Bpel011066.1
Basic Information
- Insect
- Barypeithes pellucidus
- Gene Symbol
- -
- Assembly
- GCA_963991005.1
- Location
- OZ022557.1:56049736-56050659[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-08 1.8e-06 28.9 0.1 3 37 17 51 15 57 0.91
Sequence Information
- Coding Sequence
- ATGGTTCGAACATATGTTCGAAAAACCGAACGACAACATTGGTCTTCCGAGTCAATGCATCAAGCTGTTCTTGCTGTTTTTAATCGTGAGATGGGATACAAAAAAGCAGCACAACAATTTAGTGTTCCCCAAACCACCTTAGAACGCTACGTTGCTAAAAAAAGGCAAGAaggtgaaaattttacaattgacAAAACGGTTGGAAAATTTCAGAAGGTGTTCACACAAGAACAGGAGTTAGAGTTAGTGCAATATTTAACAGATATGGAAGGTAAATTATTTGGCCTAACAATGACAGATTTTCGGAAGCTAGCCTATCAACTAGCTGTACGAAACAACTGCAATAATAGATTTAACTGCAATACCGAAATGGCCGGCCAGACATGGATGCAAGAATTTCTGAAGCGGCATCCTACGCTAACATTGAGAAAACCTGAAGCAACGTCTGGTGCACGGGCGATGGGCTTCAACAAAATTGCtgtagataatttttttctacttcTAACTGAGACGATCGATGCCCATAAGTTAACAGGTGACAGAATATACAATTGTGATGAAACTGGTGTGACGGTTAACCCAAAATGTCAGAGTAGAATATTGGCTCCAAGAGGAAAACGTCAAGTGGGGATCATTAATCCTTCAGAAAGAGGACAGACAGTTACGGCAGAAATTTGTGTTTCTGCGGCAGGTAACTACATTCCACCCTCATTAATATTTCCTAGGATTCGAAAACAACCTACTTTCGAGCTTGGTCTACTTCCCGGATCCACTGTTTACAATAACGGATCTGGATGGATGACAACTGAAATTTTTCTGGAATGGTTTAAgaattttgttaatatctctatAGAGCAACGAGAGATAATAAAGTGTTACTATTATTGGATGGACATTCGACTCATACGAAAAACATCCAACTAA
- Protein Sequence
- MVRTYVRKTERQHWSSESMHQAVLAVFNREMGYKKAAQQFSVPQTTLERYVAKKRQEGENFTIDKTVGKFQKVFTQEQELELVQYLTDMEGKLFGLTMTDFRKLAYQLAVRNNCNNRFNCNTEMAGQTWMQEFLKRHPTLTLRKPEATSGARAMGFNKIAVDNFFLLLTETIDAHKLTGDRIYNCDETGVTVNPKCQSRILAPRGKRQVGIINPSERGQTVTAEICVSAAGNYIPPSLIFPRIRKQPTFELGLLPGSTVYNNGSGWMTTEIFLEWFKNFVNISIEQREIIKCYYYWMDIRLIRKTSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00196039;
- 90% Identity
- iTF_00196039; iTF_00196024;
- 80% Identity
- iTF_00196024;