Bpel029970.1
Basic Information
- Insect
- Barypeithes pellucidus
- Gene Symbol
- zfy1
- Assembly
- GCA_963991005.1
- Location
- OZ022562.1:12284288-12301153[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 25 0.25 22 7.1 0.7 1 21 9 29 9 30 0.93 2 25 5.2e-06 0.00047 21.8 0.8 2 23 55 77 55 77 0.95 3 25 8.7e-06 0.00078 21.1 4.1 1 23 86 109 86 109 0.97 4 25 0.0016 0.14 14.0 0.5 1 23 116 139 116 139 0.93 5 25 0.0044 0.39 12.6 0.9 2 23 146 168 145 168 0.96 6 25 0.00041 0.037 15.8 0.1 2 22 176 198 175 200 0.87 7 25 2.7e-06 0.00024 22.7 2.1 2 23 208 229 207 229 0.96 8 25 1.6e-05 0.0014 20.2 0.1 1 23 236 258 236 258 0.98 9 25 0.004 0.36 12.7 1.1 1 23 264 286 264 286 0.95 10 25 0.69 61 5.7 0.8 3 13 294 304 292 307 0.88 11 25 0.29 26 6.9 0.2 2 20 313 331 312 333 0.91 12 25 0.00018 0.016 17.0 2.0 1 23 371 394 371 394 0.92 13 25 0.00042 0.038 15.8 0.9 1 23 401 424 401 424 0.97 14 25 0.027 2.4 10.1 0.9 2 23 431 453 430 453 0.96 15 25 0.0013 0.12 14.2 1.1 1 23 460 485 460 485 0.97 16 25 0.38 34 6.5 7.0 1 23 492 514 492 514 0.96 17 25 0.093 8.3 8.4 1.0 2 22 538 558 537 558 0.94 18 25 0.00011 0.0094 17.7 0.4 2 23 612 634 611 634 0.94 19 25 0.018 1.6 10.7 0.3 1 23 643 666 643 666 0.97 20 25 0.0013 0.12 14.2 3.9 1 23 672 695 672 695 0.98 21 25 0.0013 0.12 14.3 0.3 3 23 705 727 703 727 0.92 22 25 0.0052 0.47 12.3 6.0 1 23 734 756 734 756 0.98 23 25 0.02 1.8 10.5 0.2 1 23 763 785 763 785 0.98 24 25 0.00043 0.039 15.8 0.2 1 23 791 813 791 813 0.95 25 25 3.8e-06 0.00034 22.2 0.4 1 23 819 842 819 842 0.95
Sequence Information
- Coding Sequence
- ATGCAACAAACAGAAGATACTTTATACCAGTGCGAATTCTGTCGATCCTCGTTTAAATTACGCAAAGCTTTAATATATCACGAAATGCGATGTTCTTCCACAAATAGATCGCCCCGAAAGTCCCCGAAAAAGCAAGAATGTGACGTGGCGGATGAGGATCGTTCGTGTCCGCAGTGCGGAAAAGTGTTCTCCAAGAAGCGCTACCTTACCAACCACCTGAACTACGTTCATAAACTAAAGCcacagaataaaatattttgttgtacGGAGTGCGACAAAAGCTTCACCagaaattttactttaaaagaTCACATTAATAAAGTTCACAGGGGACTGGTGGAATTTCACCAGTGCGATATATGTGGCGAGAAATTCAAGGGAAAAATAAACATTGAAAATCATAAGAACGCTGTACATTTCAAAAGATTCAAGATTCACTGTGAATTTTGCGGTAAAGGTTTTCTTTACGAGAGCGGTTTAAACCAGCACATTAAAACGACGCACGAAGAACGGATCACCATTATTCCCTGCCCTGAAGAAGGATGCgataaaacgtttaaaacaaAAGAAGCTTTAAAGTATCACAAGGACGCTGCACACGCCAAAGTTAAACTTAAACTCGTTTGTGAGCAATGCGGAAAAACATTTACCCACCCTTATTTATACACAAAACACCTGAGATATCACAGGAAAGGTCCCCCCATGTACCCATGTGGTATCTGTGATAAAGTCGTGACGAGTCTGGGAAGTTTCAAGGATCACATGCGTAGCCACACCGGCGAAAGGCCGTTTATTTGTGATCAATGCGGACAAGGGTTCCATGCAAAAAAACATTTGACAGCGCATGTGGTGGTGCACACCAAGGAGCGACCTTTTGGCTGTAAGGTCTGTGATAAAAGtttttattctcACGACCGCTGGTGCGAAGATGCTCAGGAATGCCAACTGTGCAAGAAACTATTTCCCTCCAATTTGGCTTTGCTTAGGCACAATCTAACCTGCGATCCAACGGGCATGTTCAAAAAATGCTCCATTTGcaaaaaattcatcaaaaaggATAAATACGATCGACACGTGGTGTGGCACAAGGTTAAAAGGAAACAGCAAATACACGCGTGCGACACCTGCGGAAAGACCTTCAAAAGTCAGCAATATTTGAGGCTGCATAGCGAGAGGGTCCATGAAAACAAGGGGGTGCAGTACCCTTGTGACGTATGCGGTAAGAACTTCTCGACGAAGTACCGCGCCGAGTACCACAAAAAGACGATTCACCTCAAGGACTTCAATCTCCATTGCGAGCAGTGCGGTAGAGGTTTCCTCTACCTCACAGAACTCACTACGCACGTTCGAAAAGTTCACGATAAGGAAGTGAAtatttttgtgtgcaccgcagAAAACTGCAGGAGGCATTTCCGGTCCAATGCCGCCCTTCAATACCATTTACAGACCGGCCATGCGCAGGAAAAACCGGAATACGTATGTATCCACTGCCAAAAAGCTTTCCATCATATTTCCCTGTATAAAAGACATTTAAGTAGACATACGAACCCCAAAAGGTTAAAACTTCAACCAACAAGGATATTTATAAAACGAAGTAAAAGACTGATAAACCAATGCTTACAGTGTAAAAAGCAGTTTCCAAGCAAGGAAATTCTACGGCGTCATAGCCGTACTTGTTCGCTAAGGGAatgttatttatgtaaaaaattaatcgaCGTGGAGAAATATCGTAACCATCTTATTTTCCATCAGTTGAAAGCAAGAATTGACAAGGAAATAGCTGAAAACCCggaaccaaaaataaaattaaggcgAACGGACCCGGCATCGTTAGAGTGTGATATTTGTCAAAAAGTTTTCCCTAGAAAAGATGCACTTGTCACTCACAAAACGCGAAAGCACGTCGACAAAGCTAAAAGAACACACTATCAATGCGACATGTGTGGACAGATGTTTTTGGATAAAAGCAGAGTAGACTCCCACATTAAACGAGCTCACCTGAAAGAGTTTAAATATCAGTGCCAGCATTGTGGAAAAGGCTGTATTTTCTTGGGTGAATTGAATCATCACGTGAAGAGCGTCCACAATAAGGAGGATGTTACGCTTATAGCATGTACTTACGAGAACTGTAACAAAGCATTCAGAACTCAAGGCGCCTTAAAGTACCATTTGTACAACCACCTGGAAAACAAGCCAACCTTCACGTGTGAGCAATGCGGGAAGGTTTTTAATCATCCACATCTTCACTCTAGACACGTACGATCTCACAAGGTCGAACGTAAAATGTACATGTGTAATATCTGTGATAAAGAAATGACTTCTATAAAGAGTTGGGAGGATCATCTGCGATTGCATAGTGGGGAACGGCCTTTTATTTGCGAGCATTGTGGACGGGGCTTTAGAACCAGGTCGATTTTGGCCGCTCACTTGGTTGTTCACACGCGAGTCAAAAATCACGTTTGTAAAGTGTGTGGGAAAGCCTTCACTCAGAGAAGCCCTCTTAAGGCTCATATTGTTAAAGTTCATCCAGATgtagaaaatatataa
- Protein Sequence
- MQQTEDTLYQCEFCRSSFKLRKALIYHEMRCSSTNRSPRKSPKKQECDVADEDRSCPQCGKVFSKKRYLTNHLNYVHKLKPQNKIFCCTECDKSFTRNFTLKDHINKVHRGLVEFHQCDICGEKFKGKINIENHKNAVHFKRFKIHCEFCGKGFLYESGLNQHIKTTHEERITIIPCPEEGCDKTFKTKEALKYHKDAAHAKVKLKLVCEQCGKTFTHPYLYTKHLRYHRKGPPMYPCGICDKVVTSLGSFKDHMRSHTGERPFICDQCGQGFHAKKHLTAHVVVHTKERPFGCKVCDKSFYSHDRWCEDAQECQLCKKLFPSNLALLRHNLTCDPTGMFKKCSICKKFIKKDKYDRHVVWHKVKRKQQIHACDTCGKTFKSQQYLRLHSERVHENKGVQYPCDVCGKNFSTKYRAEYHKKTIHLKDFNLHCEQCGRGFLYLTELTTHVRKVHDKEVNIFVCTAENCRRHFRSNAALQYHLQTGHAQEKPEYVCIHCQKAFHHISLYKRHLSRHTNPKRLKLQPTRIFIKRSKRLINQCLQCKKQFPSKEILRRHSRTCSLRECYLCKKLIDVEKYRNHLIFHQLKARIDKEIAENPEPKIKLRRTDPASLECDICQKVFPRKDALVTHKTRKHVDKAKRTHYQCDMCGQMFLDKSRVDSHIKRAHLKEFKYQCQHCGKGCIFLGELNHHVKSVHNKEDVTLIACTYENCNKAFRTQGALKYHLYNHLENKPTFTCEQCGKVFNHPHLHSRHVRSHKVERKMYMCNICDKEMTSIKSWEDHLRLHSGERPFICEHCGRGFRTRSILAAHLVVHTRVKNHVCKVCGKAFTQRSPLKAHIVKVHPDVENI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -