Bpel001484.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Barypeithes pellucidus
Gene Symbol
ZNF236
Assembly
GCA_963991005.1
Location
OZ022556.1:2943728-2970071[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.021 1.9 10.4 3.0 1 23 166 188 166 188 0.98
2 25 0.016 1.4 10.8 0.3 1 23 194 217 194 217 0.96
3 25 0.00014 0.012 17.3 0.3 2 23 224 245 223 245 0.97
4 25 0.0052 0.46 12.4 0.4 1 23 251 273 251 273 0.98
5 25 0.003 0.27 13.1 0.2 2 23 287 308 286 308 0.96
6 25 0.0014 0.12 14.2 5.9 1 23 332 354 332 354 0.99
7 25 2.3e-05 0.0021 19.7 0.4 1 23 360 382 360 382 0.96
8 25 4.2e-05 0.0037 18.9 0.5 1 23 388 411 388 411 0.97
9 25 0.018 1.6 10.6 1.1 1 23 421 444 421 444 0.97
10 25 0.00096 0.086 14.7 3.2 1 23 526 548 526 548 0.98
11 25 0.00014 0.013 17.3 2.3 1 23 554 576 554 576 0.99
12 25 0.03 2.7 9.9 1.4 2 23 582 603 581 603 0.96
13 25 6.2e-05 0.0055 18.4 2.2 1 23 683 705 683 705 0.97
14 25 0.00018 0.016 16.9 1.8 1 23 711 733 711 733 0.98
15 25 3.5e-06 0.00031 22.3 0.3 1 23 739 761 739 761 0.97
16 25 0.11 9.5 8.2 5.0 1 23 767 790 767 790 0.95
17 25 5.1 4.5e+02 2.9 1.3 5 20 1054 1069 1051 1071 0.87
18 25 4.5 4e+02 3.1 0.8 3 23 1180 1201 1178 1201 0.95
19 25 3.1e-05 0.0028 19.3 1.6 2 23 1208 1229 1207 1229 0.97
20 25 1e-05 0.00089 20.9 4.2 1 23 1235 1257 1235 1257 0.99
21 25 0.00042 0.038 15.8 2.0 3 23 1267 1287 1265 1287 0.95
22 25 1 92 5.1 2.3 1 23 1293 1316 1293 1316 0.87
23 25 0.0012 0.11 14.3 1.2 2 23 1488 1510 1487 1510 0.95
24 25 0.028 2.5 10.1 0.1 1 23 1516 1539 1516 1539 0.91
25 25 0.0026 0.24 13.3 0.5 1 23 1545 1568 1545 1568 0.97

Sequence Information

Coding Sequence
ATGGATAGCTTAAATATTATTCCAGAAAGTTACGAGCTTCAAGGCAATGTTCACAACGACTTGCCGATGAATATAACATTTATTAACGACCTCGATAGCAGTTCTGTTTCCGTACAAAATTATGTTATTAAACATTTGGATGATGGTAATTTGGAACTGGTGTTTTGTAACAATCAGGATCCAAATGAAGAGAGGCCAGAACTGCAGGATATAATAGATGCCCCCTCTGAttatatttcacaacaaaatgaAACTGTAGAGTTGAATTTAAACTTGAATACAAGAGTGAAACCTAATACGATCGAGTCAAGATGTGTAGAGGTACCTGTTATTAGaaactTTCAAAAAGACTCGGTTATTCAGCATGCCTCGGCAATCCCCCAGCTGCCTAAACCCCCTCAAACTACAACAAAAGCGACGACGCCGTCTAAGAATTCAAGTAACCTAATCCCTATTATGTCCATACCCGAGAGGATCTTGTTGAACATCACGATTTATTCCTGTTTCAAATGCAAGGAGCAGTTCAACAGTCTTACGTTGTTTCGGCAACATCTGAAATGGCACAAGGCAGACAAGAACTTCAACTGCTCGAAATGCACGGCGGGTTTCAACGCGGAGAACAATCTGAAAATCCACATGGTGACCAGTCACCCGGGTCACCACACCGACGTCTGTCCCATATGCAGGATCAAGTTTCAGCGGAAGGCCAGTCTGAAGTCACACATCATGATGCATCAAGTGGAGGAGTTCTTTACTTGCGAGGAGTGCCACGGAGAGTTCCAGAATGACGATGAATTATTGAAGCACATGGAAATCCATGCCATTACCAGGGTGACCAAAACATTGTCCGATTCCCTCGTTTGTCCTTACTGCAAGCTAGATTTTGAAACATTGGCGGAATATAAACGACACGTTGAAAAACACGTCGACGTAAAAAGAAATATTCTGAAGggaaaaaagatgagaaagaaaaaaaaagaaaaaccggGAGGATACAAGTGTAAATATTGCtcgaaatttttttcaaaaagttgcTTGTTGGATAGGCACGAAAGGATACACACTGGAGAGAGGCCGTATGCGTGCACATACTGTAACAGAGCTTTTTCTCAGAAAGGTACACTACAGATTCACCTTGGAAGCCATACAGGAGTGAAACCGTACTCTTGCACCTTATGTGAGGCTAAGTTTACCCAAAAAGGAAATCTTCGAGCGCACATCGAAAAAACCCACACGGCCCCGAAAGGCAATCAAAAGATATACAGGTGCACGCAGTGCCCGTGCATTTTCCGGAAAGTCGCCAGCTTGAACGGTCACATAACCAAAGTGCATATTCATCAGGACGCGGAAGAAACGGAATCGGAAAACATTATCGACAAGGTGATGGGCAGTCTGAAGTTGTTGAACAGCGGACTGGGGAAGTCCGTCTCGAAAGGGGACCAGCTGAAAACGCAAGCGCCTCCGTCCCCGCCAAAAACCGCCGGAACGAGTTCCGTCAGGGTGGCCGAATCTCTGGCGAACGGCGGGATACGGCGCTACCTGGTCCGACAGAAAAAAATCGGCGACGTCCGGTGGTATTTCTGCAACTTTTGCTCCAGTCGATTCAAGAAGCCTTCCGATTTGATCAGGCATTTTAGGACTCACACCTTAGAAAAACCTTACCAGTGCACCAAATGCAAACAAGCCTTCTCCCTGAAGTCCACCCTGCTGAACCATTACAAGGTACACTTCAGTACGGCGTGCCAGTGCTCTCGTTGTGATATTAGAATAAGGAACCCGAGGACGTTGGACGCGCACCTCAGAAGTCACGATACGGAGGTCAGAACGCCGAATTATGTGTGCTTGTTGTGCGAGGATGTGTTCTTTACGATGGAGGAAGGGAAACGGCATAGGTCGGTGCACGACGGTGAAATCCAGTCTACTCAGAATATTATTGAGCCGATTTTGAAACAGCCGTTGTATGAAACCACTTATGgttctTTACCATTGAAACCACCGAAATCCAAAATCCCCAATACCGGCGCGGAGTCGTCGCTGGAGAGGCCTCACCAGTGCAAAGGATGTGGGGCGAGGTTTTCTAGATTGATGAGCTTAAAAAGGCACTTGCTATATCACTCGGGAGAGAGGAAATTCAAATGCGCTTTATGTCCGAAGGCTTTTACAACAAAATACCGACTAAAGGAACATACAAATTATCACAAGAACATCAGGAACTATCCGTGTGCGACGTGCGGCAAGAAGTTTGTGACGTCGTCCTTGCTGAAGCGCCATACCATCGTGCATAATAATTTCAAGCCCTATTTGTGTCCGTACTGTAACAAGCACTTTAAGACGCTGCTGTTGTGCAGATCTCATATAAAGACCGTTCACAAGTTGAAGGTGTACTTAGAAAACGGAGAGgaAGGACCTGAGGATACCGAATTAATGACTAATGGCTTATCGGACAACACAGATCACACCATGTTTAGCCACAGTGGCAAAAATACAAAAGAGGATACTTTTCAGTCAAAATCGCACAGGACTCCAGCGGAATCTACTGCGGTACACACATCGCAAAGTTCCGTAATGTTGAGCGTCGCTCCTCATGAAAATCAACAGGAATCAGATCCGGATTATCAGATGGTTTATCTAAATATCGACGACTTACCTTTGAATAACCCAGATGGTGTTTTAGGTGGCAATTCTCTTAAAATACAGAACGATTCCCTTTTATTTAACGAGCTCCGAGACTCGGAGGCTCTGTTCAACATCGAACCTAACAAATCCTACATGGTGGATCCAAACGAAGTGATCCAATCCACTACCATATCGGGTTACACGACGTCTTCCGTAATCAGTAAGGTATCGCAAAATACGACAAATGTGGGAAAGCTCGGCGATATGGCAACTAGGCGCCGTGGAGAATTGGATAGATGCGGCAACGGTGGACACGGTCTAGGGAAAGACCACGCAGATATGTCTTCTATGGCGGGGATGGGCGATTTAGCGACTGGGCGGCCAGAAATAGGTTTGCAGGAGTTCTCGGCTATGGACCTGGGTGGATTGCCTTTGAGCATTATTGAAACTGAagACACGGACACGTTATCAACCAGTATGGCCAACGAGGAGATGAACATCAATCCGAACGACATGTTCTACGATGCACAGGTCATCTGCATCAACTGTCACAAAGTATTTTCCGACATGAACGTGTTCCAGAAGCACGCCTGTTCGCAGGATCCCGATGCGACCGCAACGGACGATCTAAATTTGCTAATACAAAACAATGACGGGGAAAACGGGCATAATAATGAAGTGTATAGTTCCATACAAAACCTTCCTTCTAGAACTCAACCGTCCGGCTTCAAATGCATCAATATGGATGTCCAGCAAACAGAAAACAATGACATAGATTCCATCTTAGAGCGCGATTCGGTCAGTCCGAAAGATGTATTGTTCGAGAACGACAAGCTCTACTTGGACAGGCTCAAGAGGTTCAAAAATAAGCGGCCTCTGTTAAGAGACGTGGCCAGACTGGAGAAATCGAAAGAGTTCTGGTGCAAAGAGTGCAACTATCTCACTACTGTGGAGGAGAGGTATCGGAAGCACATGAGCTACATGCACGTGCAGTCGATGGAGAAGGTGTGCAAGTATTGTTATAAGGAGTTCAAGAAGCTGTCCgatttgGTAAGACACGTCAGGACGCATACAGGAGAACGACCGTACGAATGCGAAAAGTGTCATAAAAAATTTTCACTAAAATCTACTTTGGAATCGCATCTCAGGACGCATAACATGGACGCGGCGACGAAGATATGCTGTGACGTGTGTAATTCGAATTTCACCACGAAATCTAGTCTTAAAGTACATATGTTGTTACATACAGGAGCGAGACCTCACACTTGCACGTTCTGCGAGCAAACGTTCCGAACGTCGGCGATCCGCAAAGCGCACGAAAGGAACATGCATCTGACCAAAAGCAAACAGACtgtgacgaacaaacccaagtcGGGACGTAGGCTTCTGAAATCGTTGGCCGAGGACGTGGCAAGCGGTTTCGGGAATGAGAAGGAAAGGGACGGTGCAGGTTTGACCGCGGAAACGGAGGGGGTATCCGTAATACAACCGACGTCGGAAGCGATCATTCTGGATTCCGGCCAAGACTCTGTCGCCATCGATCCCGTTATCCTCCTACAGAATCTCCAAAGTTCCGGCATTATACTGACCCCAGAGGATGGAGGACACGTGCCATTGAATTTAAGCGATATCGCACTATTAGACTATGAAAGCCTAAAAGGGGGAAATGacagtaatattaattttatagGTGATGTCGAAAACTTTCAATACGGCCATATCGGTAAAACGTTCGATCCGAATCGAGAAGAGCACGGCGGGAAAATCGGGTTCGCGTCGTCCAGCGATAACGACTACGAAAAGGCCGAACCGCCCCCGAGACAACAGAAAGTCGTCCAGAAAGTCGAGTGCGACATTTGTCACAAGATGTACGCGTCCAAGGACGTTCTGCGGAAGCATAAAAAGAACGTTCACGGACAGAATAAGAAGTTTCCTTGTATAAAATGTGATAAAGgttatgaCAGTCTAGAAGAATTAAACAAGCACATTGTCAAGTTACACACGGGGTACCGGCCGTATGCTTGCAACTATTGTGCCAATAGTTTTAGTGAAGAAAATAGTTTGAAGACACATATTAAAAGGATACATCAGAAGTCGCTGATCGCCCAGGAAACCACAAATGCCCTTTTGGGCCTTCAGTTTGATCTCCCGATGGTCCCATCGGATAGTTCCTTACTGTGA
Protein Sequence
MDSLNIIPESYELQGNVHNDLPMNITFINDLDSSSVSVQNYVIKHLDDGNLELVFCNNQDPNEERPELQDIIDAPSDYISQQNETVELNLNLNTRVKPNTIESRCVEVPVIRNFQKDSVIQHASAIPQLPKPPQTTTKATTPSKNSSNLIPIMSIPERILLNITIYSCFKCKEQFNSLTLFRQHLKWHKADKNFNCSKCTAGFNAENNLKIHMVTSHPGHHTDVCPICRIKFQRKASLKSHIMMHQVEEFFTCEECHGEFQNDDELLKHMEIHAITRVTKTLSDSLVCPYCKLDFETLAEYKRHVEKHVDVKRNILKGKKMRKKKKEKPGGYKCKYCSKFFSKSCLLDRHERIHTGERPYACTYCNRAFSQKGTLQIHLGSHTGVKPYSCTLCEAKFTQKGNLRAHIEKTHTAPKGNQKIYRCTQCPCIFRKVASLNGHITKVHIHQDAEETESENIIDKVMGSLKLLNSGLGKSVSKGDQLKTQAPPSPPKTAGTSSVRVAESLANGGIRRYLVRQKKIGDVRWYFCNFCSSRFKKPSDLIRHFRTHTLEKPYQCTKCKQAFSLKSTLLNHYKVHFSTACQCSRCDIRIRNPRTLDAHLRSHDTEVRTPNYVCLLCEDVFFTMEEGKRHRSVHDGEIQSTQNIIEPILKQPLYETTYGSLPLKPPKSKIPNTGAESSLERPHQCKGCGARFSRLMSLKRHLLYHSGERKFKCALCPKAFTTKYRLKEHTNYHKNIRNYPCATCGKKFVTSSLLKRHTIVHNNFKPYLCPYCNKHFKTLLLCRSHIKTVHKLKVYLENGEEGPEDTELMTNGLSDNTDHTMFSHSGKNTKEDTFQSKSHRTPAESTAVHTSQSSVMLSVAPHENQQESDPDYQMVYLNIDDLPLNNPDGVLGGNSLKIQNDSLLFNELRDSEALFNIEPNKSYMVDPNEVIQSTTISGYTTSSVISKVSQNTTNVGKLGDMATRRRGELDRCGNGGHGLGKDHADMSSMAGMGDLATGRPEIGLQEFSAMDLGGLPLSIIETEDTDTLSTSMANEEMNINPNDMFYDAQVICINCHKVFSDMNVFQKHACSQDPDATATDDLNLLIQNNDGENGHNNEVYSSIQNLPSRTQPSGFKCINMDVQQTENNDIDSILERDSVSPKDVLFENDKLYLDRLKRFKNKRPLLRDVARLEKSKEFWCKECNYLTTVEERYRKHMSYMHVQSMEKVCKYCYKEFKKLSDLVRHVRTHTGERPYECEKCHKKFSLKSTLESHLRTHNMDAATKICCDVCNSNFTTKSSLKVHMLLHTGARPHTCTFCEQTFRTSAIRKAHERNMHLTKSKQTVTNKPKSGRRLLKSLAEDVASGFGNEKERDGAGLTAETEGVSVIQPTSEAIILDSGQDSVAIDPVILLQNLQSSGIILTPEDGGHVPLNLSDIALLDYESLKGGNDSNINFIGDVENFQYGHIGKTFDPNREEHGGKIGFASSSDNDYEKAEPPPRQQKVVQKVECDICHKMYASKDVLRKHKKNVHGQNKKFPCIKCDKGYDSLEELNKHIVKLHTGYRPYACNYCANSFSEENSLKTHIKRIHQKSLIAQETTNALLGLQFDLPMVPSDSSLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-