Basic Information

Insect: Barypeithes pellucidus
Gene Symbol: clz9_24
Assembly: GCA_963991005.1
Location: OZ022559.1:43054616-43056793[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.9e-07 5.7e-05 24.1 0.1 2 39 16 53 15 59 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.9e-07	5.7e-05	24.1	0.1	2	39	16	53	15	59	0.87

Sequence Information

Coding Sequence: ATGCCGCGAAAACGTATTTTAAAGACAAATAGAGTGTCTATTGATGAGGCGAATATAAGACGCGCAATTATTAACGTTTTTAATGGGACATATTCAGAAAGACGGGCAGCGAGAGTTCATGATATAAAAAGATCAACGCTACAAAGCAGGATAAAGAAAGTTTTGAGCAAGCAAACGAAAGAAGAGTATCTAAGACGTAATGGAGAAAGAGCAGACGATTCAGGAAACGATAGTATCGATGAAGATTTTCCATACTCTAGTAAATACACAGTCAGACAAGTGTTTACTCATGATCAAGAGCTAGAGTTAGTCAAATATATCAAGAGATGCTCTGATATAAACTTTGGGCTTACTTTTCTTGATGTCCAGAAACTGGCATATCAGTATGCCATAGTCATACCTAACTCTAATATTCCACCTGAATGGCATGACGCACAACAGGCAAAGGAAGGGTGGAGGAGAGGATTTATGCAAAGGCACCAATCTCTGTCGCTACGTAAACCGGAAAGCACTAGTTTAAGCAGAAGCATTGCTTTCAATAAACATAAAGTGgatcaattttttgataactATAAATCGGTATTGGACCGATTTAAATTTCCaccggaaaaaatatttaacttggaTGAGACTGGTGTGGCGACTGTGTTGAAACCAGTGAAGGTAGTTACAACATGTGGTAAAAAACAAGTTTCACAGGTTGCTTCCGCAGAAAGGGGCGAATTAGTTACTTTTGTAGGAATAATAAATGCGGCAGGGCAGTCACTACCCCCTGTGTACCTCTTTCCTAGAATTAGGAATTTAGATGACTTCATGGTAGGTGCACCAGTTTCAAGCCTAGCATTAGGCAACAAATCAGGTTGGATGACAGCTGAAACATTTCCCTCTGTCCTAAAGCATATATTTACACAAACAAATTGTAGCGTAGATAACCCTATTCTAATTTTGCTTGACAATCATGAATCCCATGTGTCCTTAAATTGTGTTAAGTATTGCAAAGAAAATGGAATATGCATTCTGAGTTTTCCACCACACACCACACACCGACTTCAGCCACTCGATATAGGAATTTATGGACCATTTAAGACCTACTGCAGTGTCGCTTTTAATGATTGGCTGACGTCGAACCCCGGTAAAACCATTTCTGTCAAAAATATACCTAGCTTAACCAATCTTGCTTACCTAAAAGCTTTTTCTGCGAAAAACATTATCAGCAGTTTTAAAAAGCCTGGCATTTGGCCCTTAAACCGTTTAGCGTTTTCAGACGAAGACTTTGATTCCAGTTATGTTACTGACAAACCTCGGCCAGATAAAGATGTGCGAAATGTGGCAGAAGGAACACAGATGGAGAGTAATAAAACTGAAGATAAAAAGGTAATAGAGCAAATAAAGGAAACCACCACCGAAGAAGAAACTACAGATCAAAACTTGGAAGTACAAGTGATGGATATGTCACTCAaagacataaataaaaaatccgCCATTCTAAGTgacaattttaatgttttaaatacCCCCTCTTGCAGTGGTATAAAGacacatataaaaaataaaataactccaGAAGCTGTGCGCCCTTATCCAAAAGTAGAGAACAAACAGACTAAAACTAAGAGAGAACCAGGAAAGTCTAGAATTTATACAGACACTCCTGAGAAAGAAAGGCTCGAGGAACTAGAGGAAAGGAAGGccgtaaaaagaaaaaaagtagtCCGTAAAGTATTAAGTTCTAGTGAGTCAGCTACACTACACAGAAATTCGAAAAAACTCATCAAGAAACCTAGACTTCAACAAATAGAGTCTACTTCGAGCGAATCGGAAATTTCACTCAATGATCCCTCGGATGAAGATATTACCGAGGAATTAGAAAGTATTACAGAGTTGAGTGGTGATCAATTGAAAGAACATGATTTAGTACTTGTAAGATTTCCGGTTAAACAGACAATGATACACTTTGTGGGGAAAATTTTAAGTACTACTGATGCCAACcatactattaaatttttaagaagaaGAGGACTATCCTCTACATTTTACTTTCCAATCGTAGAAGACATTACCAAAGTGGATTATGATGATATCGTGGCCAAATTGACATCACCTTTGCGGTGTGGTACTGCAAGAACCTCTTCTTACTTTCAATTTTGCTATAACTTCGGAAATTTGGTAGTAAATTGA
Protein Sequence: MPRKRILKTNRVSIDEANIRRAIINVFNGTYSERRAARVHDIKRSTLQSRIKKVLSKQTKEEYLRRNGERADDSGNDSIDEDFPYSSKYTVRQVFTHDQELELVKYIKRCSDINFGLTFLDVQKLAYQYAIVIPNSNIPPEWHDAQQAKEGWRRGFMQRHQSLSLRKPESTSLSRSIAFNKHKVDQFFDNYKSVLDRFKFPPEKIFNLDETGVATVLKPVKVVTTCGKKQVSQVASAERGELVTFVGIINAAGQSLPPVYLFPRIRNLDDFMVGAPVSSLALGNKSGWMTAETFPSVLKHIFTQTNCSVDNPILILLDNHESHVSLNCVKYCKENGICILSFPPHTTHRLQPLDIGIYGPFKTYCSVAFNDWLTSNPGKTISVKNIPSLTNLAYLKAFSAKNIISSFKKPGIWPLNRLAFSDEDFDSSYVTDKPRPDKDVRNVAEGTQMESNKTEDKKVIEQIKETTTEEETTDQNLEVQVMDMSLKDINKKSAILSDNFNVLNTPSCSGIKTHIKNKITPEAVRPYPKVENKQTKTKREPGKSRIYTDTPEKERLEELEERKAVKRKKVVRKVLSSSESATLHRNSKKLIKKPRLQQIESTSSESEISLNDPSDEDITEELESITELSGDQLKEHDLVLVRFPVKQTMIHFVGKILSTTDANHTIKFLRRRGLSSTFYFPIVEDITKVDYDDIVAKLTSPLRCGTARTSSYFQFCYNFGNLVVN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -