTCGTCATAGGAACCCAGGGAAAGAAGCTATGTTTAAATGTTCTCAGTGTGACTTTGAAACGTTCGAACAAAATTATTTGACAAATCACTTATCAGTACATATGACCCCGCAAGATATGTTTAAATGCACCTTATGTTCTTTTCAAACGAAATGGAAAAGAAGTTTAAAGAATCATCTCCTCGTTGTGCATAATCCGGAAAATCGTGACATGTATAAATGTAGTCTCTGTGAATATCAAACAAGTCGTAAGCCGTCTTTAAAAATACACCTGCTAAAGCACAAGGATCCAGAGCACGTCgatatatttaaatgtaatcaATGTCCCTATCAAACGTTTCAGAAATATCGTTTAGACAATCATCTTGTCTTACATAAGGACCCGAAAGATGTAATTATGTTTAAATGCAACTTATGTGATTATGAAGCAAAGAGGCAATCTTACATAAGTACGCATGTTAACCGTCGTCATAAAAAGCCAGAAAGAGAAGCCATATGA
Protein Sequence: MSEIVLVECNINDEEIDEGIHVKGTDFEHNQFSSSNNFRENKDELSIVSKDPDVQQGIQSRNSKREPIQRNLKNVKDKKFECKLCGYETNRAYSLKIHLRRHINLDDVKIHQCEKCDYQTIGEHALKKHLLVHENPEDANMYNCAECVYQTNTRVNFRKHLLRHKSSGVVSMLKCDKCNYETKRKDSLRMHVLTIHNPEDCDMFKCDYCEYQTYRGDNLKIHLFKHKDPEGANMFKCHQCPYKTFQKRLLCSHLLTHKNPKDATMFKCNLCDYQAKKKYYLARHALVHKVPEDCSTYGCYHCEYRTNQKRSLQRHLLRHKNPNELNMYKCIHCDYQSNQEFSVKKHLRRRHRNPGKEAMFKCSQCDFETFEQNYLTNHLSVHMTPQDMFKCTLCSFQTKWKRSLKNHLLVVHNPENRDMYKCSLCEYQTSRKPSLKIHLLKHKDPEHVDIFKCNQCPYQTFQKYRLDNHLVLHKDPKDVIMFKCNLCDYEAKRQSYISTHVNRRHKKPEREAI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -